Genomic map of Staphylococcus phage SA97 (NC_029010)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029010
Definition
Staphylococcus phage SA97, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus; unclassified Phietavirus.
DB of origin
REFSEQ
Length
40592
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
34.24
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009218421.1 NC_029010_p11 terminase larget subunit phrog_2 terminase large subunit head and packaging 1 4619 5914
YP_009218458.1 NC_029010_p48 hypothetical protein phrog_2305 unknown function unknown function 1 37504 37953
YP_009218443.1 NC_029010_p33 tail fiber protein phrog_1125 tail fiber protein tail 1 26557 27795
YP_009218444.1 NC_029010_p34 hypothetical protein phrog_1262 unknown function unknown function 1 27801 28196
YP_009218441.1 NC_029010_p31 hypothetical protein phrog_276 unknown function unknown function 1 24210 24509
YP_009218430.1 NC_029010_p20 head protein phrog_176 tail terminator connector 1 11733 12116
YP_009218419.1 NC_029010_p9 transcriptional activator RinA phrog_36 transcriptional regulator transcription regulation 1 3512 3934
YP_009218461.1 NC_029010_p51 hypothetical protein phrog_401 unknown function unknown function 1 38743 39003
YP_009218459.1 NC_029010_p49 hypothetical protein phrog_989 unknown function unknown function 1 37967 38188
YP_009218440.1 NC_029010_p30 hypothetical protein phrog_134 unknown function unknown function 1 23997 24170
YP_009218460.1 NC_029010_p50 hypothetical protein phrog_983 unknown function unknown function 1 38436 38738
YP_009218446.1 NC_029010_p36 amidase phrog_489 endolysin lysis 1 28514 29926
YP_009218429.1 NC_029010_p19 structural protein phrog_5 tail completion or Neck1 protein connector 1 11374 11721
YP_009218435.1 NC_029010_p25 minor phage tail protein phrog_33 distal tail protein Dit tail 1 17014 17961
YP_009218439.1 NC_029010_p29 hypothetical protein phrog_300 tail fiber protein tail 1 23616 23993
YP_009218426.1 NC_029010_p16 major capsid protein phrog_10 major head protein head and packaging 1 9451 10425
YP_009218445.1 NC_029010_p35 holin phrog_263 holin lysis 1 28252 28527
YP_009218456.1 NC_029010_p46 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 36472 37239
YP_009218425.1 NC_029010_p15 capsid protein phrog_172 head scaffolding protein head and packaging 1 8817 9437
YP_009218424.1 NC_029010_p14 hypothetical protein phrog_1431 unknown function unknown function 1 8538 8708
YP_009218436.1 NC_029010_p26 endopeptidase tail protein phrog_663 minor head protein head and packaging 1 17970 19868
YP_009218447.1 NC_029010_p37 hypothetical protein phrog_6149 unknown function unknown function -1 29986 30543
YP_009218455.1 NC_029010_p45 antirepressor phrog_3 transcriptional repressor transcription regulation 1 36278 36472
YP_009218417.1 NC_029010_p7 hypothetical protein phrog_278 transcriptional regulator transcription regulation 1 2578 2784
YP_009218418.1 NC_029010_p8 transcriptional activator RinB phrog_152 RinB-like transcriptional activator transcription regulation 1 3168 3341
YP_009218432.1 NC_029010_p22 hypothetical protein phrog_183 tail chaperone protein tail 1 12778 13143
YP_009218412.1 NC_029010_p2 hypothetical protein phrog_1709 unknown function unknown function 1 187 492
YP_009218415.1 NC_029010_p5 hypothetical protein phrog_742 acetyltransferase other 1 1270 1602
YP_009218452.1 NC_029010_p42 hypothetical protein phrog_888 unknown function unknown function -1 34239 34964
YP_009218437.1 NC_029010_p27 minor structural protein phrog_287 minor tail protein tail 1 19883 21793
YP_009218433.1 NC_029010_p23 hypothetical protein phrog_441 tail assembly chaperone tail 1 13173 13517
YP_009218434.1 NC_029010_p24 tape measure protein phrog_58 tail length tape measure protein tail 1 13534 17001
YP_009218416.1 NC_029010_p6 dUTP pyrophosphatase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 2011 2541
YP_009218423.1 NC_029010_p13 head morphogenesis protein phrog_115 minor head protein head and packaging 1 7470 8465
YP_009218413.1 NC_029010_p3 hypothetical protein phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 620 976
YP_009218463.1 NC_029010_p53 single-stranded DNA-binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 39553 40203
YP_009218449.1 NC_029010_p39 transcriptional regulator phrog_1529 unknown function unknown function 1 31253 31438
YP_009218442.1 NC_029010_p32 cell wall hydrolase/mannosyl-glycoprotein endo-beta-N-acetylglucosminidase phrog_759 tail associated cell-wall hydrolase other 1 24646 26544
YP_009218414.1 NC_029010_p4 hypothetical protein phrog_258 virulence associated other 1 980 1222
YP_009218448.1 NC_029010_p38 hypothetical protein phrog_4761 unknown function unknown function 1 30918 31070
YP_009218453.1 NC_029010_p43 hypothetical protein phrog_1914 unknown function unknown function -1 34992 35666
YP_009218451.1 NC_029010_p41 hypothetical protein phrog_13276 unknown function unknown function -1 33302 34207
YP_009218431.1 NC_029010_p21 major tail protein phrog_238 major tail protein tail 1 12135 12716
YP_009218428.1 NC_029010_p18 head-tail adapter protein phrog_132 head-tail adaptor connector 1 10743 11075
YP_009218450.1 NC_029010_p40 integrase phrog_1 integrase integration and excision -1 32004 33053
YP_009218411.1 NC_029010_p1 hypothetical protein phrog_299 unknown function unknown function 1 1 186
YP_009218420.1 NC_029010_p10 terminase small subunit phrog_51 terminase small subunit head and packaging 1 4122 4616
YP_009218462.1 NC_029010_p52 hypothetical protein phrog_2205 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 39016 39552
YP_009218422.1 NC_029010_p12 portal protein phrog_64 portal protein head and packaging 1 5925 7463
YP_009218427.1 NC_029010_p17 hypothetical protein phrog_390 Arc-like repressor transcription regulation 1 10447 10734
YP_009218464.1 NC_029010_p54 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 40200 40550
YP_009218438.1 NC_029010_p28 tail protein phrog_257 minor tail protein tail 1 21793 23616
YP_009218457.1 NC_029010_p47 hypothetical protein phrog_1796 unknown function unknown function 1 37240 37464
YP_009218454.1 NC_029010_p44 transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 35683 36015