Genomic map of Sulfolobus monocaudavirus SMV2 (NC_029020)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029020
Definition
Sulfolobus monocaudavirus SMV2, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Bicaudaviridae; unclassified Bicaudaviridae.
DB of origin
REFSEQ
Length
50918
Host Name
Sulfolobus
Host domain
Archaea
Is prophage?
undef
Number of proteins
65
%GC
43.55
Number of singletons
25
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009219222.1 NC_029020_p7 hypothetical protein phrog_21133 unknown function unknown function 1 3766 4095
YP_009219248.1 NC_029020_p33 hypothetical protein singleton unknown function unknown function -1 32960 33268
YP_009219235.1 NC_029020_p20 hypothetical protein phrog_21364 unknown function unknown function -1 22496 22861
YP_009219244.1 NC_029020_p29 hypothetical protein phrog_19866 unknown function unknown function -1 30879 31397
YP_009219225.1 NC_029020_p10 hypothetical protein singleton unknown function unknown function 1 10240 10377
YP_009219245.1 NC_029020_p30 hypothetical protein phrog_21619 unknown function unknown function -1 31397 32023
YP_009219229.1 NC_029020_p14 endo-1,4-beta-xylanase A precursor phrog_25750 unknown function unknown function -1 16238 17647
YP_009219238.1 NC_029020_p23 MoxR-like ATPase phrog_20895 ATPase other -1 25668 27428
YP_009219231.1 NC_029020_p16 hypothetical protein singleton unknown function unknown function -1 19220 19978
YP_009219269.1 NC_029020_p54 hypothetical protein singleton unknown function unknown function 1 45935 46168
YP_009219267.1 NC_029020_p52 hypothetical protein singleton unknown function unknown function 1 44794 45360
YP_009219240.1 NC_029020_p25 hypothetical protein phrog_21437 membrane protein moron, auxiliary metabolic gene and host takeover 1 28191 29246
YP_009219252.1 NC_029020_p37 hypothetical protein singleton unknown function unknown function -1 35248 35541
YP_009219237.1 NC_029020_p22 hypothetical protein phrog_21755 unknown function unknown function -1 23783 25654
YP_009219242.1 NC_029020_p27 hypothetical protein phrog_17634 unknown function unknown function 1 29940 30194
YP_009219275.1 NC_029020_p60 dolichol-phosphate mannosyltransferase phrog_841 GtrB-like O-antigen conversion moron, auxiliary metabolic gene and host takeover 1 48128 48736
YP_009219265.1 NC_029020_p50 hypothetical protein singleton unknown function unknown function -1 44188 44382
YP_009219230.1 NC_029020_p15 hypothetical protein phrog_11364 transmembrane protein other -1 17710 19176
YP_009219251.1 NC_029020_p36 hypothetical protein phrog_9208 integrase integration and excision -1 34362 35093
YP_009219217.1 NC_029020_p2 hypothetical protein singleton unknown function unknown function 1 840 1154
YP_009219233.1 NC_029020_p18 hypothetical protein phrog_9172 unknown function unknown function -1 20544 22058
YP_009219226.1 NC_029020_p11 hypothetical protein phrog_8969 unknown function unknown function 1 10572 15263
YP_009219279.1 NC_029020_p64 hypothetical protein phrog_876 transcriptional repressor transcription regulation 1 50282 50614
YP_009219243.1 NC_029020_p28 hypothetical protein phrog_13733 unknown function unknown function -1 30208 30867
YP_009219258.1 NC_029020_p43 hypothetical protein phrog_24726 unknown function unknown function 1 38626 39015
YP_009219256.1 NC_029020_p41 hypothetical protein singleton unknown function unknown function -1 37523 38041
YP_009219255.1 NC_029020_p40 hypothetical protein phrog_18276 unknown function unknown function -1 36939 37349
YP_009219278.1 NC_029020_p63 hypothetical protein singleton unknown function unknown function 1 49943 50218
YP_009219232.1 NC_029020_p17 hypothetical protein phrog_21977 unknown function unknown function -1 20003 20467
YP_009219249.1 NC_029020_p34 hypothetical protein singleton unknown function unknown function 1 33378 33806
YP_009219266.1 NC_029020_p51 hypothetical protein phrog_7928 unknown function unknown function -1 44379 44687
YP_009219271.1 NC_029020_p56 hypothetical protein singleton unknown function unknown function -1 46676 46981
YP_009219221.1 NC_029020_p6 hypothetical protein phrog_22665 unknown function unknown function 1 3507 3764
YP_009219277.1 NC_029020_p62 hypothetical protein singleton unknown function unknown function 1 49294 49842
YP_009219223.1 NC_029020_p8 hypothetical protein singleton unknown function unknown function 1 4142 5737
YP_009219280.1 NC_029020_p65 hypothetical protein phrog_19796 unknown function unknown function 1 50691 50909
YP_009219246.1 NC_029020_p31 hypothetical protein phrog_20716 unknown function unknown function -1 32038 32451
YP_009219224.1 NC_029020_p9 massive surface protein MspC singleton unknown function unknown function 1 5778 10268
YP_009219259.1 NC_029020_p44 hypothetical protein phrog_19561 unknown function unknown function -1 39273 40196
YP_009219264.1 NC_029020_p49 hypothetical protein phrog_19214 unknown function unknown function -1 43614 44165
YP_009219220.1 NC_029020_p5 hypothetical protein phrog_10676 major head protein head and packaging 1 3070 3438
YP_009219272.1 NC_029020_p57 hypothetical protein phrog_35756 unknown function unknown function -1 47044 47442
YP_009219227.1 NC_029020_p12 hypothetical protein phrog_14391 major head protein head and packaging 1 15332 15679
YP_009219276.1 NC_029020_p61 hypothetical protein phrog_20795 unknown function unknown function 1 48741 49304
YP_009219239.1 NC_029020_p24 hypothetical protein phrog_20158 unknown function unknown function 1 27417 28187
YP_009219253.1 NC_029020_p38 PUA-PAPS reductase-like fusion protein phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover -1 35632 36423
YP_009219218.1 NC_029020_p3 hypothetical protein singleton unknown function unknown function 1 1180 1374
YP_009219228.1 NC_029020_p13 hypothetical protein phrog_20225 unknown function unknown function 1 15737 16234
YP_009219219.1 NC_029020_p4 hypothetical protein phrog_20664 unknown function unknown function 1 1467 2999
YP_009219257.1 NC_029020_p42 hypothetical protein phrog_17954 unknown function unknown function 1 38187 38492
YP_009219262.1 NC_029020_p47 hypothetical protein singleton unknown function unknown function 1 41171 41737
YP_009219261.1 NC_029020_p46 hypothetical protein singleton unknown function unknown function -1 40746 40976
YP_009219260.1 NC_029020_p45 hypothetical protein singleton unknown function unknown function -1 40331 40552
YP_009219250.1 NC_029020_p35 hypothetical protein singleton unknown function unknown function 1 33793 34320
YP_009219234.1 NC_029020_p19 hypothetical protein singleton unknown function unknown function -1 22065 22496
YP_009219274.1 NC_029020_p59 hypothetical protein singleton unknown function unknown function 1 47879 48049
YP_009219273.1 NC_029020_p58 hypothetical protein singleton unknown function unknown function -1 47654 47821
YP_009219263.1 NC_029020_p48 hypothetical protein phrog_25834 unknown function unknown function 1 42308 43159
YP_009219247.1 NC_029020_p32 hypothetical protein phrog_18874 unknown function unknown function -1 32458 32721
YP_009219254.1 NC_029020_p39 hypothetical protein singleton unknown function unknown function -1 36404 36865
YP_009219268.1 NC_029020_p53 hypothetical protein phrog_36495 unknown function unknown function 1 45759 45899
YP_009219241.1 NC_029020_p26 hypothetical protein phrog_16502 unknown function unknown function 1 29233 29892
YP_009219236.1 NC_029020_p21 hypothetical protein phrog_16992 unknown function unknown function 1 22982 23755
YP_009219270.1 NC_029020_p55 hypothetical protein phrog_13045 unknown function unknown function 1 46234 46512
YP_009219216.1 NC_029020_p1 hypothetical protein singleton unknown function unknown function 1 241 420