| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_029021 |
Definition |
Enterobacteria phage JenK1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nonagvirus. |
DB of origin |
REFSEQ |
Length |
60747 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
43.86 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009219330.1 | NC_029021_p50 | hypothetical protein | phrog_20894 | unknown function | unknown function | -1 | 44956 | 45231 |
| YP_009219322.1 | NC_029021_p42 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 39963 | 40709 |
| YP_009219286.1 | NC_029021_p6 | hypothetical protein | phrog_18016 | unknown function | unknown function | 1 | 5968 | 6402 |
| YP_009219293.1 | NC_029021_p13 | phage tail subunit | phrog_290 | minor tail protein | tail | 1 | 9249 | 10430 |
| YP_009219294.1 | NC_029021_p14 | hypothetical protein | phrog_569 | tail length tape measure protein | tail | 1 | 10471 | 10899 |
| YP_009219357.1 | NC_029021_p77 | hypothetical protein | phrog_21152 | unknown function | unknown function | 1 | 56980 | 57318 |
| YP_009219282.1 | NC_029021_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 521 | 2119 |
| YP_009219303.1 | NC_029021_p23 | tail fiber assembly protein | phrog_7290 | tail fiber assembly protein | tail | 1 | 23328 | 23618 |
| YP_009219312.1 | NC_029021_p32 | GTP cyclohydrolase I / queuosine biosynthesis protein FolE | phrog_2197 | GTP cyclohydrolase | other | -1 | 30137 | 30751 |
| YP_009219284.1 | NC_029021_p4 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 3778 | 4668 |
| YP_009219328.1 | NC_029021_p48 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | -1 | 43650 | 44159 |
| YP_009219345.1 | NC_029021_p65 | hypothetical protein | phrog_16944 | unknown function | unknown function | -1 | 51551 | 51820 |
| YP_009219344.1 | NC_029021_p64 | hypothetical protein | phrog_17615 | unknown function | unknown function | -1 | 51201 | 51551 |
| YP_009219348.1 | NC_029021_p68 | hypothetical protein | phrog_3199 | unknown function | unknown function | -1 | 53481 | 53729 |
| YP_009219326.1 | NC_029021_p46 | hypothetical protein | phrog_2480 | unknown function | unknown function | -1 | 42826 | 43251 |
| YP_009219300.1 | NC_029021_p20 | tail fiber protein | phrog_31 | central tail fiber J | tail | 1 | 16130 | 19258 |
| YP_009219314.1 | NC_029021_p34 | glutamine amidotransferases class-II (GATase) / queuosine biosynthesis QueC ATPase | phrog_10428 | L-glutamine-D-fructose-6-phosphate aminotransferase | other | -1 | 31313 | 32728 |
| YP_009219281.1 | NC_029021_p1 | terminase small subunit | phrog_5334 | terminase small subunit | head and packaging | 1 | 1 | 552 |
| YP_009219308.1 | NC_029021_p28 | hypothetical protein | phrog_7239 | unknown function | unknown function | 1 | 25803 | 26072 |
| YP_009219288.1 | NC_029021_p8 | hypothetical protein | phrog_17875 | unknown function | unknown function | 1 | 7152 | 7481 |
| YP_009219336.1 | NC_029021_p56 | hypothetical protein | phrog_17339 | protease | other | -1 | 46426 | 46704 |
| YP_009219323.1 | NC_029021_p43 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 40774 | 41721 |
| YP_009219339.1 | NC_029021_p59 | hypothetical protein | phrog_19703 | unknown function | unknown function | -1 | 49621 | 49857 |
| YP_009219297.1 | NC_029021_p17 | hypothetical protein | phrog_1302 | distal tail protein | tail | 1 | 14545 | 15135 |
| YP_009219287.1 | NC_029021_p7 | hypothetical protein | phrog_10966 | unknown function | unknown function | 1 | 6475 | 7143 |
| YP_009219317.1 | NC_029021_p37 | hypothetical protein | phrog_11298 | unknown function | unknown function | -1 | 34359 | 35183 |
| YP_009219352.1 | NC_029021_p72 | hypothetical protein | phrog_5461 | unknown function | unknown function | -1 | 54511 | 54696 |
| YP_009219285.1 | NC_029021_p5 | capsid protein | phrog_247 | major head protein | head and packaging | 1 | 4807 | 5910 |
| YP_009219356.1 | NC_029021_p76 | hypothetical protein | phrog_17838 | unknown function | unknown function | 1 | 56615 | 56980 |
| YP_009219333.1 | NC_029021_p53 | hypothetical protein | phrog_18974 | unknown function | unknown function | -1 | 45712 | 45936 |
| YP_009219332.1 | NC_029021_p52 | hypothetical protein | phrog_2993 | unknown function | unknown function | -1 | 45404 | 45643 |
| YP_009219338.1 | NC_029021_p58 | DNA primase/helicase | phrog_3022 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 47062 | 49611 |
| YP_009219295.1 | NC_029021_p15 | hypothetical protein | phrog_4966 | unknown function | unknown function | 1 | 10944 | 11282 |
| YP_009219359.1 | NC_029021_p79 | hypothetical protein | phrog_17085 | unknown function | unknown function | 1 | 57762 | 58115 |
| YP_009219362.1 | NC_029021_p82 | hypothetical protein | phrog_19774 | unknown function | unknown function | 1 | 58791 | 59018 |
| YP_009219296.1 | NC_029021_p16 | tail length tape measure protein | phrog_339 | tail length tape measure protein | tail | 1 | 11282 | 14542 |
| YP_009219334.1 | NC_029021_p54 | hypothetical protein | phrog_35106 | unknown function | unknown function | -1 | 45954 | 46175 |
| YP_009219331.1 | NC_029021_p51 | hypothetical protein | phrog_11457 | unknown function | unknown function | -1 | 45228 | 45407 |
| YP_009219291.1 | NC_029021_p11 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 8363 | 8782 |
| YP_009219316.1 | NC_029021_p36 | queuosine Biosynthesis QueE Radical SAM | phrog_2076 | QueE-like radical SAM domain | moron, auxiliary metabolic gene and host takeover | -1 | 33526 | 34290 |
| YP_009219325.1 | NC_029021_p45 | RNAse H | phrog_531 | Rnase H | DNA, RNA and nucleotide metabolism | -1 | 42235 | 42825 |
| YP_009219298.1 | NC_029021_p18 | hypothetical protein | phrog_2048 | tail protein | tail | 1 | 15136 | 15720 |
| YP_009219319.1 | NC_029021_p39 | helicase-like protein | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 36023 | 38026 |
| YP_009219306.1 | NC_029021_p26 | hypothetical protein | phrog_9157 | unknown function | unknown function | 1 | 24876 | 25241 |
| YP_009219292.1 | NC_029021_p12 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 8779 | 9246 |
| YP_009219361.1 | NC_029021_p81 | hypothetical protein | phrog_12090 | unknown function | unknown function | 1 | 58603 | 58794 |
| YP_009219305.1 | NC_029021_p25 | hypothetical protein | phrog_9288 | unknown function | unknown function | 1 | 24100 | 24813 |
| YP_009219283.1 | NC_029021_p3 | structural protein | phrog_145 | portal protein | head and packaging | 1 | 2132 | 3658 |
| YP_009219301.1 | NC_029021_p21 | hypothetical protein | phrog_2243 | unknown function | unknown function | -1 | 19289 | 19579 |
| YP_009219342.1 | NC_029021_p62 | hypothetical protein | phrog_18528 | unknown function | unknown function | -1 | 50617 | 50832 |
| YP_009219321.1 | NC_029021_p41 | hypothetical protein | phrog_6015 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39040 | 39963 |
| YP_009219302.1 | NC_029021_p22 | tail fiber protein | phrog_295 | tail fiber protein | tail | 1 | 19666 | 23328 |
| YP_009219366.1 | NC_029021_p86 | hypothetical protein | phrog_16688 | unknown function | unknown function | 1 | 60382 | 60618 |
| YP_009219360.1 | NC_029021_p80 | hypothetical protein | phrog_1040 | peptidase HslV family | other | 1 | 58112 | 58606 |
| YP_009219353.1 | NC_029021_p73 | hypothetical protein | phrog_17772 | unknown function | unknown function | -1 | 54775 | 55254 |
| YP_009219311.1 | NC_029021_p31 | hypothetical protein | phrog_887 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 29114 | 30067 |
| YP_009219289.1 | NC_029021_p9 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 7489 | 7992 |
| YP_009219327.1 | NC_029021_p47 | hypothetical protein | phrog_32702 | unknown function | unknown function | -1 | 43261 | 43578 |
| YP_009219365.1 | NC_029021_p85 | hypothetical protein | phrog_785 | holin | lysis | 1 | 60071 | 60379 |
| YP_009219290.1 | NC_029021_p10 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 7989 | 8363 |
| YP_009219340.1 | NC_029021_p60 | hypothetical protein | phrog_17122 | unknown function | unknown function | -1 | 49932 | 50330 |
| YP_009219358.1 | NC_029021_p78 | hypothetical protein | phrog_4049 | unknown function | unknown function | 1 | 57318 | 57758 |
| YP_009219320.1 | NC_029021_p40 | hypothetical protein | phrog_1990 | Cas4-domain exonuclease | DNA, RNA and nucleotide metabolism | -1 | 38027 | 38977 |
| YP_009219324.1 | NC_029021_p44 | homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 41718 | 42248 |
| YP_009219355.1 | NC_029021_p75 | hypothetical protein | phrog_21392 | unknown function | unknown function | 1 | 56242 | 56529 |
| YP_009219364.1 | NC_029021_p84 | hypothetical protein | phrog_873 | endolysin | head and packaging | 1 | 59623 | 60057 |
| YP_009219299.1 | NC_029021_p19 | hypothetical protein | phrog_2134 | unknown function | unknown function | 1 | 15695 | 16129 |
| YP_009219350.1 | NC_029021_p70 | hypothetical protein | phrog_18706 | unknown function | unknown function | -1 | 54085 | 54249 |
| YP_009219329.1 | NC_029021_p49 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 44308 | 44769 |
| YP_009219313.1 | NC_029021_p33 | 6-carboxytetrahydropterin synthase | phrog_2389 | QueD-like 6-pyruvoyl-tetrahydropterin synthase | moron, auxiliary metabolic gene and host takeover | -1 | 30778 | 31311 |
| YP_009219304.1 | NC_029021_p24 | tail fiber assembly protein | phrog_3792 | tail assembly chaperone | tail | 1 | 23645 | 23905 |
| YP_009219354.1 | NC_029021_p74 | hypothetical protein | phrog_13865 | unknown function | unknown function | -1 | 55331 | 55636 |
| YP_009219337.1 | NC_029021_p57 | hypothetical protein | phrog_17131 | unknown function | unknown function | 1 | 46803 | 47033 |
| YP_009219347.1 | NC_029021_p67 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52503 | 52637 |
| YP_009219309.1 | NC_029021_p29 | DNA polymerase B region | phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 26143 | 28116 |
| YP_009219307.1 | NC_029021_p27 | hypothetical protein | phrog_8329 | unknown function | unknown function | 1 | 25258 | 25806 |
| YP_009219335.1 | NC_029021_p55 | hypothetical protein | phrog_9346 | unknown function | unknown function | -1 | 46211 | 46408 |
| YP_009219343.1 | NC_029021_p63 | hypothetical protein | phrog_1972 | unknown function | unknown function | -1 | 50825 | 51211 |
| YP_009219315.1 | NC_029021_p35 | hypothetical protein | phrog_18443 | unknown function | unknown function | -1 | 32730 | 33491 |
| YP_009219349.1 | NC_029021_p69 | hypothetical protein | phrog_13865 | unknown function | unknown function | -1 | 53759 | 54016 |
| YP_009219346.1 | NC_029021_p66 | hypothetical protein | phrog_18014 | unknown function | unknown function | -1 | 51822 | 52442 |
| YP_009219351.1 | NC_029021_p71 | hypothetical protein | phrog_3199 | unknown function | unknown function | -1 | 54260 | 54505 |
| YP_009219363.1 | NC_029021_p83 | lysin | phrog_312 | Rz-like spanin | lysis | 1 | 59000 | 59500 |
| YP_009219318.1 | NC_029021_p38 | hypothetical protein | phrog_7864 | unknown function | unknown function | -1 | 35280 | 36002 |
| YP_009219310.1 | NC_029021_p30 | hypothetical protein | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 28113 | 29105 |
| YP_009219341.1 | NC_029021_p61 | hypothetical protein | phrog_5321 | unknown function | unknown function | -1 | 50345 | 50614 |