| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_029023 |
Definition |
Escherichia phage JH2, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Felixounavirus. |
DB of origin |
REFSEQ |
Length |
87712 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
131 |
%GC |
38.81 |
Number of singletons |
3 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009219499.1 | NC_029023_p56 | hypothetical protein | phrog_4039 | unknown function | unknown function | -1 | 34906 | 35328 |
| YP_009219514.1 | NC_029023_p71 | hypothetical protein | phrog_4116 | unknown function | unknown function | 1 | 43043 | 43402 |
| YP_009219472.1 | NC_029023_p29 | hypothetical protein | phrog_4425 | unknown function | unknown function | -1 | 16895 | 17161 |
| YP_009219557.1 | NC_029023_p114 | hypothetical protein | phrog_3995 | tail protein | tail | 1 | 78359 | 78991 |
| YP_009219523.1 | NC_029023_p80 | hypothetical protein | phrog_4141 | unknown function | unknown function | -1 | 49881 | 50183 |
| YP_009219547.1 | NC_029023_p104 | hypothetical protein | phrog_4397 | unknown function | unknown function | -1 | 69190 | 69390 |
| YP_009219503.1 | NC_029023_p60 | hypothetical protein | phrog_4230 | unknown function | unknown function | 1 | 39149 | 39367 |
| YP_009219506.1 | NC_029023_p63 | hypothetical protein | phrog_2381 | unknown function | unknown function | 1 | 39800 | 39955 |
| YP_009219458.1 | NC_029023_p15 | hypothetical protein | phrog_4453 | unknown function | unknown function | -1 | 6175 | 6501 |
| YP_009219479.1 | NC_029023_p36 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 20613 | 21077 |
| YP_009219545.1 | NC_029023_p102 | hypothetical protein | phrog_113 | portal protein | head and packaging | -1 | 66084 | 67550 |
| YP_009219559.1 | NC_029023_p116 | hypothetical protein | phrog_4266 | unknown function | unknown function | 1 | 79506 | 79904 |
| YP_009219546.1 | NC_029023_p103 | hypothetical protein | phrog_979 | terminase large subunit | head and packaging | -1 | 67567 | 69168 |
| YP_009219502.1 | NC_029023_p59 | DNA polymerase | phrog_6375 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 38533 | 39087 |
| YP_009219449.1 | NC_029023_p6 | hypothetical protein | phrog_4375 | unknown function | unknown function | -1 | 2135 | 2467 |
| YP_009219444.1 | NC_029023_p1 | hypothetical protein | phrog_4640 | unknown function | unknown function | -1 | 28 | 261 |
| YP_009219470.1 | NC_029023_p27 | hypothetical protein | phrog_3500 | unknown function | unknown function | -1 | 15987 | 16520 |
| YP_009219574.1 | NC_029023_p131 | hypothetical protein | phrog_4318 | unknown function | unknown function | -1 | 87310 | 87651 |
| YP_009219484.1 | NC_029023_p41 | hypothetical protein | phrog_2652 | unknown function | unknown function | -1 | 23949 | 24206 |
| YP_009219564.1 | NC_029023_p121 | hypothetical protein | phrog_5380 | unknown function | unknown function | 1 | 81579 | 82124 |
| YP_009219448.1 | NC_029023_p5 | hypothetical protein | phrog_3436 | unknown function | unknown function | -1 | 1775 | 2047 |
| YP_009219538.1 | NC_029023_p95 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | -1 | 61413 | 61895 |
| YP_009219490.1 | NC_029023_p47 | hypothetical protein | phrog_447 | NAD synthetase | other | -1 | 28178 | 28675 |
| YP_009219515.1 | NC_029023_p72 | hypothetical protein | phrog_4422 | unknown function | unknown function | 1 | 43416 | 43931 |
| YP_009219536.1 | NC_029023_p93 | hypothetical protein | phrog_4082 | unknown function | unknown function | -1 | 60441 | 61040 |
| YP_009219493.1 | NC_029023_p50 | hypothetical protein | phrog_4424 | unknown function | unknown function | -1 | 30698 | 30847 |
| YP_009219526.1 | NC_029023_p83 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | -1 | 52512 | 52931 |
| YP_009219554.1 | NC_029023_p111 | hypothetical protein | phrog_8138 | unknown function | unknown function | 1 | 76983 | 77144 |
| YP_009219486.1 | NC_029023_p43 | hypothetical protein | phrog_3358 | unknown function | unknown function | -1 | 26543 | 26782 |
| YP_009219520.1 | NC_029023_p77 | hypothetical protein | phrog_402 | unknown function | unknown function | -1 | 46040 | 46237 |
| YP_009219556.1 | NC_029023_p113 | hypothetical protein | phrog_4463 | unknown function | unknown function | 1 | 77991 | 78362 |
| YP_009219517.1 | NC_029023_p74 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | 1 | 44189 | 44734 |
| YP_009219453.1 | NC_029023_p10 | hypothetical protein | phrog_4495 | unknown function | unknown function | -1 | 3805 | 4185 |
| YP_009219529.1 | NC_029023_p86 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | -1 | 54531 | 54872 |
| YP_009219456.1 | NC_029023_p13 | hypothetical protein | phrog_2210 | unknown function | unknown function | -1 | 5774 | 5974 |
| YP_009219451.1 | NC_029023_p8 | hypothetical protein | phrog_4190 | unknown function | unknown function | -1 | 2850 | 3362 |
| YP_009219488.1 | NC_029023_p45 | hypothetical protein | phrog_2144 | MazG-like pyrophosphatase | other | -1 | 27178 | 27933 |
| YP_009219475.1 | NC_029023_p32 | hypothetical protein | phrog_4382 | unknown function | unknown function | -1 | 17936 | 18331 |
| YP_009219450.1 | NC_029023_p7 | hypothetical protein | phrog_4401 | unknown function | unknown function | -1 | 2461 | 2757 |
| YP_009219563.1 | NC_029023_p120 | hypothetical protein | phrog_4109 | unknown function | unknown function | 1 | 80925 | 81506 |
| YP_009219478.1 | NC_029023_p35 | oxygen sensitive ribonucleoside-triphosphate reductase | phrog_4218 | anaerobic ribonucleoside reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 19503 | 20369 |
| YP_009219537.1 | NC_029023_p94 | hypothetical protein | phrog_2874 | unknown function | unknown function | -1 | 61015 | 61416 |
| YP_009219543.1 | NC_029023_p100 | hypothetical protein | phrog_240 | head protein | head and packaging | -1 | 65252 | 65584 |
| YP_009219485.1 | NC_029023_p42 | ribonucleoside triphosphate reductase alpha chain | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 24262 | 26496 |
| YP_009219482.1 | NC_029023_p39 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 22637 | 22879 |
| YP_009219459.1 | NC_029023_p16 | hypothetical protein | phrog_4391 | unknown function | unknown function | -1 | 6504 | 6773 |
| YP_009219527.1 | NC_029023_p84 | hypothetical protein | phrog_11 | baseplate spike | tail | -1 | 52931 | 53554 |
| YP_009219561.1 | NC_029023_p118 | hypothetical protein | phrog_4385 | unknown function | unknown function | 1 | 80295 | 80588 |
| YP_009219489.1 | NC_029023_p46 | hypothetical protein | phrog_4442 | unknown function | unknown function | -1 | 27926 | 28156 |
| YP_009219551.1 | NC_029023_p108 | hypothetical protein | singleton | unknown function | unknown function | 1 | 74495 | 74620 |
| YP_009219494.1 | NC_029023_p51 | hypothetical protein | phrog_4982 | unknown function | unknown function | -1 | 30844 | 31125 |
| YP_009219558.1 | NC_029023_p115 | hypothetical protein | phrog_7 | endolysin | lysis | 1 | 78991 | 79455 |
| YP_009219518.1 | NC_029023_p75 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 44736 | 45635 |
| YP_009219507.1 | NC_029023_p64 | hypothetical protein | phrog_902 | unknown function | unknown function | 1 | 39969 | 40205 |
| YP_009219463.1 | NC_029023_p20 | hypothetical protein | phrog_600 | unknown function | unknown function | -1 | 8482 | 9030 |
| YP_009219492.1 | NC_029023_p49 | hypothetical protein | phrog_3877 | unknown function | unknown function | -1 | 29768 | 30625 |
| YP_009219505.1 | NC_029023_p62 | hypothetical protein | phrog_4230 | unknown function | unknown function | 1 | 39570 | 39782 |
| YP_009219509.1 | NC_029023_p66 | hypothetical protein | phrog_25478 | unknown function | unknown function | 1 | 40419 | 40586 |
| YP_009219480.1 | NC_029023_p37 | ribonucleotide reductase of class III (anaerobic) large subunit | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | -1 | 21190 | 22389 |
| YP_009219560.1 | NC_029023_p117 | hypothetical protein | phrog_4348 | unknown function | unknown function | 1 | 79897 | 80295 |
| YP_009219501.1 | NC_029023_p58 | hypothetical protein | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 37837 | 38319 |
| YP_009219500.1 | NC_029023_p57 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 35586 | 37769 |
| YP_009219464.1 | NC_029023_p21 | rIIB protein | phrog_609 | RIIB lysis inhibitor | lysis | -1 | 9131 | 10240 |
| YP_009219568.1 | NC_029023_p125 | hypothetical protein | phrog_4713 | unknown function | unknown function | 1 | 83194 | 83658 |
| YP_009219570.1 | NC_029023_p127 | hypothetical protein | singleton | unknown function | unknown function | 1 | 84850 | 84984 |
| YP_009219504.1 | NC_029023_p61 | hypothetical protein | phrog_5180 | unknown function | unknown function | 1 | 39364 | 39573 |
| YP_009219550.1 | NC_029023_p107 | hypothetical protein | singleton | unknown function | unknown function | 1 | 71694 | 71813 |
| YP_009219530.1 | NC_029023_p87 | hypothetical protein | phrog_3721 | unknown function | unknown function | -1 | 54872 | 55669 |
| YP_009219497.1 | NC_029023_p54 | deoxynucleotide monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 33287 | 34045 |
| YP_009219542.1 | NC_029023_p99 | head maturation protease | phrog_53 | head maturation protease | head and packaging | -1 | 63894 | 65240 |
| YP_009219474.1 | NC_029023_p31 | anaerobic NTP reductase small subunit | phrog_626 | anaerobic ribonucleotide reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 17415 | 17900 |
| YP_009219524.1 | NC_029023_p81 | hypothetical protein | phrog_4017 | baseplate protein | tail | -1 | 50183 | 51040 |
| YP_009219447.1 | NC_029023_p4 | hypothetical protein | phrog_4327 | unknown function | unknown function | -1 | 1285 | 1689 |
| YP_009219522.1 | NC_029023_p79 | tail fiber protein | phrog_2097 | tail fiber protein | tail | -1 | 48709 | 49878 |
| YP_009219519.1 | NC_029023_p76 | hypothetical protein | phrog_4038 | unknown function | unknown function | -1 | 45672 | 46043 |
| YP_009219461.1 | NC_029023_p18 | hypothetical protein | phrog_2267 | unknown function | unknown function | -1 | 7333 | 7797 |
| YP_009219491.1 | NC_029023_p48 | exodeoxyribonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 28665 | 29705 |
| YP_009219549.1 | NC_029023_p106 | hypothetical protein | phrog_2143 | unknown function | unknown function | -1 | 70973 | 71530 |
| YP_009219483.1 | NC_029023_p40 | ribonucleoside diphosphate reductase beta chain | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 22879 | 23952 |
| YP_009219571.1 | NC_029023_p128 | hypothetical protein | phrog_4559 | unknown function | unknown function | -1 | 85916 | 86164 |
| YP_009219471.1 | NC_029023_p28 | hypothetical protein | phrog_4462 | unknown function | unknown function | -1 | 16572 | 16892 |
| YP_009219569.1 | NC_029023_p126 | hypothetical protein | phrog_4330 | unknown function | unknown function | 1 | 83672 | 84220 |
| YP_009219532.1 | NC_029023_p89 | hypothetical protein | phrog_4963 | tail assembly chaperone | tail | -1 | 57912 | 58151 |
| YP_009219512.1 | NC_029023_p69 | hypothetical protein | phrog_4473 | unknown function | unknown function | 1 | 42537 | 42749 |
| YP_009219496.1 | NC_029023_p53 | hypothetical protein | phrog_4469 | unknown function | unknown function | -1 | 33078 | 33272 |
| YP_009219535.1 | NC_029023_p92 | structural protein | phrog_205 | tail sheath | tail | -1 | 59088 | 60440 |
| YP_009219452.1 | NC_029023_p9 | hypothetical protein | phrog_5089 | unknown function | unknown function | -1 | 3458 | 3715 |
| YP_009219572.1 | NC_029023_p129 | hypothetical protein | phrog_7022 | unknown function | unknown function | -1 | 86230 | 86493 |
| YP_009219511.1 | NC_029023_p68 | hypothetical protein | phrog_4332 | unknown function | unknown function | 1 | 42152 | 42535 |
| YP_009219521.1 | NC_029023_p78 | tail fiber protein | phrog_4277 | tail fiber protein | tail | -1 | 46317 | 48662 |
| YP_009219513.1 | NC_029023_p70 | transcriptional regulator | phrog_1373 | transcriptional regulator | transcription regulation | 1 | 42742 | 43041 |
| YP_009219467.1 | NC_029023_p24 | hypothetical protein | phrog_4262 | unknown function | unknown function | -1 | 12873 | 13208 |
| YP_009219495.1 | NC_029023_p52 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 31100 | 33085 |
| YP_009219466.1 | NC_029023_p23 | membrane protein | phrog_3931 | unknown function | unknown function | -1 | 12715 | 12891 |
| YP_009219481.1 | NC_029023_p38 | hypothetical protein | phrog_4532 | unknown function | unknown function | -1 | 22438 | 22644 |
| YP_009219539.1 | NC_029023_p96 | hypothetical protein | phrog_1732 | unknown function | unknown function | -1 | 61895 | 62344 |
| YP_009219510.1 | NC_029023_p67 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 40736 | 41875 |
| YP_009219567.1 | NC_029023_p124 | hypothetical protein | phrog_4457 | unknown function | unknown function | 1 | 82916 | 83140 |
| YP_009219534.1 | NC_029023_p91 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | -1 | 58626 | 59072 |
| YP_009219516.1 | NC_029023_p73 | hypothetical protein | phrog_2993 | unknown function | unknown function | 1 | 43932 | 44192 |
| YP_009219477.1 | NC_029023_p34 | hypothetical protein | phrog_655 | homing endonuclease | DNA, RNA and nucleotide metabolism | -1 | 18929 | 19495 |
| YP_009219455.1 | NC_029023_p12 | hypothetical protein | phrog_335 | phosphatase | other | -1 | 4988 | 5773 |
| YP_009219540.1 | NC_029023_p97 | major capsid protein | phrog_29 | major head protein | head and packaging | -1 | 62365 | 63471 |
| YP_009219446.1 | NC_029023_p3 | hypothetical protein | phrog_3623 | unknown function | unknown function | -1 | 981 | 1184 |
| YP_009219552.1 | NC_029023_p109 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | -1 | 74865 | 76280 |
| YP_009219562.1 | NC_029023_p119 | hypothetical protein | phrog_4040 | unknown function | unknown function | 1 | 80581 | 80925 |
| YP_009219498.1 | NC_029023_p55 | hypothetical protein | phrog_4251 | minor tail protein | tail | -1 | 34092 | 34904 |
| YP_009219528.1 | NC_029023_p85 | hypothetical protein | phrog_196 | baseplate hub | tail | -1 | 53554 | 54531 |
| YP_009219565.1 | NC_029023_p122 | hypothetical protein | phrog_4459 | unknown function | unknown function | 1 | 82121 | 82339 |
| YP_009219541.1 | NC_029023_p98 | hypothetical protein | phrog_4146 | tail protease | other | -1 | 63505 | 63882 |
| YP_009219544.1 | NC_029023_p101 | hypothetical protein | phrog_3977 | unknown function | unknown function | -1 | 65584 | 66084 |
| YP_009219508.1 | NC_029023_p65 | hypothetical protein | phrog_4427 | unknown function | unknown function | 1 | 40216 | 40422 |
| YP_009219476.1 | NC_029023_p33 | hypothetical protein | phrog_8826 | unknown function | unknown function | -1 | 18531 | 18866 |
| YP_009219462.1 | NC_029023_p19 | hypothetical protein | phrog_3970 | polynucleotide kinase | other | -1 | 7809 | 8504 |
| YP_009219469.1 | NC_029023_p26 | ribose-phosphate pyrophosphokinase | phrog_619 | ribose-phosphate pyrophosphokinase | other | -1 | 15090 | 15971 |
| YP_009219533.1 | NC_029023_p90 | hypothetical protein | phrog_1613 | tail assembly chaperone | tail | -1 | 58154 | 58552 |
| YP_009219555.1 | NC_029023_p112 | hypothetical protein | phrog_4034 | unknown function | unknown function | 1 | 77353 | 77943 |
| YP_009219457.1 | NC_029023_p14 | hypothetical protein | phrog_6082 | unknown function | unknown function | -1 | 5967 | 6200 |
| YP_009219468.1 | NC_029023_p25 | nictotinate phosphoribosyltransferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | -1 | 13262 | 15043 |
| YP_009219473.1 | NC_029023_p30 | hypothetical protein | phrog_5082 | unknown function | unknown function | -1 | 17177 | 17452 |
| YP_009219573.1 | NC_029023_p130 | hypothetical protein | phrog_4725 | unknown function | unknown function | -1 | 86559 | 87089 |
| YP_009219460.1 | NC_029023_p17 | hypothetical protein | phrog_1152 | Rz-like spanin | lysis | -1 | 6933 | 7280 |
| YP_009219487.1 | NC_029023_p44 | hypothetical protein | phrog_4007 | unknown function | unknown function | -1 | 26874 | 27197 |
| YP_009219548.1 | NC_029023_p105 | hypothetical protein | phrog_2114 | unknown function | unknown function | -1 | 69787 | 70521 |
| YP_009219445.1 | NC_029023_p2 | hypothetical protein | phrog_3303 | unknown function | unknown function | -1 | 325 | 888 |
| YP_009219566.1 | NC_029023_p123 | hypothetical protein | phrog_4343 | unknown function | unknown function | 1 | 82336 | 82839 |
| YP_009219553.1 | NC_029023_p110 | hypothetical protein | phrog_4114 | unknown function | unknown function | -1 | 76362 | 76733 |
| YP_009219531.1 | NC_029023_p88 | tail length tape-measure protein | phrog_4036 | tail length tape measure protein | tail | -1 | 55669 | 57912 |
| YP_009219525.1 | NC_029023_p82 | hypothetical protein | phrog_6 | baseplate wedge subunit | tail | -1 | 51043 | 52512 |
| YP_009219454.1 | NC_029023_p11 | hypothetical protein | phrog_5293 | unknown function | unknown function | -1 | 4274 | 4480 |
| YP_009219465.1 | NC_029023_p22 | rIIA protein | phrog_612 | RIIA lysis inhibitor | lysis | -1 | 10320 | 12686 |