Genomic map of Escherichia phage JH2 (NC_029023)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029023
Definition
Escherichia phage JH2, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Felixounavirus.
DB of origin
REFSEQ
Length
87712
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
131
%GC
38.81
Number of singletons
3
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009219499.1 NC_029023_p56 hypothetical protein phrog_4039 unknown function unknown function -1 34906 35328
YP_009219514.1 NC_029023_p71 hypothetical protein phrog_4116 unknown function unknown function 1 43043 43402
YP_009219472.1 NC_029023_p29 hypothetical protein phrog_4425 unknown function unknown function -1 16895 17161
YP_009219557.1 NC_029023_p114 hypothetical protein phrog_3995 tail protein tail 1 78359 78991
YP_009219523.1 NC_029023_p80 hypothetical protein phrog_4141 unknown function unknown function -1 49881 50183
YP_009219547.1 NC_029023_p104 hypothetical protein phrog_4397 unknown function unknown function -1 69190 69390
YP_009219503.1 NC_029023_p60 hypothetical protein phrog_4230 unknown function unknown function 1 39149 39367
YP_009219506.1 NC_029023_p63 hypothetical protein phrog_2381 unknown function unknown function 1 39800 39955
YP_009219458.1 NC_029023_p15 hypothetical protein phrog_4453 unknown function unknown function -1 6175 6501
YP_009219479.1 NC_029023_p36 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 20613 21077
YP_009219545.1 NC_029023_p102 hypothetical protein phrog_113 portal protein head and packaging -1 66084 67550
YP_009219559.1 NC_029023_p116 hypothetical protein phrog_4266 unknown function unknown function 1 79506 79904
YP_009219546.1 NC_029023_p103 hypothetical protein phrog_979 terminase large subunit head and packaging -1 67567 69168
YP_009219502.1 NC_029023_p59 DNA polymerase phrog_6375 DNA polymerase DNA, RNA and nucleotide metabolism 1 38533 39087
YP_009219449.1 NC_029023_p6 hypothetical protein phrog_4375 unknown function unknown function -1 2135 2467
YP_009219444.1 NC_029023_p1 hypothetical protein phrog_4640 unknown function unknown function -1 28 261
YP_009219470.1 NC_029023_p27 hypothetical protein phrog_3500 unknown function unknown function -1 15987 16520
YP_009219574.1 NC_029023_p131 hypothetical protein phrog_4318 unknown function unknown function -1 87310 87651
YP_009219484.1 NC_029023_p41 hypothetical protein phrog_2652 unknown function unknown function -1 23949 24206
YP_009219564.1 NC_029023_p121 hypothetical protein phrog_5380 unknown function unknown function 1 81579 82124
YP_009219448.1 NC_029023_p5 hypothetical protein phrog_3436 unknown function unknown function -1 1775 2047
YP_009219538.1 NC_029023_p95 hypothetical protein phrog_222 tail completion or Neck1 protein connector -1 61413 61895
YP_009219490.1 NC_029023_p47 hypothetical protein phrog_447 NAD synthetase other -1 28178 28675
YP_009219515.1 NC_029023_p72 hypothetical protein phrog_4422 unknown function unknown function 1 43416 43931
YP_009219536.1 NC_029023_p93 hypothetical protein phrog_4082 unknown function unknown function -1 60441 61040
YP_009219493.1 NC_029023_p50 hypothetical protein phrog_4424 unknown function unknown function -1 30698 30847
YP_009219526.1 NC_029023_p83 hypothetical protein phrog_120 baseplate wedge subunit tail -1 52512 52931
YP_009219554.1 NC_029023_p111 hypothetical protein phrog_8138 unknown function unknown function 1 76983 77144
YP_009219486.1 NC_029023_p43 hypothetical protein phrog_3358 unknown function unknown function -1 26543 26782
YP_009219520.1 NC_029023_p77 hypothetical protein phrog_402 unknown function unknown function -1 46040 46237
YP_009219556.1 NC_029023_p113 hypothetical protein phrog_4463 unknown function unknown function 1 77991 78362
YP_009219517.1 NC_029023_p74 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism 1 44189 44734
YP_009219453.1 NC_029023_p10 hypothetical protein phrog_4495 unknown function unknown function -1 3805 4185
YP_009219529.1 NC_029023_p86 hypothetical protein phrog_349 virion structural protein head and packaging -1 54531 54872
YP_009219456.1 NC_029023_p13 hypothetical protein phrog_2210 unknown function unknown function -1 5774 5974
YP_009219451.1 NC_029023_p8 hypothetical protein phrog_4190 unknown function unknown function -1 2850 3362
YP_009219488.1 NC_029023_p45 hypothetical protein phrog_2144 MazG-like pyrophosphatase other -1 27178 27933
YP_009219475.1 NC_029023_p32 hypothetical protein phrog_4382 unknown function unknown function -1 17936 18331
YP_009219450.1 NC_029023_p7 hypothetical protein phrog_4401 unknown function unknown function -1 2461 2757
YP_009219563.1 NC_029023_p120 hypothetical protein phrog_4109 unknown function unknown function 1 80925 81506
YP_009219478.1 NC_029023_p35 oxygen sensitive ribonucleoside-triphosphate reductase phrog_4218 anaerobic ribonucleoside reductase large subunit DNA, RNA and nucleotide metabolism -1 19503 20369
YP_009219537.1 NC_029023_p94 hypothetical protein phrog_2874 unknown function unknown function -1 61015 61416
YP_009219543.1 NC_029023_p100 hypothetical protein phrog_240 head protein head and packaging -1 65252 65584
YP_009219485.1 NC_029023_p42 ribonucleoside triphosphate reductase alpha chain phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 24262 26496
YP_009219482.1 NC_029023_p39 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 22637 22879
YP_009219459.1 NC_029023_p16 hypothetical protein phrog_4391 unknown function unknown function -1 6504 6773
YP_009219527.1 NC_029023_p84 hypothetical protein phrog_11 baseplate spike tail -1 52931 53554
YP_009219561.1 NC_029023_p118 hypothetical protein phrog_4385 unknown function unknown function 1 80295 80588
YP_009219489.1 NC_029023_p46 hypothetical protein phrog_4442 unknown function unknown function -1 27926 28156
YP_009219551.1 NC_029023_p108 hypothetical protein singleton unknown function unknown function 1 74495 74620
YP_009219494.1 NC_029023_p51 hypothetical protein phrog_4982 unknown function unknown function -1 30844 31125
YP_009219558.1 NC_029023_p115 hypothetical protein phrog_7 endolysin lysis 1 78991 79455
YP_009219518.1 NC_029023_p75 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 44736 45635
YP_009219507.1 NC_029023_p64 hypothetical protein phrog_902 unknown function unknown function 1 39969 40205
YP_009219463.1 NC_029023_p20 hypothetical protein phrog_600 unknown function unknown function -1 8482 9030
YP_009219492.1 NC_029023_p49 hypothetical protein phrog_3877 unknown function unknown function -1 29768 30625
YP_009219505.1 NC_029023_p62 hypothetical protein phrog_4230 unknown function unknown function 1 39570 39782
YP_009219509.1 NC_029023_p66 hypothetical protein phrog_25478 unknown function unknown function 1 40419 40586
YP_009219480.1 NC_029023_p37 ribonucleotide reductase of class III (anaerobic) large subunit phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover -1 21190 22389
YP_009219560.1 NC_029023_p117 hypothetical protein phrog_4348 unknown function unknown function 1 79897 80295
YP_009219501.1 NC_029023_p58 hypothetical protein phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism 1 37837 38319
YP_009219500.1 NC_029023_p57 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 35586 37769
YP_009219464.1 NC_029023_p21 rIIB protein phrog_609 RIIB lysis inhibitor lysis -1 9131 10240
YP_009219568.1 NC_029023_p125 hypothetical protein phrog_4713 unknown function unknown function 1 83194 83658
YP_009219570.1 NC_029023_p127 hypothetical protein singleton unknown function unknown function 1 84850 84984
YP_009219504.1 NC_029023_p61 hypothetical protein phrog_5180 unknown function unknown function 1 39364 39573
YP_009219550.1 NC_029023_p107 hypothetical protein singleton unknown function unknown function 1 71694 71813
YP_009219530.1 NC_029023_p87 hypothetical protein phrog_3721 unknown function unknown function -1 54872 55669
YP_009219497.1 NC_029023_p54 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other -1 33287 34045
YP_009219542.1 NC_029023_p99 head maturation protease phrog_53 head maturation protease head and packaging -1 63894 65240
YP_009219474.1 NC_029023_p31 anaerobic NTP reductase small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism -1 17415 17900
YP_009219524.1 NC_029023_p81 hypothetical protein phrog_4017 baseplate protein tail -1 50183 51040
YP_009219447.1 NC_029023_p4 hypothetical protein phrog_4327 unknown function unknown function -1 1285 1689
YP_009219522.1 NC_029023_p79 tail fiber protein phrog_2097 tail fiber protein tail -1 48709 49878
YP_009219519.1 NC_029023_p76 hypothetical protein phrog_4038 unknown function unknown function -1 45672 46043
YP_009219461.1 NC_029023_p18 hypothetical protein phrog_2267 unknown function unknown function -1 7333 7797
YP_009219491.1 NC_029023_p48 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 28665 29705
YP_009219549.1 NC_029023_p106 hypothetical protein phrog_2143 unknown function unknown function -1 70973 71530
YP_009219483.1 NC_029023_p40 ribonucleoside diphosphate reductase beta chain phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 22879 23952
YP_009219571.1 NC_029023_p128 hypothetical protein phrog_4559 unknown function unknown function -1 85916 86164
YP_009219471.1 NC_029023_p28 hypothetical protein phrog_4462 unknown function unknown function -1 16572 16892
YP_009219569.1 NC_029023_p126 hypothetical protein phrog_4330 unknown function unknown function 1 83672 84220
YP_009219532.1 NC_029023_p89 hypothetical protein phrog_4963 tail assembly chaperone tail -1 57912 58151
YP_009219512.1 NC_029023_p69 hypothetical protein phrog_4473 unknown function unknown function 1 42537 42749
YP_009219496.1 NC_029023_p53 hypothetical protein phrog_4469 unknown function unknown function -1 33078 33272
YP_009219535.1 NC_029023_p92 structural protein phrog_205 tail sheath tail -1 59088 60440
YP_009219452.1 NC_029023_p9 hypothetical protein phrog_5089 unknown function unknown function -1 3458 3715
YP_009219572.1 NC_029023_p129 hypothetical protein phrog_7022 unknown function unknown function -1 86230 86493
YP_009219511.1 NC_029023_p68 hypothetical protein phrog_4332 unknown function unknown function 1 42152 42535
YP_009219521.1 NC_029023_p78 tail fiber protein phrog_4277 tail fiber protein tail -1 46317 48662
YP_009219513.1 NC_029023_p70 transcriptional regulator phrog_1373 transcriptional regulator transcription regulation 1 42742 43041
YP_009219467.1 NC_029023_p24 hypothetical protein phrog_4262 unknown function unknown function -1 12873 13208
YP_009219495.1 NC_029023_p52 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 31100 33085
YP_009219466.1 NC_029023_p23 membrane protein phrog_3931 unknown function unknown function -1 12715 12891
YP_009219481.1 NC_029023_p38 hypothetical protein phrog_4532 unknown function unknown function -1 22438 22644
YP_009219539.1 NC_029023_p96 hypothetical protein phrog_1732 unknown function unknown function -1 61895 62344
YP_009219510.1 NC_029023_p67 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 40736 41875
YP_009219567.1 NC_029023_p124 hypothetical protein phrog_4457 unknown function unknown function 1 82916 83140
YP_009219534.1 NC_029023_p91 hypothetical protein phrog_280 virion structural protein head and packaging -1 58626 59072
YP_009219516.1 NC_029023_p73 hypothetical protein phrog_2993 unknown function unknown function 1 43932 44192
YP_009219477.1 NC_029023_p34 hypothetical protein phrog_655 homing endonuclease DNA, RNA and nucleotide metabolism -1 18929 19495
YP_009219455.1 NC_029023_p12 hypothetical protein phrog_335 phosphatase other -1 4988 5773
YP_009219540.1 NC_029023_p97 major capsid protein phrog_29 major head protein head and packaging -1 62365 63471
YP_009219446.1 NC_029023_p3 hypothetical protein phrog_3623 unknown function unknown function -1 981 1184
YP_009219552.1 NC_029023_p109 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism -1 74865 76280
YP_009219562.1 NC_029023_p119 hypothetical protein phrog_4040 unknown function unknown function 1 80581 80925
YP_009219498.1 NC_029023_p55 hypothetical protein phrog_4251 minor tail protein tail -1 34092 34904
YP_009219528.1 NC_029023_p85 hypothetical protein phrog_196 baseplate hub tail -1 53554 54531
YP_009219565.1 NC_029023_p122 hypothetical protein phrog_4459 unknown function unknown function 1 82121 82339
YP_009219541.1 NC_029023_p98 hypothetical protein phrog_4146 tail protease other -1 63505 63882
YP_009219544.1 NC_029023_p101 hypothetical protein phrog_3977 unknown function unknown function -1 65584 66084
YP_009219508.1 NC_029023_p65 hypothetical protein phrog_4427 unknown function unknown function 1 40216 40422
YP_009219476.1 NC_029023_p33 hypothetical protein phrog_8826 unknown function unknown function -1 18531 18866
YP_009219462.1 NC_029023_p19 hypothetical protein phrog_3970 polynucleotide kinase other -1 7809 8504
YP_009219469.1 NC_029023_p26 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other -1 15090 15971
YP_009219533.1 NC_029023_p90 hypothetical protein phrog_1613 tail assembly chaperone tail -1 58154 58552
YP_009219555.1 NC_029023_p112 hypothetical protein phrog_4034 unknown function unknown function 1 77353 77943
YP_009219457.1 NC_029023_p14 hypothetical protein phrog_6082 unknown function unknown function -1 5967 6200
YP_009219468.1 NC_029023_p25 nictotinate phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other -1 13262 15043
YP_009219473.1 NC_029023_p30 hypothetical protein phrog_5082 unknown function unknown function -1 17177 17452
YP_009219573.1 NC_029023_p130 hypothetical protein phrog_4725 unknown function unknown function -1 86559 87089
YP_009219460.1 NC_029023_p17 hypothetical protein phrog_1152 Rz-like spanin lysis -1 6933 7280
YP_009219487.1 NC_029023_p44 hypothetical protein phrog_4007 unknown function unknown function -1 26874 27197
YP_009219548.1 NC_029023_p105 hypothetical protein phrog_2114 unknown function unknown function -1 69787 70521
YP_009219445.1 NC_029023_p2 hypothetical protein phrog_3303 unknown function unknown function -1 325 888
YP_009219566.1 NC_029023_p123 hypothetical protein phrog_4343 unknown function unknown function 1 82336 82839
YP_009219553.1 NC_029023_p110 hypothetical protein phrog_4114 unknown function unknown function -1 76362 76733
YP_009219531.1 NC_029023_p88 tail length tape-measure protein phrog_4036 tail length tape measure protein tail -1 55669 57912
YP_009219525.1 NC_029023_p82 hypothetical protein phrog_6 baseplate wedge subunit tail -1 51043 52512
YP_009219454.1 NC_029023_p11 hypothetical protein phrog_5293 unknown function unknown function -1 4274 4480
YP_009219465.1 NC_029023_p22 rIIA protein phrog_612 RIIA lysis inhibitor lysis -1 10320 12686