Genomic map of Enterobacteria phage JenP1 (NC_029028)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029028
Definition
Enterobacteria phage JenP1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nonagvirus.
DB of origin
REFSEQ
Length
60754
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
87
%GC
43.23
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009220029.1 NC_029028_p59 hypothetical protein phrog_17131 unknown function unknown function 1 46087 46317
YP_009219988.1 NC_029028_p18 hypothetical protein phrog_2048 tail protein tail 1 15136 15720
YP_009220053.1 NC_029028_p83 hypothetical protein phrog_12090 unknown function unknown function 1 58613 58804
YP_009220004.1 NC_029028_p34 GTP cyclohydrolase I / queuosine biosynthesis protein FolE phrog_2197 GTP cyclohydrolase other -1 29960 30559
YP_009219972.1 NC_029028_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 521 2119
YP_009219993.1 NC_029028_p23 tail fiber protein phrog_1419 tail protein tail 1 19841 21952
YP_009220039.1 NC_029028_p69 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 52740 53213
YP_009219998.1 NC_029028_p28 hypothetical protein phrog_8329 unknown function unknown function 1 24600 25148
YP_009219996.1 NC_029028_p26 hypothetical protein phrog_9288 unknown function unknown function 1 23445 24152
YP_009220045.1 NC_029028_p75 hypothetical protein phrog_13865 unknown function unknown function -1 54777 55082
YP_009219995.1 NC_029028_p25 endosialidase-like protein phrog_4563 tail fiber protein tail 1 22237 23292
YP_009219994.1 NC_029028_p24 hypothetical protein phrog_1361 unknown function unknown function 1 21949 22227
YP_009220019.1 NC_029028_p49 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 42918 43442
YP_009219991.1 NC_029028_p21 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover -1 18790 19404
YP_009220042.1 NC_029028_p72 hypothetical protein phrog_3199 unknown function unknown function -1 53706 53951
YP_009220011.1 NC_029028_p41 hypothetical protein phrog_24889 unknown function unknown function -1 35873 36139
YP_009219973.1 NC_029028_p3 structural protein phrog_145 portal protein head and packaging 1 2132 3658
YP_009219990.1 NC_029028_p20 tail fiber protein phrog_31 central tail fiber J tail 1 16131 18755
YP_009220026.1 NC_029028_p56 hypothetical protein phrog_35106 unknown function unknown function -1 45237 45458
YP_009220025.1 NC_029028_p55 hypothetical protein phrog_18974 unknown function unknown function -1 44995 45219
YP_009220033.1 NC_029028_p63 hypothetical protein phrog_5321 unknown function unknown function -1 49645 49914
YP_009220030.1 NC_029028_p60 DNA primase/helicase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism -1 46348 48897
YP_009220010.1 NC_029028_p40 hypothetical protein phrog_7864 unknown function unknown function -1 35149 35871
YP_009219982.1 NC_029028_p12 hypothetical protein phrog_179 tail terminator connector 1 8779 9246
YP_009220017.1 NC_029028_p47 RNAse H phrog_531 Rnase H DNA, RNA and nucleotide metabolism -1 41826 42416
YP_009220041.1 NC_029028_p71 hypothetical protein phrog_18706 unknown function unknown function -1 53531 53695
YP_009220023.1 NC_029028_p53 hypothetical protein phrog_11457 unknown function unknown function -1 44511 44690
YP_009219999.1 NC_029028_p29 hypothetical protein phrog_7239 unknown function unknown function 1 25145 25414
YP_009219981.1 NC_029028_p11 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 8363 8782
YP_009220018.1 NC_029028_p48 hypothetical protein phrog_2480 unknown function unknown function -1 42417 42842
YP_009220056.1 NC_029028_p86 hypothetical protein phrog_873 endolysin head and packaging 1 59630 60064
YP_009220036.1 NC_029028_p66 hypothetical protein phrog_17615 unknown function unknown function -1 50558 50908
YP_009220021.1 NC_029028_p51 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 43591 44052
YP_009219983.1 NC_029028_p13 phage tail subunit phrog_290 minor tail protein tail 1 9249 10430
YP_009219985.1 NC_029028_p15 hypothetical protein phrog_4966 unknown function unknown function 1 10944 11282
YP_009219971.1 NC_029028_p1 terminase small subunit phrog_5334 terminase small subunit head and packaging 1 1 552
YP_009220028.1 NC_029028_p58 hypothetical protein phrog_17339 protease other -1 45710 45988
YP_009220031.1 NC_029028_p61 hypothetical protein phrog_19703 unknown function unknown function -1 48907 49143
YP_009220022.1 NC_029028_p52 hypothetical protein phrog_20894 unknown function unknown function -1 44239 44514
YP_009219987.1 NC_029028_p17 hypothetical protein phrog_1302 distal tail protein tail 1 14546 15136
YP_009220046.1 NC_029028_p76 hypothetical protein singleton unknown function unknown function -1 55214 55522
YP_009219984.1 NC_029028_p14 hypothetical protein phrog_569 tail length tape measure protein tail 1 10471 10899
YP_009220009.1 NC_029028_p39 hypothetical protein phrog_11298 unknown function unknown function -1 34228 35052
YP_009220032.1 NC_029028_p62 hypothetical protein phrog_17122 unknown function unknown function -1 49217 49630
YP_009220034.1 NC_029028_p64 hypothetical protein phrog_18528 unknown function unknown function -1 49917 50132
YP_009220050.1 NC_029028_p80 hypothetical protein phrog_17085 unknown function unknown function 1 57498 57860
YP_009220020.1 NC_029028_p50 hypothetical protein phrog_1312 unknown function unknown function -1 43435 43578
YP_009220012.1 NC_029028_p42 type I restriction-modification system, restriction subunit R phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 36120 38123
YP_009220047.1 NC_029028_p77 hypothetical protein phrog_17838 unknown function unknown function 1 56351 56713
YP_009220013.1 NC_029028_p43 hypothetical protein phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 38124 39074
YP_009220027.1 NC_029028_p57 hypothetical protein phrog_9346 unknown function unknown function -1 45495 45692
YP_009220057.1 NC_029028_p87 hypothetical protein phrog_16688 unknown function unknown function 1 60389 60625
YP_009220001.1 NC_029028_p31 hypothetical protein phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 27455 28447
YP_009219986.1 NC_029028_p16 tail length tape-measure protein 1 phrog_339 tail length tape measure protein tail 1 11282 14542
YP_009220000.1 NC_029028_p30 DNA polymerase B region phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 25485 27458
YP_009220051.1 NC_029028_p81 hypothetical protein singleton unknown function unknown function 1 57829 58122
YP_009220008.1 NC_029028_p38 queuosine Biosynthesis QueE Radical SAM phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover -1 33395 34159
YP_009220002.1 NC_029028_p32 hypothetical protein phrog_887 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover -1 28456 29409
YP_009219976.1 NC_029028_p6 hypothetical protein phrog_18016 unknown function unknown function 1 5968 6402
YP_009220014.1 NC_029028_p44 hypothetical protein phrog_6015 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 39137 40084
YP_009219979.1 NC_029028_p9 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 7489 7992
YP_009220037.1 NC_029028_p67 hypothetical protein phrog_16944 unknown function unknown function -1 50908 51177
YP_009220007.1 NC_029028_p37 hypothetical protein phrog_18443 unknown function unknown function -1 32521 33282
YP_009220024.1 NC_029028_p54 hypothetical protein phrog_2993 unknown function unknown function -1 44687 44995
YP_009220006.1 NC_029028_p36 glutamine amidotransferases class-II (GATase) / queuosine biosynthesis QueC ATPase phrog_10428 L-glutamine-D-fructose-6-phosphate aminotransferase other -1 31104 32519
YP_009220048.1 NC_029028_p78 hypothetical protein phrog_21152 unknown function unknown function 1 56716 57054
YP_009220016.1 NC_029028_p46 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 40895 41839
YP_009220040.1 NC_029028_p70 hypothetical protein phrog_3199 unknown function unknown function -1 53214 53462
YP_009220003.1 NC_029028_p33 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism -1 29402 29890
YP_009219974.1 NC_029028_p4 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 3778 4668
YP_009220015.1 NC_029028_p45 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 40084 40830
YP_009220049.1 NC_029028_p79 hypothetical protein phrog_4049 unknown function unknown function 1 57054 57494
YP_009219980.1 NC_029028_p10 hypothetical protein phrog_161 head closure Hc1 connector 1 7989 8363
YP_009219989.1 NC_029028_p19 hypothetical protein phrog_2134 unknown function unknown function 1 15713 16129
YP_009220054.1 NC_029028_p84 hypothetical protein phrog_19774 unknown function unknown function 1 58801 59025
YP_009220038.1 NC_029028_p68 hypothetical protein phrog_18014 unknown function unknown function -1 51179 51799
YP_009219975.1 NC_029028_p5 capsid protein phrog_247 major head protein head and packaging 1 4807 5910
YP_009219978.1 NC_029028_p8 hypothetical protein phrog_17875 unknown function unknown function 1 7152 7481
YP_009220035.1 NC_029028_p65 hypothetical protein phrog_1972 unknown function unknown function -1 50125 50568
YP_009220052.1 NC_029028_p82 hypothetical protein phrog_1040 peptidase HslV family other 1 58122 58616
YP_009220044.1 NC_029028_p74 hypothetical protein phrog_17772 unknown function unknown function -1 54221 54700
YP_009219997.1 NC_029028_p27 hypothetical protein phrog_9157 unknown function unknown function 1 24218 24583
YP_009219977.1 NC_029028_p7 hypothetical protein phrog_10966 unknown function unknown function 1 6475 7143
YP_009220043.1 NC_029028_p73 hypothetical protein phrog_5461 unknown function unknown function -1 53957 54142
YP_009220005.1 NC_029028_p35 6-carboxytetrahydropterin synthase phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover -1 30586 31101
YP_009219992.1 NC_029028_p22 hypothetical protein phrog_557 outer membrane protein other -1 19407 19688
YP_009220055.1 NC_029028_p85 lysin phrog_312 Rz-like spanin lysis 1 59010 59507