Genomic map of Achromobacter phage phiAxp-1 (NC_029033)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029033
Definition
Achromobacter phage phiAxp-1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
45045
Host Name
Achromobacter xylosoxidans
Host domain
Bacteria
Is prophage?
undef
Number of proteins
64
%GC
56.01
Number of singletons
26
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009220326.1 NC_029033_p25 hypothetical protein singleton unknown function unknown function 1 13042 13254
YP_009220362.1 NC_029033_p61 hypothetical protein singleton unknown function unknown function 1 41325 41516
YP_009220360.1 NC_029033_p59 PF09327 domain protein phrog_31 central tail fiber J tail 1 36933 40928
YP_009220364.1 NC_029033_p63 replicative clamp phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 43680 44720
YP_009220314.1 NC_029033_p13 hypothetical protein singleton unknown function unknown function 1 9304 9453
YP_009220352.1 NC_029033_p51 tail chaperonin phrog_3817 tail chaperonin tail 1 29216 29494
YP_009220328.1 NC_029033_p27 hypothetical protein phrog_54 DksA-like zinc-finger protein other 1 13572 13781
YP_009220354.1 NC_029033_p53 tail tape measure phrog_3336 tail length tape measure protein tail 1 29939 33073
YP_009220334.1 NC_029033_p33 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 15352 15807
YP_009220350.1 NC_029033_p49 major tail tube protein phrog_290 minor tail protein tail 1 27010 28644
YP_009220308.1 NC_029033_p7 hypothetical protein singleton unknown function unknown function 1 4623 4838
YP_009220342.1 NC_029033_p41 portal protein phrog_145 portal protein head and packaging 1 20718 22319
YP_009220311.1 NC_029033_p10 hypothetical protein singleton unknown function unknown function 1 8051 8779
YP_009220319.1 NC_029033_p18 hypothetical protein singleton unknown function unknown function 1 11162 11461
YP_009220347.1 NC_029033_p46 virion protein phrog_477 head-tail adaptor Ad1 connector 1 25623 26144
YP_009220309.1 NC_029033_p8 replicative primase/helicase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism 1 4822 7245
YP_009220305.1 NC_029033_p4 recombinase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 2726 3406
YP_009220330.1 NC_029033_p29 hypothetical protein singleton unknown function unknown function 1 14375 14695
YP_009220316.1 NC_029033_p15 hypothetical protein singleton unknown function unknown function 1 9677 10063
YP_009220365.1 NC_029033_p64 hypothetical protein phrog_11184 unknown function unknown function -1 44704 45045
YP_009220313.1 NC_029033_p12 hypothetical protein singleton unknown function unknown function 1 9050 9307
YP_009220338.1 NC_029033_p37 hypothetical protein phrog_315 endolysin lysis 1 17707 18246
YP_009220358.1 NC_029033_p57 hypothetical protein phrog_396 minor tail protein tail 1 36005 36544
YP_009220344.1 NC_029033_p43 scaffold protein phrog_206 head scaffolding protein head and packaging 1 23373 24101
YP_009220318.1 NC_029033_p17 hypothetical protein singleton unknown function unknown function 1 10471 11160
YP_009220310.1 NC_029033_p9 hypothetical protein singleton unknown function unknown function 1 7593 8054
YP_009220317.1 NC_029033_p16 hypothetical protein singleton unknown function unknown function 1 10160 10390
YP_009220307.1 NC_029033_p6 mazG pyrophosphatase phrog_229 MazG-like pyrophosphatase other -1 3954 4496
YP_009220353.1 NC_029033_p52 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 29491 29934
YP_009220320.1 NC_029033_p19 hypothetical protein singleton unknown function unknown function 1 11461 11901
YP_009220341.1 NC_029033_p40 terminase large subunit phrog_2 terminase large subunit head and packaging 1 19117 20703
YP_009220355.1 NC_029033_p54 hypothetical protein phrog_384 virion structural protein head and packaging 1 33078 34382
YP_009220312.1 NC_029033_p11 hypothetical protein singleton unknown function unknown function 1 8845 9045
YP_009220329.1 NC_029033_p28 endonuclease phrog_824 unknown function unknown function 1 13785 14339
YP_009220349.1 NC_029033_p48 minor tail protein phrog_179 tail terminator connector 1 26547 26999
YP_009220348.1 NC_029033_p47 hypothetical protein phrog_161 head closure Hc1 connector 1 26141 26539
YP_009220302.1 NC_029033_p1 hypothetical protein singleton unknown function unknown function -1 9 266
YP_009220327.1 NC_029033_p26 hypothetical protein phrog_8898 unknown function unknown function 1 13256 13579
YP_009220335.1 NC_029033_p34 hypothetical protein singleton unknown function unknown function 1 15804 16184
YP_009220303.1 NC_029033_p2 DNA/RNA helicase protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 250 1911
YP_009220339.1 NC_029033_p38 hypothetical protein phrog_1026 Rz-like spanin lysis 1 18247 18507
YP_009220351.1 NC_029033_p50 tail chaperonin protein phrog_313 Tail assembly chaperone tail 1 28731 29171
YP_009220340.1 NC_029033_p39 hypothetical protein phrog_5334 terminase small subunit head and packaging 1 18681 19139
YP_009220363.1 NC_029033_p62 DNA polymerase subunit phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 41560 43680
YP_009220356.1 NC_029033_p55 hypothetical protein phrog_5417 unknown function unknown function 1 34387 34839
YP_009220361.1 NC_029033_p60 hypothetical protein singleton unknown function unknown function 1 40925 41347
YP_009220346.1 NC_029033_p45 hypothetical protein phrog_9062 unknown function unknown function 1 25187 25555
YP_009220337.1 NC_029033_p36 hypothetical protein phrog_26164 unknown function unknown function 1 17087 17476
YP_009220357.1 NC_029033_p56 hypothetical protein phrog_863 tail fiber assembly tail 1 34870 35967
YP_009220323.1 NC_029033_p22 hypothetical protein singleton unknown function unknown function 1 12367 12765
YP_009220324.1 NC_029033_p23 hypothetical protein singleton unknown function unknown function 1 12827 12946
YP_009220343.1 NC_029033_p42 head morphogenesis protein phrog_241 head morphogenesis head and packaging 1 22316 23350
YP_009220322.1 NC_029033_p21 hypothetical protein singleton unknown function unknown function 1 12161 12370
YP_009220333.1 NC_029033_p32 hypothetical protein singleton unknown function unknown function 1 15098 15355
YP_009220321.1 NC_029033_p20 hypothetical protein phrog_24619 unknown function unknown function 1 11911 12168
YP_009220336.1 NC_029033_p35 hypothetical protein phrog_7597 unknown function unknown function 1 16246 16920
YP_009220332.1 NC_029033_p31 hypothetical protein singleton unknown function unknown function 1 14889 15101
YP_009220359.1 NC_029033_p58 hypothetical protein phrog_329 minor tail protein tail 1 36541 36936
YP_009220325.1 NC_029033_p24 hypothetical protein singleton unknown function unknown function 1 12947 13039
YP_009220315.1 NC_029033_p14 hypothetical protein singleton unknown function unknown function 1 9450 9680
YP_009220331.1 NC_029033_p30 hypothetical protein singleton unknown function unknown function 1 14710 14892
YP_009220306.1 NC_029033_p5 hypothetical protein phrog_2480 unknown function unknown function -1 3467 3910
YP_009220345.1 NC_029033_p44 major capsid protein phrog_247 major head protein head and packaging 1 24156 25133
YP_009220304.1 NC_029033_p3 hypothetical protein singleton unknown function unknown function -1 1979 2659