Genomic map of Salmonella phage 37 (NC_029045)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029045
Definition
Salmonella phage 37, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chivirus; unclassified Chivirus.
DB of origin
REFSEQ
Length
60216
Host Name
Salmonella
Host domain
Bacteria
Is prophage?
undef
Number of proteins
105
%GC
56.52
Number of singletons
34
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009221398.1 NC_029045_p32 hypothetical protein singleton unknown function unknown function 1 21194 21526
YP_009221431.1 NC_029045_p65 hypothetical protein phrog_1934 unknown function unknown function -1 43085 43480
YP_009221436.1 NC_029045_p70 DNA-directed DNA polymerase protein family A phrog_9301 unknown function unknown function -1 44891 45202
YP_009221471.1 NC_029045_p105 hypothetical protein phrog_8116 unknown function unknown function 1 59409 59660
YP_009221384.1 NC_029045_p18 terminase large subunit phrog_15 terminase large subunit head and packaging 1 12475 13197
YP_009221443.1 NC_029045_p77 DNA adenine methyltransferase phrog_111 DNA methyltransferase other -1 47536 48222
YP_009221433.1 NC_029045_p67 hypothetical protein phrog_1714 unknown function unknown function -1 44193 44441
YP_009221377.1 NC_029045_p11 hypothetical protein singleton unknown function unknown function 1 7722 7901
YP_009221368.1 NC_029045_p2 helicase singleton unknown function unknown function -1 998 1432
YP_009221383.1 NC_029045_p17 terminase large subunit phrog_33134 terminase large subunit head and packaging 1 12044 12442
YP_009221470.1 NC_029045_p104 terminase large subunit phrog_7646 unknown function unknown function 1 59165 59416
YP_009221387.1 NC_029045_p21 portal protein phrog_21 portal protein head and packaging 1 13594 14865
YP_009221449.1 NC_029045_p83 major capsid protein phrog_7200 unknown function unknown function -1 51133 51366
YP_009221444.1 NC_029045_p78 hypothetical protein phrog_8386 unknown function unknown function -1 48222 49322
YP_009221391.1 NC_029045_p25 scaffolding protein phrog_49 head decoration head and packaging 1 16598 17017
YP_009221379.1 NC_029045_p13 hypothetical protein singleton unknown function unknown function 1 8910 9113
YP_009221408.1 NC_029045_p42 RepB phrog_28246 tail assembly protein tail 1 28277 28699
YP_009221382.1 NC_029045_p16 terminase large subunit phrog_15 terminase large subunit head and packaging 1 11262 12047
YP_009221386.1 NC_029045_p20 hypothetical protein singleton unknown function unknown function 1 13345 13530
YP_009221428.1 NC_029045_p62 hypothetical protein phrog_1275 Rz-like spanin lysis 1 41489 41692
YP_009221441.1 NC_029045_p75 hypothetical protein singleton unknown function unknown function -1 46485 46907
YP_009221423.1 NC_029045_p57 site-specific recombinase singleton unknown function unknown function 1 38066 38848
YP_009221409.1 NC_029045_p43 hypothetical protein phrog_1180 tail assembly chaperone tail 1 28711 28941
YP_009221435.1 NC_029045_p69 hypothetical protein phrog_33924 unknown function unknown function -1 44736 44894
YP_009221453.1 NC_029045_p87 viral integrase family 4 phrog_7734 unknown function unknown function -1 52750 53085
YP_009221396.1 NC_029045_p30 transposase phrog_5078 tail terminator connector 1 19441 19944
YP_009221454.1 NC_029045_p88 hypothetical protein phrog_7942 unknown function unknown function -1 53072 53512
YP_009221393.1 NC_029045_p27 hypothetical protein phrog_7559 unknown function unknown function 1 18156 18422
YP_009221468.1 NC_029045_p102 hypothetical protein phrog_3786 unknown function unknown function 1 58691 58963
YP_009221439.1 NC_029045_p73 hypothetical protein phrog_8705 unknown function unknown function -1 46063 46278
YP_009221385.1 NC_029045_p19 terminase large subunit singleton unknown function unknown function 1 13176 13334
YP_009221400.1 NC_029045_p34 capsid assembly protein phrog_35334 tail length tape measure protein tail 1 21746 21895
YP_009221464.1 NC_029045_p98 hypothetical protein singleton unknown function unknown function 1 57859 58203
YP_009221459.1 NC_029045_p93 DnaA C-terminal domain containing protein phrog_10759 unknown function unknown function 1 55923 56405
YP_009221432.1 NC_029045_p66 DNA methylase phrog_8098 unknown function unknown function -1 43477 44181
YP_009221434.1 NC_029045_p68 hypothetical protein phrog_8264 unknown function unknown function -1 44443 44727
YP_009221394.1 NC_029045_p28 hypothetical protein phrog_4858 unknown function unknown function 1 18453 18818
YP_009221380.1 NC_029045_p14 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 9242 10717
YP_009221462.1 NC_029045_p96 structural protein singleton unknown function unknown function 1 57316 57438
YP_009221440.1 NC_029045_p74 hypothetical protein singleton unknown function unknown function -1 46337 46474
YP_009221378.1 NC_029045_p12 hypothetical protein singleton unknown function unknown function 1 7910 8908
YP_009221421.1 NC_029045_p55 hypothetical protein phrog_31361 unknown function unknown function 1 37230 37691
YP_009221415.1 NC_029045_p49 PblB-type protein singleton unknown function unknown function 1 32174 32980
YP_009221460.1 NC_029045_p94 resolvase phrog_9514 unknown function unknown function 1 56419 56967
YP_009221456.1 NC_029045_p90 clamp loader subunit DNA polymerase accessory protein phrog_26477 clamp loader of DNA polymerase DNA, RNA and nucleotide metabolism 1 54710 55066
YP_009221438.1 NC_029045_p72 thymidylate synthase complementing protein ThyX phrog_9072 thymidylate synthase complementing protein DNA, RNA and nucleotide metabolism -1 45561 46073
YP_009221429.1 NC_029045_p63 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 41693 42154
YP_009221422.1 NC_029045_p56 tail protein P phrog_27578 unknown function unknown function 1 37757 38056
YP_009221467.1 NC_029045_p101 hypothetical protein phrog_33660 unknown function unknown function 1 58472 58687
YP_009221463.1 NC_029045_p97 tail component K-like protein singleton unknown function unknown function 1 57420 57761
YP_009221413.1 NC_029045_p47 minor capsid protein singleton unknown function unknown function 1 31354 31587
YP_009221403.1 NC_029045_p37 tail component phrog_23940 tail length tape measure protein tail 1 24477 26102
YP_009221414.1 NC_029045_p48 hypothetical protein singleton unknown function unknown function 1 31560 32219
YP_009221466.1 NC_029045_p100 ParB-like protein singleton unknown function unknown function 1 58309 58461
YP_009221425.1 NC_029045_p59 hypothetical protein phrog_7686 Rz-like spanin lysis 1 40257 40595
YP_009221412.1 NC_029045_p46 hypothetical protein singleton unknown function unknown function 1 30692 31357
YP_009221458.1 NC_029045_p92 transposase singleton unknown function unknown function -1 55766 55885
YP_009221370.1 NC_029045_p4 endolysin singleton unknown function unknown function -1 3562 3759
YP_009221401.1 NC_029045_p35 tail length tape measure protein singleton unknown function unknown function 1 21957 23786
YP_009221445.1 NC_029045_p79 hypothetical protein singleton unknown function unknown function -1 49426 49809
YP_009221395.1 NC_029045_p29 hypothetical protein phrog_27 tail completion or Neck1 protein connector 1 18818 19444
YP_009221426.1 NC_029045_p60 head-tail assembly protein phrog_873 endolysin head and packaging 1 40820 41311
YP_009221373.1 NC_029045_p7 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 6211 6807
YP_009221424.1 NC_029045_p58 capsid protein phrog_7226 unknown function unknown function 1 38800 40194
YP_009221405.1 NC_029045_p39 hypothetical protein singleton unknown function unknown function 1 26185 26892
YP_009221416.1 NC_029045_p50 portal protein phrog_7049 tail fiber protein tail 1 33127 33792
YP_009221389.1 NC_029045_p23 prohead protease phrog_53 head maturation protease head and packaging 1 15314 16183
YP_009221457.1 NC_029045_p91 hypothetical protein phrog_3199 unknown function unknown function 1 55167 55694
YP_009221417.1 NC_029045_p51 hypothetical protein phrog_2448 unknown function unknown function 1 33802 34809
YP_009221374.1 NC_029045_p8 DNA polymerase I singleton unknown function unknown function 1 6874 7116
YP_009221392.1 NC_029045_p26 major capsid protein phrog_29 major head protein head and packaging 1 17030 18094
YP_009221452.1 NC_029045_p86 hypothetical protein phrog_7965 unknown function unknown function -1 52422 52763
YP_009221388.1 NC_029045_p22 portal protein phrog_537 portal protein head and packaging 1 14883 15272
YP_009221461.1 NC_029045_p95 transposase singleton unknown function unknown function 1 56964 57128
YP_009221442.1 NC_029045_p76 transcriptional regulator singleton unknown function unknown function -1 46904 47458
YP_009221411.1 NC_029045_p45 cell wall amidase phrog_21247 tail protein tail 1 29169 30695
YP_009221469.1 NC_029045_p103 hypothetical protein phrog_8059 unknown function unknown function 1 58966 59172
YP_009221427.1 NC_029045_p61 long tail fiber proximal subunit phrog_15395 tail protein tail -1 41317 41487
YP_009221402.1 NC_029045_p36 tail length tape measure protein singleton unknown function unknown function 1 23767 24435
YP_009221371.1 NC_029045_p5 RecT protein singleton unknown function unknown function 1 4034 4198
YP_009221367.1 NC_029045_p1 hypothetical protein phrog_18318 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 563 889
YP_009221437.1 NC_029045_p71 hypothetical protein phrog_3012 unknown function unknown function -1 45199 45480
YP_009221372.1 NC_029045_p6 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 4819 6156
YP_009221407.1 NC_029045_p41 hypothetical protein phrog_35248 unknown function unknown function 1 27882 28244
YP_009221376.1 NC_029045_p10 DNA polymerase A domain singleton unknown function unknown function 1 7420 7740
YP_009221375.1 NC_029045_p9 hypothetical protein singleton unknown function unknown function 1 7097 7420
YP_009221448.1 NC_029045_p82 endolysin phrog_7587 unknown function unknown function -1 50853 51128
YP_009221399.1 NC_029045_p33 capsid protein singleton unknown function unknown function 1 21508 21654
YP_009221418.1 NC_029045_p52 hypothetical protein phrog_2448 unknown function unknown function 1 34820 35782
YP_009221404.1 NC_029045_p38 hypothetical protein singleton unknown function unknown function 1 26063 26179
YP_009221430.1 NC_029045_p64 structural protein phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover -1 42151 43065
YP_009221369.1 NC_029045_p3 primase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 1396 3516
YP_009221450.1 NC_029045_p84 major capsid protein phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism -1 51369 52256
YP_009221381.1 NC_029045_p15 hypothetical protein phrog_141 terminase small subunit head and packaging 1 10823 11272
YP_009221406.1 NC_029045_p40 hypothetical protein phrog_1082 tail assembly protein tail 1 26889 27872
YP_009221420.1 NC_029045_p54 minor structural protein singleton unknown function unknown function 1 36830 37123
YP_009221390.1 NC_029045_p24 prohead protease phrog_17040 head maturation protease head and packaging 1 16180 16539
YP_009221465.1 NC_029045_p99 hypothetical protein singleton unknown function unknown function 1 58182 58295
YP_009221451.1 NC_029045_p85 hypothetical protein phrog_34064 unknown function unknown function 1 52260 52427
YP_009221446.1 NC_029045_p80 hypothetical protein phrog_6886 unknown function unknown function -1 49919 50452
YP_009221447.1 NC_029045_p81 hypothetical protein phrog_38454 unknown function unknown function -1 50503 50658
YP_009221397.1 NC_029045_p31 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 19958 21097
YP_009221410.1 NC_029045_p44 tail tape measure protein phrog_1196 tail assembly chaperone tail 1 29030 29179
YP_009221455.1 NC_029045_p89 RecT family protein phrog_6647 unknown function unknown function -1 53584 53955
YP_009221419.1 NC_029045_p53 hypothetical protein phrog_2448 unknown function unknown function 1 35796 36815