| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_029045 |
Definition |
Salmonella phage 37, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chivirus; unclassified Chivirus. |
DB of origin |
REFSEQ |
Length |
60216 |
Host Name |
Salmonella |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
105 |
%GC |
56.52 |
Number of singletons |
34 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009221398.1 | NC_029045_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21194 | 21526 |
| YP_009221431.1 | NC_029045_p65 | hypothetical protein | phrog_1934 | unknown function | unknown function | -1 | 43085 | 43480 |
| YP_009221436.1 | NC_029045_p70 | DNA-directed DNA polymerase protein family A | phrog_9301 | unknown function | unknown function | -1 | 44891 | 45202 |
| YP_009221471.1 | NC_029045_p105 | hypothetical protein | phrog_8116 | unknown function | unknown function | 1 | 59409 | 59660 |
| YP_009221384.1 | NC_029045_p18 | terminase large subunit | phrog_15 | terminase large subunit | head and packaging | 1 | 12475 | 13197 |
| YP_009221443.1 | NC_029045_p77 | DNA adenine methyltransferase | phrog_111 | DNA methyltransferase | other | -1 | 47536 | 48222 |
| YP_009221433.1 | NC_029045_p67 | hypothetical protein | phrog_1714 | unknown function | unknown function | -1 | 44193 | 44441 |
| YP_009221377.1 | NC_029045_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7722 | 7901 |
| YP_009221368.1 | NC_029045_p2 | helicase | singleton | unknown function | unknown function | -1 | 998 | 1432 |
| YP_009221383.1 | NC_029045_p17 | terminase large subunit | phrog_33134 | terminase large subunit | head and packaging | 1 | 12044 | 12442 |
| YP_009221470.1 | NC_029045_p104 | terminase large subunit | phrog_7646 | unknown function | unknown function | 1 | 59165 | 59416 |
| YP_009221387.1 | NC_029045_p21 | portal protein | phrog_21 | portal protein | head and packaging | 1 | 13594 | 14865 |
| YP_009221449.1 | NC_029045_p83 | major capsid protein | phrog_7200 | unknown function | unknown function | -1 | 51133 | 51366 |
| YP_009221444.1 | NC_029045_p78 | hypothetical protein | phrog_8386 | unknown function | unknown function | -1 | 48222 | 49322 |
| YP_009221391.1 | NC_029045_p25 | scaffolding protein | phrog_49 | head decoration | head and packaging | 1 | 16598 | 17017 |
| YP_009221379.1 | NC_029045_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8910 | 9113 |
| YP_009221408.1 | NC_029045_p42 | RepB | phrog_28246 | tail assembly protein | tail | 1 | 28277 | 28699 |
| YP_009221382.1 | NC_029045_p16 | terminase large subunit | phrog_15 | terminase large subunit | head and packaging | 1 | 11262 | 12047 |
| YP_009221386.1 | NC_029045_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13345 | 13530 |
| YP_009221428.1 | NC_029045_p62 | hypothetical protein | phrog_1275 | Rz-like spanin | lysis | 1 | 41489 | 41692 |
| YP_009221441.1 | NC_029045_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46485 | 46907 |
| YP_009221423.1 | NC_029045_p57 | site-specific recombinase | singleton | unknown function | unknown function | 1 | 38066 | 38848 |
| YP_009221409.1 | NC_029045_p43 | hypothetical protein | phrog_1180 | tail assembly chaperone | tail | 1 | 28711 | 28941 |
| YP_009221435.1 | NC_029045_p69 | hypothetical protein | phrog_33924 | unknown function | unknown function | -1 | 44736 | 44894 |
| YP_009221453.1 | NC_029045_p87 | viral integrase family 4 | phrog_7734 | unknown function | unknown function | -1 | 52750 | 53085 |
| YP_009221396.1 | NC_029045_p30 | transposase | phrog_5078 | tail terminator | connector | 1 | 19441 | 19944 |
| YP_009221454.1 | NC_029045_p88 | hypothetical protein | phrog_7942 | unknown function | unknown function | -1 | 53072 | 53512 |
| YP_009221393.1 | NC_029045_p27 | hypothetical protein | phrog_7559 | unknown function | unknown function | 1 | 18156 | 18422 |
| YP_009221468.1 | NC_029045_p102 | hypothetical protein | phrog_3786 | unknown function | unknown function | 1 | 58691 | 58963 |
| YP_009221439.1 | NC_029045_p73 | hypothetical protein | phrog_8705 | unknown function | unknown function | -1 | 46063 | 46278 |
| YP_009221385.1 | NC_029045_p19 | terminase large subunit | singleton | unknown function | unknown function | 1 | 13176 | 13334 |
| YP_009221400.1 | NC_029045_p34 | capsid assembly protein | phrog_35334 | tail length tape measure protein | tail | 1 | 21746 | 21895 |
| YP_009221464.1 | NC_029045_p98 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57859 | 58203 |
| YP_009221459.1 | NC_029045_p93 | DnaA C-terminal domain containing protein | phrog_10759 | unknown function | unknown function | 1 | 55923 | 56405 |
| YP_009221432.1 | NC_029045_p66 | DNA methylase | phrog_8098 | unknown function | unknown function | -1 | 43477 | 44181 |
| YP_009221434.1 | NC_029045_p68 | hypothetical protein | phrog_8264 | unknown function | unknown function | -1 | 44443 | 44727 |
| YP_009221394.1 | NC_029045_p28 | hypothetical protein | phrog_4858 | unknown function | unknown function | 1 | 18453 | 18818 |
| YP_009221380.1 | NC_029045_p14 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 9242 | 10717 |
| YP_009221462.1 | NC_029045_p96 | structural protein | singleton | unknown function | unknown function | 1 | 57316 | 57438 |
| YP_009221440.1 | NC_029045_p74 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46337 | 46474 |
| YP_009221378.1 | NC_029045_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7910 | 8908 |
| YP_009221421.1 | NC_029045_p55 | hypothetical protein | phrog_31361 | unknown function | unknown function | 1 | 37230 | 37691 |
| YP_009221415.1 | NC_029045_p49 | PblB-type protein | singleton | unknown function | unknown function | 1 | 32174 | 32980 |
| YP_009221460.1 | NC_029045_p94 | resolvase | phrog_9514 | unknown function | unknown function | 1 | 56419 | 56967 |
| YP_009221456.1 | NC_029045_p90 | clamp loader subunit DNA polymerase accessory protein | phrog_26477 | clamp loader of DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 54710 | 55066 |
| YP_009221438.1 | NC_029045_p72 | thymidylate synthase complementing protein ThyX | phrog_9072 | thymidylate synthase complementing protein | DNA, RNA and nucleotide metabolism | -1 | 45561 | 46073 |
| YP_009221429.1 | NC_029045_p63 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | -1 | 41693 | 42154 |
| YP_009221422.1 | NC_029045_p56 | tail protein P | phrog_27578 | unknown function | unknown function | 1 | 37757 | 38056 |
| YP_009221467.1 | NC_029045_p101 | hypothetical protein | phrog_33660 | unknown function | unknown function | 1 | 58472 | 58687 |
| YP_009221463.1 | NC_029045_p97 | tail component K-like protein | singleton | unknown function | unknown function | 1 | 57420 | 57761 |
| YP_009221413.1 | NC_029045_p47 | minor capsid protein | singleton | unknown function | unknown function | 1 | 31354 | 31587 |
| YP_009221403.1 | NC_029045_p37 | tail component | phrog_23940 | tail length tape measure protein | tail | 1 | 24477 | 26102 |
| YP_009221414.1 | NC_029045_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31560 | 32219 |
| YP_009221466.1 | NC_029045_p100 | ParB-like protein | singleton | unknown function | unknown function | 1 | 58309 | 58461 |
| YP_009221425.1 | NC_029045_p59 | hypothetical protein | phrog_7686 | Rz-like spanin | lysis | 1 | 40257 | 40595 |
| YP_009221412.1 | NC_029045_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30692 | 31357 |
| YP_009221458.1 | NC_029045_p92 | transposase | singleton | unknown function | unknown function | -1 | 55766 | 55885 |
| YP_009221370.1 | NC_029045_p4 | endolysin | singleton | unknown function | unknown function | -1 | 3562 | 3759 |
| YP_009221401.1 | NC_029045_p35 | tail length tape measure protein | singleton | unknown function | unknown function | 1 | 21957 | 23786 |
| YP_009221445.1 | NC_029045_p79 | hypothetical protein | singleton | unknown function | unknown function | -1 | 49426 | 49809 |
| YP_009221395.1 | NC_029045_p29 | hypothetical protein | phrog_27 | tail completion or Neck1 protein | connector | 1 | 18818 | 19444 |
| YP_009221426.1 | NC_029045_p60 | head-tail assembly protein | phrog_873 | endolysin | head and packaging | 1 | 40820 | 41311 |
| YP_009221373.1 | NC_029045_p7 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 6211 | 6807 |
| YP_009221424.1 | NC_029045_p58 | capsid protein | phrog_7226 | unknown function | unknown function | 1 | 38800 | 40194 |
| YP_009221405.1 | NC_029045_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26185 | 26892 |
| YP_009221416.1 | NC_029045_p50 | portal protein | phrog_7049 | tail fiber protein | tail | 1 | 33127 | 33792 |
| YP_009221389.1 | NC_029045_p23 | prohead protease | phrog_53 | head maturation protease | head and packaging | 1 | 15314 | 16183 |
| YP_009221457.1 | NC_029045_p91 | hypothetical protein | phrog_3199 | unknown function | unknown function | 1 | 55167 | 55694 |
| YP_009221417.1 | NC_029045_p51 | hypothetical protein | phrog_2448 | unknown function | unknown function | 1 | 33802 | 34809 |
| YP_009221374.1 | NC_029045_p8 | DNA polymerase I | singleton | unknown function | unknown function | 1 | 6874 | 7116 |
| YP_009221392.1 | NC_029045_p26 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 17030 | 18094 |
| YP_009221452.1 | NC_029045_p86 | hypothetical protein | phrog_7965 | unknown function | unknown function | -1 | 52422 | 52763 |
| YP_009221388.1 | NC_029045_p22 | portal protein | phrog_537 | portal protein | head and packaging | 1 | 14883 | 15272 |
| YP_009221461.1 | NC_029045_p95 | transposase | singleton | unknown function | unknown function | 1 | 56964 | 57128 |
| YP_009221442.1 | NC_029045_p76 | transcriptional regulator | singleton | unknown function | unknown function | -1 | 46904 | 47458 |
| YP_009221411.1 | NC_029045_p45 | cell wall amidase | phrog_21247 | tail protein | tail | 1 | 29169 | 30695 |
| YP_009221469.1 | NC_029045_p103 | hypothetical protein | phrog_8059 | unknown function | unknown function | 1 | 58966 | 59172 |
| YP_009221427.1 | NC_029045_p61 | long tail fiber proximal subunit | phrog_15395 | tail protein | tail | -1 | 41317 | 41487 |
| YP_009221402.1 | NC_029045_p36 | tail length tape measure protein | singleton | unknown function | unknown function | 1 | 23767 | 24435 |
| YP_009221371.1 | NC_029045_p5 | RecT protein | singleton | unknown function | unknown function | 1 | 4034 | 4198 |
| YP_009221367.1 | NC_029045_p1 | hypothetical protein | phrog_18318 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 563 | 889 |
| YP_009221437.1 | NC_029045_p71 | hypothetical protein | phrog_3012 | unknown function | unknown function | -1 | 45199 | 45480 |
| YP_009221372.1 | NC_029045_p6 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 4819 | 6156 |
| YP_009221407.1 | NC_029045_p41 | hypothetical protein | phrog_35248 | unknown function | unknown function | 1 | 27882 | 28244 |
| YP_009221376.1 | NC_029045_p10 | DNA polymerase A domain | singleton | unknown function | unknown function | 1 | 7420 | 7740 |
| YP_009221375.1 | NC_029045_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7097 | 7420 |
| YP_009221448.1 | NC_029045_p82 | endolysin | phrog_7587 | unknown function | unknown function | -1 | 50853 | 51128 |
| YP_009221399.1 | NC_029045_p33 | capsid protein | singleton | unknown function | unknown function | 1 | 21508 | 21654 |
| YP_009221418.1 | NC_029045_p52 | hypothetical protein | phrog_2448 | unknown function | unknown function | 1 | 34820 | 35782 |
| YP_009221404.1 | NC_029045_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26063 | 26179 |
| YP_009221430.1 | NC_029045_p64 | structural protein | phrog_424 | phosphoadenosine phosphosulfate reductase | moron, auxiliary metabolic gene and host takeover | -1 | 42151 | 43065 |
| YP_009221369.1 | NC_029045_p3 | primase | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 1396 | 3516 |
| YP_009221450.1 | NC_029045_p84 | major capsid protein | phrog_724 | exonuclease recombination-associated | DNA, RNA and nucleotide metabolism | -1 | 51369 | 52256 |
| YP_009221381.1 | NC_029045_p15 | hypothetical protein | phrog_141 | terminase small subunit | head and packaging | 1 | 10823 | 11272 |
| YP_009221406.1 | NC_029045_p40 | hypothetical protein | phrog_1082 | tail assembly protein | tail | 1 | 26889 | 27872 |
| YP_009221420.1 | NC_029045_p54 | minor structural protein | singleton | unknown function | unknown function | 1 | 36830 | 37123 |
| YP_009221390.1 | NC_029045_p24 | prohead protease | phrog_17040 | head maturation protease | head and packaging | 1 | 16180 | 16539 |
| YP_009221465.1 | NC_029045_p99 | hypothetical protein | singleton | unknown function | unknown function | 1 | 58182 | 58295 |
| YP_009221451.1 | NC_029045_p85 | hypothetical protein | phrog_34064 | unknown function | unknown function | 1 | 52260 | 52427 |
| YP_009221446.1 | NC_029045_p80 | hypothetical protein | phrog_6886 | unknown function | unknown function | -1 | 49919 | 50452 |
| YP_009221447.1 | NC_029045_p81 | hypothetical protein | phrog_38454 | unknown function | unknown function | -1 | 50503 | 50658 |
| YP_009221397.1 | NC_029045_p31 | hypothetical protein | phrog_807 | major tail protein with Ig-like domain | tail | 1 | 19958 | 21097 |
| YP_009221410.1 | NC_029045_p44 | tail tape measure protein | phrog_1196 | tail assembly chaperone | tail | 1 | 29030 | 29179 |
| YP_009221455.1 | NC_029045_p89 | RecT family protein | phrog_6647 | unknown function | unknown function | -1 | 53584 | 53955 |
| YP_009221419.1 | NC_029045_p53 | hypothetical protein | phrog_2448 | unknown function | unknown function | 1 | 35796 | 36815 |