| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_029059 |
Definition |
Mycobacterium phage Edtherson, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
REFSEQ |
Length |
51492 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
91 |
%GC |
63.97 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009222446.1 | NC_029059_p84 | hypothetical protein | phrog_5533 | unknown function | unknown function | -1 | 49144 | 49329 |
| YP_009222392.1 | NC_029059_p30 | hypothetical protein | phrog_981 | minor tail protein | tail | 1 | 24181 | 24513 |
| YP_009222379.1 | NC_029059_p17 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 13186 | 13704 |
| YP_009222433.1 | NC_029059_p71 | hypothetical protein | phrog_5947 | unknown function | unknown function | -1 | 45031 | 45198 |
| YP_009222408.1 | NC_029059_p46 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 35312 | 35542 |
| YP_009222403.1 | NC_029059_p41 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 32535 | 32705 |
| YP_009222427.1 | NC_029059_p65 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 42890 | 43180 |
| YP_009222364.1 | NC_029059_p2 | HNH endonuclease domain protein | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 749 | 1045 |
| YP_009222386.1 | NC_029059_p24 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 16242 | 16718 |
| YP_009222405.1 | NC_029059_p43 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 32794 | 33072 |
| YP_009222367.1 | NC_029059_p5 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 2210 | 3280 |
| YP_009222387.1 | NC_029059_p25 | tapemeasure | phrog_305 | tail length tape measure protein | tail | 1 | 17152 | 19623 |
| YP_009222378.1 | NC_029059_p16 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 12091 | 13107 |
| YP_009222370.1 | NC_029059_p8 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4273 | 4530 |
| YP_009222394.1 | NC_029059_p32 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 24835 | 26688 |
| YP_009222435.1 | NC_029059_p73 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 45509 | 45904 |
| YP_009222406.1 | NC_029059_p44 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 33069 | 33428 |
| YP_009222440.1 | NC_029059_p78 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 47482 | 47670 |
| YP_009222404.1 | NC_029059_p42 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 32702 | 32788 |
| YP_009222373.1 | NC_029059_p11 | lysin B | phrog_102 | endolysin | lysis | 1 | 6516 | 7484 |
| YP_009222438.1 | NC_029059_p76 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 47016 | 47285 |
| YP_009222374.1 | NC_029059_p12 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 7504 | 9192 |
| YP_009222363.1 | NC_029059_p1 | hypothetical protein | phrog_4649 | unknown function | unknown function | 1 | 600 | 752 |
| YP_009222401.1 | NC_029059_p39 | hypothetical protein | phrog_27933 | unknown function | unknown function | -1 | 31863 | 32255 |
| YP_009222420.1 | NC_029059_p58 | DNA methylase | phrog_67 | DNA methyltransferase | other | -1 | 39680 | 40825 |
| YP_009222432.1 | NC_029059_p70 | hypothetical protein | phrog_6068 | unknown function | unknown function | -1 | 44787 | 45038 |
| YP_009222396.1 | NC_029059_p34 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28252 | 28572 |
| YP_009222376.1 | NC_029059_p14 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10628 | 11509 |
| YP_009222449.1 | NC_029059_p87 | hypothetical protein | phrog_828 | unknown function | unknown function | 1 | 49832 | 50038 |
| YP_009222422.1 | NC_029059_p60 | hypothetical protein | phrog_1019 | unknown function | unknown function | -1 | 41303 | 41389 |
| YP_009222418.1 | NC_029059_p56 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 39365 | 39523 |
| YP_009222416.1 | NC_029059_p54 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38504 | 39025 |
| YP_009222445.1 | NC_029059_p83 | hypothetical protein | phrog_5017 | unknown function | unknown function | -1 | 48812 | 49144 |
| YP_009222425.1 | NC_029059_p63 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 42457 | 42603 |
| YP_009222395.1 | NC_029059_p33 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 26681 | 28159 |
| YP_009222413.1 | NC_029059_p51 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | -1 | 37169 | 37936 |
| YP_009222381.1 | NC_029059_p19 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 14153 | 14515 |
| YP_009222423.1 | NC_029059_p61 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 41386 | 41661 |
| YP_009222430.1 | NC_029059_p68 | hypothetical protein | phrog_27003 | unknown function | unknown function | -1 | 44193 | 44414 |
| YP_009222407.1 | NC_029059_p45 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 33449 | 35275 |
| YP_009222452.1 | NC_029059_p90 | hypothetical protein | phrog_3574 | unknown function | unknown function | 1 | 50521 | 50709 |
| YP_009222393.1 | NC_029059_p31 | hypothetical protein | phrog_1397 | unknown function | unknown function | 1 | 24516 | 24809 |
| YP_009222372.1 | NC_029059_p10 | lysin A | phrog_317 | endolysin | lysis | 1 | 5105 | 6526 |
| YP_009222419.1 | NC_029059_p57 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39520 | 39654 |
| YP_009222365.1 | NC_029059_p3 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 1081 | 1521 |
| YP_009222436.1 | NC_029059_p74 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 45946 | 46515 |
| YP_009222390.1 | NC_029059_p28 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21883 | 23685 |
| YP_009222385.1 | NC_029059_p23 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 16242 | 17140 |
| YP_009222411.1 | NC_029059_p49 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 36240 | 37031 |
| YP_009222397.1 | NC_029059_p35 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 28582 | 28773 |
| YP_009222409.1 | NC_029059_p47 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 35573 | 36064 |
| YP_009222412.1 | NC_029059_p50 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 37024 | 37164 |
| YP_009222453.1 | NC_029059_p91 | hypothetical protein | phrog_15028 | unknown function | unknown function | 1 | 50755 | 51237 |
| YP_009222399.1 | NC_029059_p37 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29850 | 30134 |
| YP_009222428.1 | NC_029059_p66 | hypothetical protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 43184 | 43366 |
| YP_009222437.1 | NC_029059_p75 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 46720 | 47019 |
| YP_009222444.1 | NC_029059_p82 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 48123 | 48275 |
| YP_009222450.1 | NC_029059_p88 | hypothetical protein | phrog_11620 | unknown function | unknown function | 1 | 50035 | 50199 |
| YP_009222389.1 | NC_029059_p27 | hypothetical protein | phrog_1543 | minor tail protein | tail | 1 | 21701 | 21883 |
| YP_009222443.1 | NC_029059_p81 | hypothetical protein | phrog_17075 | unknown function | unknown function | -1 | 47959 | 48105 |
| YP_009222439.1 | NC_029059_p77 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 47282 | 47485 |
| YP_009222421.1 | NC_029059_p59 | EndoVII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 40822 | 41316 |
| YP_009222398.1 | NC_029059_p36 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 28770 | 29729 |
| YP_009222441.1 | NC_029059_p79 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47670 | 47837 |
| YP_009222451.1 | NC_029059_p89 | hypothetical protein | phrog_13961 | unknown function | unknown function | -1 | 50255 | 50440 |
| YP_009222417.1 | NC_029059_p55 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38871 | 39386 |
| YP_009222382.1 | NC_029059_p20 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 14515 | 14910 |
| YP_009222402.1 | NC_029059_p40 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 32272 | 32538 |
| YP_009222368.1 | NC_029059_p6 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 3299 | 3991 |
| YP_009222375.1 | NC_029059_p13 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 9189 | 10631 |
| YP_009222377.1 | NC_029059_p15 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11568 | 12080 |
| YP_009222371.1 | NC_029059_p9 | hypothetical protein | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 4530 | 5108 |
| YP_009222442.1 | NC_029059_p80 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 47834 | 47962 |
| YP_009222447.1 | NC_029059_p85 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 49359 | 49478 |
| YP_009222391.1 | NC_029059_p29 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 23723 | 24169 |
| YP_009222434.1 | NC_029059_p72 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 45195 | 45512 |
| YP_009222388.1 | NC_029059_p26 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 19647 | 21704 |
| YP_009222383.1 | NC_029059_p21 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 14914 | 15360 |
| YP_009222384.1 | NC_029059_p22 | major tail protein | phrog_117 | major tail protein | tail | 1 | 15369 | 16220 |
| YP_009222380.1 | NC_029059_p18 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 13704 | 14153 |
| YP_009222426.1 | NC_029059_p64 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 42600 | 42893 |
| YP_009222415.1 | NC_029059_p53 | hypothetical protein | phrog_474 | phosphofructokinase | other | -1 | 38109 | 38507 |
| YP_009222424.1 | NC_029059_p62 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 41661 | 42470 |
| YP_009222369.1 | NC_029059_p7 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 4005 | 4265 |
| YP_009222400.1 | NC_029059_p38 | integrase | phrog_95 | integrase | integration and excision | 1 | 30287 | 31789 |
| YP_009222410.1 | NC_029059_p48 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 36061 | 36243 |
| YP_009222431.1 | NC_029059_p69 | hypothetical protein | phrog_23949 | unknown function | unknown function | -1 | 44411 | 44803 |
| YP_009222366.1 | NC_029059_p4 | hypothetical protein | phrog_2830 | unknown function | unknown function | 1 | 1699 | 1905 |
| YP_009222429.1 | NC_029059_p67 | RecB-like protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43393 | 44196 |
| YP_009222448.1 | NC_029059_p86 | hypothetical protein | phrog_2985 | unknown function | unknown function | 1 | 49594 | 49749 |
| YP_009222414.1 | NC_029059_p52 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 37933 | 38112 |