Genomic map of Mycobacterium phage Edtherson (NC_029059)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029059
Definition
Mycobacterium phage Edtherson, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
51492
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
63.97
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009222446.1 NC_029059_p84 hypothetical protein phrog_5533 unknown function unknown function -1 49144 49329
YP_009222392.1 NC_029059_p30 hypothetical protein phrog_981 minor tail protein tail 1 24181 24513
YP_009222379.1 NC_029059_p17 hypothetical protein phrog_1857 head-tail connector protein connector 1 13186 13704
YP_009222433.1 NC_029059_p71 hypothetical protein phrog_5947 unknown function unknown function -1 45031 45198
YP_009222408.1 NC_029059_p46 hypothetical protein phrog_1781 unknown function unknown function -1 35312 35542
YP_009222403.1 NC_029059_p41 hypothetical protein phrog_2035 unknown function unknown function -1 32535 32705
YP_009222427.1 NC_029059_p65 hypothetical protein phrog_2184 unknown function unknown function -1 42890 43180
YP_009222364.1 NC_029059_p2 HNH endonuclease domain protein phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 749 1045
YP_009222386.1 NC_029059_p24 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16242 16718
YP_009222405.1 NC_029059_p43 hypothetical protein phrog_1971 unknown function unknown function -1 32794 33072
YP_009222367.1 NC_029059_p5 hypothetical protein phrog_1197 tail protein tail 1 2210 3280
YP_009222387.1 NC_029059_p25 tapemeasure phrog_305 tail length tape measure protein tail 1 17152 19623
YP_009222378.1 NC_029059_p16 major capsid protein phrog_10 major head protein head and packaging 1 12091 13107
YP_009222370.1 NC_029059_p8 hypothetical protein phrog_747 unknown function unknown function 1 4273 4530
YP_009222394.1 NC_029059_p32 minor tail protein phrog_346 minor tail protein tail 1 24835 26688
YP_009222435.1 NC_029059_p73 hypothetical protein phrog_1809 unknown function unknown function -1 45509 45904
YP_009222406.1 NC_029059_p44 hypothetical protein phrog_383 unknown function unknown function -1 33069 33428
YP_009222440.1 NC_029059_p78 hypothetical protein phrog_1155 unknown function unknown function -1 47482 47670
YP_009222404.1 NC_029059_p42 hypothetical protein phrog_1860 unknown function unknown function -1 32702 32788
YP_009222373.1 NC_029059_p11 lysin B phrog_102 endolysin lysis 1 6516 7484
YP_009222438.1 NC_029059_p76 hypothetical protein phrog_1720 unknown function unknown function -1 47016 47285
YP_009222374.1 NC_029059_p12 terminase large subunit phrog_9 terminase large subunit head and packaging 1 7504 9192
YP_009222363.1 NC_029059_p1 hypothetical protein phrog_4649 unknown function unknown function 1 600 752
YP_009222401.1 NC_029059_p39 hypothetical protein phrog_27933 unknown function unknown function -1 31863 32255
YP_009222420.1 NC_029059_p58 DNA methylase phrog_67 DNA methyltransferase other -1 39680 40825
YP_009222432.1 NC_029059_p70 hypothetical protein phrog_6068 unknown function unknown function -1 44787 45038
YP_009222396.1 NC_029059_p34 hypothetical protein phrog_644 unknown function unknown function 1 28252 28572
YP_009222376.1 NC_029059_p14 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10628 11509
YP_009222449.1 NC_029059_p87 hypothetical protein phrog_828 unknown function unknown function 1 49832 50038
YP_009222422.1 NC_029059_p60 hypothetical protein phrog_1019 unknown function unknown function -1 41303 41389
YP_009222418.1 NC_029059_p56 hypothetical protein phrog_1783 unknown function unknown function -1 39365 39523
YP_009222416.1 NC_029059_p54 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38504 39025
YP_009222445.1 NC_029059_p83 hypothetical protein phrog_5017 unknown function unknown function -1 48812 49144
YP_009222425.1 NC_029059_p63 hypothetical protein phrog_1705 unknown function unknown function -1 42457 42603
YP_009222395.1 NC_029059_p33 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 26681 28159
YP_009222413.1 NC_029059_p51 hypothetical protein phrog_221 metallo-phosphoesterase other -1 37169 37936
YP_009222381.1 NC_029059_p19 hypothetical protein phrog_320 head closure Hc1 connector 1 14153 14515
YP_009222423.1 NC_029059_p61 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 41386 41661
YP_009222430.1 NC_029059_p68 hypothetical protein phrog_27003 unknown function unknown function -1 44193 44414
YP_009222407.1 NC_029059_p45 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 33449 35275
YP_009222452.1 NC_029059_p90 hypothetical protein phrog_3574 unknown function unknown function 1 50521 50709
YP_009222393.1 NC_029059_p31 hypothetical protein phrog_1397 unknown function unknown function 1 24516 24809
YP_009222372.1 NC_029059_p10 lysin A phrog_317 endolysin lysis 1 5105 6526
YP_009222419.1 NC_029059_p57 hypothetical protein phrog_397 unknown function unknown function -1 39520 39654
YP_009222365.1 NC_029059_p3 hypothetical protein phrog_226 minor tail protein tail 1 1081 1521
YP_009222436.1 NC_029059_p74 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45946 46515
YP_009222390.1 NC_029059_p28 minor tail protein phrog_110 minor tail protein tail 1 21883 23685
YP_009222385.1 NC_029059_p23 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16242 17140
YP_009222411.1 NC_029059_p49 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36240 37031
YP_009222397.1 NC_029059_p35 hypothetical protein phrog_1560 unknown function unknown function 1 28582 28773
YP_009222409.1 NC_029059_p47 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35573 36064
YP_009222412.1 NC_029059_p50 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 37024 37164
YP_009222453.1 NC_029059_p91 hypothetical protein phrog_15028 unknown function unknown function 1 50755 51237
YP_009222399.1 NC_029059_p37 hypothetical protein phrog_411 unknown function unknown function 1 29850 30134
YP_009222428.1 NC_029059_p66 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 43184 43366
YP_009222437.1 NC_029059_p75 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46720 47019
YP_009222444.1 NC_029059_p82 hypothetical protein phrog_932 unknown function unknown function -1 48123 48275
YP_009222450.1 NC_029059_p88 hypothetical protein phrog_11620 unknown function unknown function 1 50035 50199
YP_009222389.1 NC_029059_p27 hypothetical protein phrog_1543 minor tail protein tail 1 21701 21883
YP_009222443.1 NC_029059_p81 hypothetical protein phrog_17075 unknown function unknown function -1 47959 48105
YP_009222439.1 NC_029059_p77 hypothetical protein phrog_1387 unknown function unknown function -1 47282 47485
YP_009222421.1 NC_029059_p59 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40822 41316
YP_009222398.1 NC_029059_p36 hypothetical protein phrog_754 minor tail protein tail 1 28770 29729
YP_009222441.1 NC_029059_p79 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 47670 47837
YP_009222451.1 NC_029059_p89 hypothetical protein phrog_13961 unknown function unknown function -1 50255 50440
YP_009222417.1 NC_029059_p55 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38871 39386
YP_009222382.1 NC_029059_p20 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 14515 14910
YP_009222402.1 NC_029059_p40 hypothetical protein phrog_1966 unknown function unknown function -1 32272 32538
YP_009222368.1 NC_029059_p6 hypothetical protein phrog_553 minor tail protein tail 1 3299 3991
YP_009222375.1 NC_029059_p13 portal protein phrog_104 portal protein head and packaging 1 9189 10631
YP_009222377.1 NC_029059_p15 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11568 12080
YP_009222371.1 NC_029059_p9 hypothetical protein phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism 1 4530 5108
YP_009222442.1 NC_029059_p80 hypothetical protein phrog_2093 unknown function unknown function -1 47834 47962
YP_009222447.1 NC_029059_p85 hypothetical protein phrog_2212 unknown function unknown function -1 49359 49478
YP_009222391.1 NC_029059_p29 hypothetical protein phrog_352 minor tail protein tail 1 23723 24169
YP_009222434.1 NC_029059_p72 hypothetical protein phrog_1584 unknown function unknown function -1 45195 45512
YP_009222388.1 NC_029059_p26 minor tail protein phrog_106 minor tail protein tail 1 19647 21704
YP_009222383.1 NC_029059_p21 hypothetical protein phrog_123 tail terminator connector 1 14914 15360
YP_009222384.1 NC_029059_p22 major tail protein phrog_117 major tail protein tail 1 15369 16220
YP_009222380.1 NC_029059_p18 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13704 14153
YP_009222426.1 NC_029059_p64 hypothetical protein phrog_520 unknown function unknown function -1 42600 42893
YP_009222415.1 NC_029059_p53 hypothetical protein phrog_474 phosphofructokinase other -1 38109 38507
YP_009222424.1 NC_029059_p62 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41661 42470
YP_009222369.1 NC_029059_p7 hypothetical protein phrog_1718 tail protein tail 1 4005 4265
YP_009222400.1 NC_029059_p38 integrase phrog_95 integrase integration and excision 1 30287 31789
YP_009222410.1 NC_029059_p48 hypothetical protein phrog_499 unknown function unknown function -1 36061 36243
YP_009222431.1 NC_029059_p69 hypothetical protein phrog_23949 unknown function unknown function -1 44411 44803
YP_009222366.1 NC_029059_p4 hypothetical protein phrog_2830 unknown function unknown function 1 1699 1905
YP_009222429.1 NC_029059_p67 RecB-like protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43393 44196
YP_009222448.1 NC_029059_p86 hypothetical protein phrog_2985 unknown function unknown function 1 49594 49749
YP_009222414.1 NC_029059_p52 hypothetical protein phrog_1503 unknown function unknown function -1 37933 38112