Genomic map of Lactobacillus phage LfeSau (NC_029068)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029068
Definition
Lactobacillus phage LfeSau, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
31703
Host Name
Lactobacillus fermentum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
48.02
Number of singletons
16
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009223143.1 NC_029068_p43 hypothetical protein singleton unknown function unknown function 1 29276 29434
YP_009223131.1 NC_029068_p31 hypothetical protein singleton unknown function unknown function 1 22239 22382
YP_009223123.1 NC_029068_p23 hypothetical protein phrog_2609 holin lysis 1 17800 18204
YP_009223139.1 NC_029068_p39 DNA primase phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 26434 27213
YP_009223146.1 NC_029068_p46 hypothetical protein singleton unknown function unknown function 1 29884 30018
YP_009223108.1 NC_029068_p8 capsid protein phrog_544 major head protein head and packaging 1 5494 6378
YP_009223140.1 NC_029068_p40 hypothetical protein phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism 1 27214 28446
YP_009223102.1 NC_029068_p2 hypothetical protein singleton unknown function unknown function 1 549 701
YP_009223118.1 NC_029068_p18 structural protein phrog_1330 tail protein tail 1 13210 16677
YP_009223148.1 NC_029068_p48 hypothetical protein singleton unknown function unknown function 1 30325 30582
YP_009223129.1 NC_029068_p29 hypothetical protein phrog_4980 superinfection exclusion moron, auxiliary metabolic gene and host takeover 1 21451 21924
YP_009223132.1 NC_029068_p32 DNA-binding protein singleton unknown function unknown function 1 22398 22727
YP_009223126.1 NC_029068_p26 hypothetical protein singleton unknown function unknown function 1 20357 20587
YP_009223110.1 NC_029068_p10 hypothetical protein phrog_348 minor head protein head and packaging 1 6784 7092
YP_009223116.1 NC_029068_p16 tape measure protein phrog_5493 tail length tape measure protein tail 1 9295 12414
YP_009223130.1 NC_029068_p30 hypothetical protein singleton unknown function unknown function 1 21961 22149
YP_009223107.1 NC_029068_p7 hypothetical protein phrog_2932 head scaffolding protein head and packaging 1 4878 5480
YP_009223101.1 NC_029068_p1 terminase small subunit phrog_51 terminase small subunit head and packaging 1 131 565
YP_009223128.1 NC_029068_p28 transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 21130 21333
YP_009223149.1 NC_029068_p49 hypothetical protein singleton unknown function unknown function 1 30685 31119
YP_009223122.1 NC_029068_p22 hypothetical protein phrog_3671 unknown function unknown function 1 17648 17803
YP_009223124.1 NC_029068_p24 endolysin phrog_291 endolysin lysis 1 18217 19110
YP_009223120.1 NC_029068_p20 hypothetical protein phrog_2566 unknown function unknown function 1 16816 17187
YP_009223144.1 NC_029068_p44 hypothetical protein singleton unknown function unknown function 1 29421 29609
YP_009223121.1 NC_029068_p21 hypothetical protein phrog_11342 unknown function unknown function 1 17266 17643
YP_009223145.1 NC_029068_p45 hypothetical protein phrog_419 unknown function unknown function 1 29634 29930
YP_009223150.1 NC_029068_p50 transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 31132 31596
YP_009223111.1 NC_029068_p11 head/tail component phrog_5 tail completion or Neck1 protein connector 1 7085 7441
YP_009223112.1 NC_029068_p12 hypothetical protein phrog_176 tail terminator connector 1 7441 7836
YP_009223106.1 NC_029068_p6 hypothetical protein singleton unknown function unknown function 1 4560 4778
YP_009223113.1 NC_029068_p13 major tail protein phrog_238 major tail protein tail 1 7852 8451
YP_009223135.1 NC_029068_p35 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 23208 23687
YP_009223137.1 NC_029068_p37 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 25074 25838
YP_009223105.1 NC_029068_p5 head morphogenesis protein phrog_115 minor head protein head and packaging 1 3399 4430
YP_009223114.1 NC_029068_p14 tapemeasure chaperone protein phrog_441 tail assembly chaperone tail 1 8530 9302
YP_009223136.1 NC_029068_p36 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 23688 25058
YP_009223138.1 NC_029068_p38 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 25843 26358
YP_009223133.1 NC_029068_p33 hypothetical protein singleton unknown function unknown function 1 22741 22917
YP_009223103.1 NC_029068_p3 terminase large subunit phrog_2 terminase large subunit head and packaging 1 739 2004
YP_009223115.1 NC_029068_p15 tapemeasure chaperone protein phrog_183 tail chaperone protein tail 1 8530 8862
YP_009223127.1 NC_029068_p27 hypothetical protein singleton unknown function unknown function 1 20708 20959
YP_009223109.1 NC_029068_p9 DNA packaging protein phrog_132 head-tail adaptor connector 1 6423 6794
YP_009223117.1 NC_029068_p17 tail protein phrog_33 distal tail protein Dit tail 1 12428 13213
YP_009223104.1 NC_029068_p4 portal protein phrog_64 portal protein head and packaging 1 2018 3424
YP_009223142.1 NC_029068_p42 hypothetical protein singleton unknown function unknown function 1 29121 29264
YP_009223147.1 NC_029068_p47 hypothetical protein singleton unknown function unknown function 1 30041 30328
YP_009223119.1 NC_029068_p19 hypothetical protein singleton unknown function unknown function 1 16670 16816
YP_009223141.1 NC_029068_p41 DNA nuclease phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 28802 29143
YP_009223134.1 NC_029068_p34 hypothetical protein phrog_31015 unknown function unknown function 1 22999 23205
YP_009223125.1 NC_029068_p25 hypothetical protein phrog_38552 unknown function unknown function 1 19128 20360