Genomic map of Cronobacter phage Dev-CD-23823 (NC_029070)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029070
Definition
Cronobacter phage Dev-CD-23823 complete sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Melnykvirinae; Cronosvirus; Cronobacter virus DevCD23823.
DB of origin
REFSEQ
Length
41620
Host Name
Cronobacter
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
53.83
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009223412.1 NC_029070_p38 hypothetical protein phrog_5745 internal virion protein head and packaging 1 27186 27980
YP_009223395.1 NC_029070_p21 hypothetical protein phrog_862 unknown function unknown function 1 12176 12985
YP_009223376.1 NC_029070_p2 hypothetical protein phrog_1448 unknown function unknown function 1 1462 2058
YP_009223393.1 NC_029070_p19 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 8737 9648
YP_009223387.1 NC_029070_p13 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 5726 6061
YP_009223389.1 NC_029070_p15 hypothetical protein phrog_11140 unknown function unknown function 1 6329 6553
YP_009223410.1 NC_029070_p36 Tail tubular protein A phrog_446 tail protein tail 1 23951 24550
YP_009223408.1 NC_029070_p34 Scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 21942 22775
YP_009223409.1 NC_029070_p35 Major capsid protein phrog_267 major head protein head and packaging 1 22846 23877
YP_009223383.1 NC_029070_p9 hypothetical protein singleton unknown function unknown function 1 4021 4569
YP_009223402.1 NC_029070_p28 hypothetical protein phrog_1312 unknown function unknown function 1 16712 16828
YP_009223404.1 NC_029070_p30 hypothetical protein phrog_5112 unknown function unknown function 1 19369 19545
YP_009223416.1 NC_029070_p42 Type II holin phrog_920 holin lysis 1 36678 36869
YP_009223380.1 NC_029070_p6 hypothetical protein phrog_6379 unknown function unknown function 1 3337 3558
YP_009223375.1 NC_029070_p1 hypothetical protein phrog_9286 unknown function unknown function 1 567 932
YP_009223385.1 NC_029070_p11 hypothetical protein singleton unknown function unknown function 1 4943 5239
YP_009223407.1 NC_029070_p33 Head to tail connector phrog_449 head-tail adaptor connector 1 20401 21930
YP_009223378.1 NC_029070_p4 hypothetical protein phrog_2226 SAM-dependent methyltransferase other 1 2416 2820
YP_009223391.1 NC_029070_p17 DNA helicase, phage-associated phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 7282 8526
YP_009223406.1 NC_029070_p32 hypothetical protein phrog_6529 unknown function unknown function 1 19964 20386
YP_009223401.1 NC_029070_p27 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 16414 16725
YP_009223415.1 NC_029070_p41 Tail fiber protein phrog_6117 colanic acid degradation moron, auxiliary metabolic gene and host takeover 1 34085 36667
YP_009223420.1 NC_029070_p46 Phage endolysin phrog_7 endolysin lysis 1 40110 40658
YP_009223422.1 NC_029070_p48 hypothetical protein phrog_13582 unknown function unknown function 1 40998 41186
YP_009223396.1 NC_029070_p22 DNA exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 13003 13953
YP_009223384.1 NC_029070_p10 hypothetical protein singleton unknown function unknown function 1 4566 4943
YP_009223379.1 NC_029070_p5 hypothetical protein phrog_18383 unknown function unknown function 1 2823 3344
YP_009223382.1 NC_029070_p8 hypothetical protein phrog_5136 unknown function unknown function 1 3788 4009
YP_009223397.1 NC_029070_p23 hypothetical protein phrog_9561 unknown function unknown function 1 13953 14366
YP_009223392.1 NC_029070_p18 hypothetical protein singleton unknown function unknown function 1 8528 8737
YP_009223418.1 NC_029070_p44 DNA maturase B phrog_38 terminase large subunit head and packaging 1 37188 39131
YP_009223394.1 NC_029070_p20 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 9661 12126
YP_009223399.1 NC_029070_p25 hypothetical protein phrog_221 metallo-phosphoesterase other 1 14823 15860
YP_009223417.1 NC_029070_p43 hypothetical protein phrog_9441 terminase small subunit head and packaging 1 36853 37188
YP_009223386.1 NC_029070_p12 hypothetical protein phrog_9577 unknown function unknown function 1 5236 5619
YP_009223405.1 NC_029070_p31 hypothetical protein phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 19542 19964
YP_009223400.1 NC_029070_p26 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 16088 16417
YP_009223377.1 NC_029070_p3 hypothetical protein singleton unknown function unknown function 1 2058 2345
YP_009223388.1 NC_029070_p14 hypothetical protein phrog_5965 unknown function unknown function 1 6067 6324
YP_009223411.1 NC_029070_p37 Tail tubular protein B phrog_457 tail protein tail 1 24554 27184
YP_009223419.1 NC_029070_p45 hypothetical protein phrog_2973 Hoc-like head decoration head and packaging 1 39177 40076
YP_009223421.1 NC_029070_p47 hypothetical protein phrog_214 Rz-like spanin lysis 1 40655 41020
YP_009223413.1 NC_029070_p39 hypothetical protein phrog_3883 internal virion protein head and packaging 1 27990 30230
YP_009223381.1 NC_029070_p7 hypothetical protein phrog_7319 unknown function unknown function 1 3558 3719
YP_009223414.1 NC_029070_p40 Lytic glycosylase phrog_342 internal virion protein with endolysin domain head and packaging 1 30232 34014
YP_009223390.1 NC_029070_p16 DNA primase phrog_8634 DNA primase DNA, RNA and nucleotide metabolism 1 6611 7279
YP_009223398.1 NC_029070_p24 Phage endonuclease phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 14359 14823
YP_009223403.1 NC_029070_p29 Phage RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 16828 19281