Genomic map of Gordonia phage GordTnk2 (NC_029074)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029074
Definition
Gordonia phage GordTnk2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gordtnkvirus.
DB of origin
REFSEQ
Length
75987
Host Name
Gordonia sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
98
%GC
50.69
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009223956.1 NC_029074_p48 transcription factor WhiB phrog_472 WhiB transcriptional factor transcription regulation -1 43468 43692
YP_009224003.1 NC_029074_p95 hypothetical protein phrog_37971 unknown function unknown function -1 70115 70501
YP_009223983.1 NC_029074_p75 hypothetical protein phrog_22130 unknown function unknown function -1 56142 57011
YP_009223909.1 NC_029074_p1 hypothetical protein phrog_16015 terminase small subunit head and packaging 1 393 2012
YP_009223959.1 NC_029074_p51 hypothetical protein phrog_24706 unknown function unknown function -1 44570 44821
YP_009223952.1 NC_029074_p44 hypothetical protein phrog_10015 unknown function unknown function -1 42629 42811
YP_009223966.1 NC_029074_p58 ribonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 46942 47532
YP_009223924.1 NC_029074_p16 tape measure protein phrog_5448 tail length tape measure protein tail 1 14647 24465
YP_009223968.1 NC_029074_p60 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 47789 49330
YP_009223941.1 NC_029074_p33 lysin B phrog_102 endolysin lysis 1 37130 37915
YP_009223964.1 NC_029074_p56 DNA polymerase phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 45667 46803
YP_009223935.1 NC_029074_p27 holin phrog_565 holin lysis 1 34553 34999
YP_009223950.1 NC_029074_p42 thymidylate synthase ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 40609 41436
YP_009223917.1 NC_029074_p9 hypothetical protein phrog_195 head-tail adaptor connector 1 10652 11185
YP_009223967.1 NC_029074_p59 DNA binding protein phrog_10045 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 47535 47792
YP_009223970.1 NC_029074_p62 hypothetical protein phrog_23696 unknown function unknown function -1 49707 49940
YP_009223931.1 NC_029074_p23 hypothetical protein phrog_18568 unknown function unknown function 1 32879 33244
YP_009223962.1 NC_029074_p54 hypothetical protein phrog_20832 unknown function unknown function -1 45205 45357
YP_009223940.1 NC_029074_p32 hypothetical protein phrog_16963 unknown function unknown function 1 36804 37133
YP_009223996.1 NC_029074_p88 von Willebrand factor domain protein phrog_5298 cobalamin biosynthesis protein moron, auxiliary metabolic gene and host takeover -1 62182 64806
YP_009223944.1 NC_029074_p36 hypothetical protein phrog_24187 unknown function unknown function -1 38540 38824
YP_009223942.1 NC_029074_p34 hypothetical protein phrog_26139 unknown function unknown function -1 38018 38371
YP_009224004.1 NC_029074_p96 DNA primase phrog_5311 helicase DNA, RNA and nucleotide metabolism -1 72310 74328
YP_009223990.1 NC_029074_p82 hypothetical protein phrog_18600 DNA binding protein DNA, RNA and nucleotide metabolism -1 59265 59480
YP_009223916.1 NC_029074_p8 hypothetical protein phrog_15701 unknown function unknown function 1 10240 10530
YP_009223938.1 NC_029074_p30 holin phrog_1298 minor tail protein tail 1 35869 36360
YP_009223969.1 NC_029074_p61 hypothetical protein phrog_16754 unknown function unknown function -1 49349 49726
YP_009223913.1 NC_029074_p5 hypothetical protein phrog_976 head maturation protease head and packaging 1 7359 8525
YP_009223946.1 NC_029074_p38 hypothetical protein phrog_5351 HNH endonuclease DNA, RNA and nucleotide metabolism -1 39329 39655
YP_009223997.1 NC_029074_p89 ATPase phrog_5424 ATPase other -1 64928 66745
YP_009223927.1 NC_029074_p19 hypothetical protein phrog_26908 unknown function unknown function 1 28797 30644
YP_009223988.1 NC_029074_p80 hypothetical protein phrog_29301 unknown function unknown function -1 58634 58852
YP_009223920.1 NC_029074_p12 hypothetical protein phrog_18688 unknown function unknown function 1 12186 12491
YP_009223985.1 NC_029074_p77 hypothetical protein phrog_5406 unknown function unknown function -1 57521 58231
YP_009223979.1 NC_029074_p71 hypothetical protein phrog_12293 unknown function unknown function -1 54021 54371
YP_009223910.1 NC_029074_p2 TerL phrog_2 terminase large subunit head and packaging 1 2013 5048
YP_009223972.1 NC_029074_p64 hypothetical protein phrog_14234 unknown function unknown function -1 50710 51375
YP_009223947.1 NC_029074_p39 hypothetical protein phrog_7609 unknown function unknown function -1 39702 40127
YP_009223930.1 NC_029074_p22 lysin phrog_13480 endolysin lysis 1 32167 32868
YP_009223937.1 NC_029074_p29 hypothetical protein phrog_10223 DNA methyltransferase other 1 35663 35872
YP_009223922.1 NC_029074_p14 pre-TMP frameshift protein phrog_3096 tail assembly chaperone tail 1 13675 14540
YP_009223960.1 NC_029074_p52 hypothetical protein phrog_28446 unknown function unknown function -1 44799 45017
YP_009223984.1 NC_029074_p76 hypothetical protein phrog_23800 unknown function unknown function -1 57008 57394
YP_009223912.1 NC_029074_p4 hypothetical protein phrog_20049 unknown function unknown function 1 7110 7328
YP_009223923.1 NC_029074_p15 pre-TMP frameshift protein phrog_3096 tail assembly chaperone tail 1 13675 14280
YP_009223936.1 NC_029074_p28 methyltransferase phrog_363 DNA methyltransferase other 1 34999 35538
YP_009223963.1 NC_029074_p55 hypothetical protein phrog_2021 unknown function unknown function -1 45357 45665
YP_009223973.1 NC_029074_p65 hypothetical protein phrog_26509 unknown function unknown function -1 51531 51821
YP_009223951.1 NC_029074_p43 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 41442 42632
YP_009223929.1 NC_029074_p21 hypothetical protein phrog_240 head protein head and packaging 1 31707 32090
YP_009223965.1 NC_029074_p57 hypothetical protein phrog_36096 unknown function unknown function -1 46810 46932
YP_009223981.1 NC_029074_p73 hypothetical protein phrog_23870 unknown function unknown function -1 55306 55686
YP_009223957.1 NC_029074_p49 hypothetical protein phrog_14812 unknown function unknown function -1 43758 44006
YP_009223994.1 NC_029074_p86 hypothetical protein phrog_24469 unknown function unknown function -1 61431 61622
YP_009223921.1 NC_029074_p13 hypothetical protein phrog_290 minor tail protein tail 1 12503 13528
YP_009223919.1 NC_029074_p11 hypothetical protein phrog_5299 unknown function unknown function 1 11667 12170
YP_009223971.1 NC_029074_p63 DUF732-like protein phrog_16415 unknown function unknown function -1 49942 50397
YP_009223948.1 NC_029074_p40 hypothetical protein phrog_23689 unknown function unknown function -1 40120 40302
YP_009223949.1 NC_029074_p41 hypothetical protein phrog_22537 unknown function unknown function -1 40299 40661
YP_009223954.1 NC_029074_p46 hypothetical protein phrog_22017 unknown function unknown function -1 43048 43290
YP_009223943.1 NC_029074_p35 hypothetical protein phrog_22918 unknown function unknown function -1 38375 38530
YP_009224005.1 NC_029074_p97 hypothetical protein phrog_5558 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover -1 74332 74823
YP_009223914.1 NC_029074_p6 hypothetical protein phrog_5455 head decoration head and packaging 1 8540 9004
YP_009223987.1 NC_029074_p79 hypothetical protein phrog_34492 unknown function unknown function -1 58470 58637
YP_009223989.1 NC_029074_p81 hypothetical protein phrog_289 GTP-binding domain other -1 58816 59262
YP_009223945.1 NC_029074_p37 hypothetical protein phrog_3301 pyrophosphatase other -1 38826 39365
YP_009223980.1 NC_029074_p72 integrase phrog_1 integrase integration and excision -1 54372 55169
YP_009223977.1 NC_029074_p69 hypothetical protein phrog_17617 unknown function unknown function -1 53447 53731
YP_009223918.1 NC_029074_p10 morphogensis protein phrog_26 tail completion or Neck1 protein connector 1 11182 11670
YP_009223955.1 NC_029074_p47 hypothetical protein phrog_26737 unknown function unknown function -1 43290 43475
YP_009223932.1 NC_029074_p24 lysin A phrog_880 endolysin lysis 1 33244 33900
YP_009223961.1 NC_029074_p53 hypothetical protein phrog_30711 unknown function unknown function -1 45017 45208
YP_009224006.1 NC_029074_p98 hypothetical protein phrog_5362 DNA primase DNA, RNA and nucleotide metabolism -1 74850 75608
YP_009223928.1 NC_029074_p20 hypothetical protein phrog_25513 unknown function unknown function 1 30648 31685
YP_009224002.1 NC_029074_p94 hypothetical protein phrog_26956 unknown function unknown function -1 69819 70001
YP_009223911.1 NC_029074_p3 DUF935-like protein phrog_113 portal protein head and packaging 1 5183 7054
YP_009223992.1 NC_029074_p84 methyltransferase phrog_15480 methyltransferase other -1 59929 60687
YP_009223978.1 NC_029074_p70 hypothetical protein phrog_23729 unknown function unknown function -1 53732 54028
YP_009223933.1 NC_029074_p25 hypothetical protein phrog_22476 unknown function unknown function 1 33903 34169
YP_009223976.1 NC_029074_p68 hypothetical protein phrog_24125 unknown function unknown function -1 53124 53450
YP_009223999.1 NC_029074_p91 hypothetical protein phrog_15295 unknown function unknown function -1 67948 68841
YP_009223975.1 NC_029074_p67 hypothetical protein phrog_15020 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 52619 53131
YP_009223974.1 NC_029074_p66 hypothetical protein phrog_5686 unknown function unknown function -1 51823 52689
YP_009223998.1 NC_029074_p90 hypothetical protein phrog_25427 unknown function unknown function -1 67547 67792
YP_009223915.1 NC_029074_p7 major capsid protein phrog_29 major head protein head and packaging 1 9017 10207
YP_009223995.1 NC_029074_p87 hypothetical protein phrog_35867 unknown function unknown function -1 62000 62182
YP_009223934.1 NC_029074_p26 hypothetical protein phrog_18341 peptidase other 1 34174 34542
YP_009223993.1 NC_029074_p85 hypothetical protein phrog_20135 unknown function unknown function -1 60684 61304
YP_009223986.1 NC_029074_p78 hypothetical protein phrog_16893 unknown function unknown function -1 58231 58473
YP_009223982.1 NC_029074_p74 hypothetical protein phrog_27660 unknown function unknown function -1 55683 56012
YP_009223991.1 NC_029074_p83 hypothetical protein phrog_23057 unknown function unknown function -1 59486 59926
YP_009223958.1 NC_029074_p50 RusA-like ribonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 44019 44573
YP_009223926.1 NC_029074_p18 hypothetical protein phrog_1887 tail protein tail 1 27067 28800
YP_009223953.1 NC_029074_p45 hypothetical protein phrog_26821 unknown function unknown function -1 42884 43048
YP_009224001.1 NC_029074_p93 hypothetical protein phrog_15017 unknown function unknown function -1 69440 69694
YP_009223939.1 NC_029074_p31 holin phrog_726 unknown function unknown function 1 36363 36761
YP_009224000.1 NC_029074_p92 hypothetical protein phrog_24480 unknown function unknown function -1 69229 69420
YP_009223925.1 NC_029074_p17 hypothetical protein phrog_5287 minor tail protein tail 1 24468 27047