| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_029075 |
Definition |
Achromobacter phage JWF, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
81541 |
Host Name |
Achromobacter xylosoxidans |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
118 |
%GC |
60.13 |
Number of singletons |
69 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009224122.1 | NC_029075_p116 | hypothetical protein | singleton | unknown function | unknown function | -1 | 78617 | 79093 |
| YP_009224022.1 | NC_029075_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15253 | 15735 |
| YP_009224032.1 | NC_029075_p26 | hypothetical protein | phrog_31 | central tail fiber J | tail | 1 | 25378 | 28968 |
| YP_009224109.1 | NC_029075_p103 | hypothetical protein | phrog_20892 | unknown function | unknown function | -1 | 74179 | 74532 |
| YP_009224014.1 | NC_029075_p8 | hypothetical protein | phrog_3753 | portal protein | head and packaging | 1 | 8106 | 9620 |
| YP_009224018.1 | NC_029075_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12601 | 13239 |
| YP_009224098.1 | NC_029075_p92 | hypothetical protein | singleton | unknown function | unknown function | -1 | 70021 | 70203 |
| YP_009224077.1 | NC_029075_p71 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61626 | 62000 |
| YP_009224041.1 | NC_029075_p35 | hypothetical protein | phrog_2466 | Rz-like spanin | lysis | 1 | 34980 | 35546 |
| YP_009224120.1 | NC_029075_p114 | hypothetical protein | singleton | unknown function | unknown function | -1 | 77883 | 78074 |
| YP_009224110.1 | NC_029075_p104 | hypothetical protein | singleton | unknown function | unknown function | -1 | 74532 | 75005 |
| YP_009224015.1 | NC_029075_p9 | hypothetical protein | phrog_37797 | unknown function | unknown function | 1 | 9700 | 10848 |
| YP_009224012.1 | NC_029075_p6 | hypothetical protein | phrog_30421 | unknown function | unknown function | -1 | 5613 | 6155 |
| YP_009224042.1 | NC_029075_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35556 | 36176 |
| YP_009224121.1 | NC_029075_p115 | hypothetical protein | singleton | unknown function | unknown function | -1 | 78084 | 78587 |
| YP_009224053.1 | NC_029075_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46409 | 46711 |
| YP_009224101.1 | NC_029075_p95 | hypothetical protein | singleton | unknown function | unknown function | -1 | 71207 | 71554 |
| YP_009224008.1 | NC_029075_p2 | hypothetical protein | phrog_33934 | unknown function | unknown function | -1 | 590 | 1291 |
| YP_009224124.1 | NC_029075_p118 | hypothetical protein | phrog_33934 | unknown function | unknown function | -1 | 80665 | 81366 |
| YP_009224054.1 | NC_029075_p48 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46714 | 46944 |
| YP_009224105.1 | NC_029075_p99 | hypothetical protein | singleton | unknown function | unknown function | -1 | 73319 | 73582 |
| YP_009224024.1 | NC_029075_p18 | hypothetical protein | phrog_28493 | unknown function | unknown function | 1 | 16008 | 16808 |
| YP_009224045.1 | NC_029075_p39 | deoxynucleoside monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 39277 | 39900 |
| YP_009224102.1 | NC_029075_p96 | hypothetical protein | singleton | unknown function | unknown function | -1 | 71557 | 72531 |
| YP_009224025.1 | NC_029075_p19 | hypothetical protein | phrog_37198 | tail length tape measure protein chaperone | tail | 1 | 16895 | 17347 |
| YP_009224057.1 | NC_029075_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 48462 | 48743 |
| YP_009224028.1 | NC_029075_p22 | minor tail protein L | phrog_18 | minor tail protein | tail | 1 | 23491 | 23988 |
| YP_009224080.1 | NC_029075_p74 | hypothetical protein | singleton | unknown function | unknown function | -1 | 62756 | 62926 |
| YP_009224104.1 | NC_029075_p98 | hypothetical protein | singleton | unknown function | unknown function | -1 | 73138 | 73314 |
| YP_009224048.1 | NC_029075_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41889 | 42233 |
| YP_009224030.1 | NC_029075_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24477 | 24803 |
| YP_009224058.1 | NC_029075_p52 | hypothetical protein | phrog_9572 | sulfatase-modifying factor enzyme | other | -1 | 48745 | 48984 |
| YP_009224016.1 | NC_029075_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10901 | 11299 |
| YP_009224074.1 | NC_029075_p68 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60358 | 60783 |
| YP_009224112.1 | NC_029075_p106 | hypothetical protein | singleton | unknown function | unknown function | -1 | 75200 | 75655 |
| YP_009224123.1 | NC_029075_p117 | hypothetical protein | phrog_34248 | unknown function | unknown function | -1 | 80137 | 80451 |
| YP_009224097.1 | NC_029075_p91 | hypothetical protein | singleton | unknown function | unknown function | -1 | 69738 | 70016 |
| YP_009224083.1 | NC_029075_p77 | hypothetical protein | singleton | unknown function | unknown function | -1 | 63321 | 63728 |
| YP_009224067.1 | NC_029075_p61 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55143 | 55850 |
| YP_009224034.1 | NC_029075_p28 | Hom_end-associated Hint family protein | singleton | unknown function | unknown function | 1 | 29502 | 30953 |
| YP_009224117.1 | NC_029075_p111 | hypothetical protein | singleton | unknown function | unknown function | -1 | 76935 | 77231 |
| YP_009224055.1 | NC_029075_p49 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 46953 | 48299 |
| YP_009224072.1 | NC_029075_p66 | hypothetical protein | singleton | unknown function | unknown function | -1 | 59647 | 60039 |
| YP_009224066.1 | NC_029075_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 54682 | 54882 |
| YP_009224119.1 | NC_029075_p113 | hypothetical protein | phrog_14450 | unknown function | unknown function | -1 | 77584 | 77883 |
| YP_009224020.1 | NC_029075_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13971 | 14495 |
| YP_009224111.1 | NC_029075_p105 | hypothetical protein | singleton | unknown function | unknown function | -1 | 75041 | 75196 |
| YP_009224068.1 | NC_029075_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55950 | 56348 |
| YP_009224090.1 | NC_029075_p84 | hypothetical protein | singleton | unknown function | unknown function | -1 | 67664 | 67831 |
| YP_009224088.1 | NC_029075_p82 | hypothetical protein | phrog_2355 | unknown function | unknown function | -1 | 66411 | 66839 |
| YP_009224043.1 | NC_029075_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36181 | 37794 |
| YP_009224118.1 | NC_029075_p112 | hypothetical protein | singleton | unknown function | unknown function | -1 | 77234 | 77563 |
| YP_009224064.1 | NC_029075_p58 | hypothetical protein | singleton | unknown function | unknown function | -1 | 53683 | 53898 |
| YP_009224031.1 | NC_029075_p25 | tail component protein | phrog_32 | tail assembly protein | tail | 1 | 24769 | 25377 |
| YP_009224106.1 | NC_029075_p100 | hypothetical protein | singleton | unknown function | unknown function | -1 | 73586 | 73771 |
| YP_009224052.1 | NC_029075_p46 | holliday junction-specific endonuclease | phrog_843 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 45888 | 46334 |
| YP_009224017.1 | NC_029075_p11 | hypothetical protein | phrog_3922 | major head protein | head and packaging | 1 | 11346 | 12524 |
| YP_009224079.1 | NC_029075_p73 | hypothetical protein | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 62187 | 62753 |
| YP_009224060.1 | NC_029075_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 49602 | 50270 |
| YP_009224029.1 | NC_029075_p23 | NlpC/P60 family protein | phrog_2552 | unknown function | unknown function | 1 | 23972 | 24520 |
| YP_009224113.1 | NC_029075_p107 | hypothetical protein | singleton | unknown function | unknown function | -1 | 75660 | 75851 |
| YP_009224093.1 | NC_029075_p87 | hypothetical protein | singleton | unknown function | unknown function | -1 | 68521 | 68970 |
| YP_009224081.1 | NC_029075_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 62930 | 63091 |
| YP_009224108.1 | NC_029075_p102 | hypothetical protein | singleton | unknown function | unknown function | -1 | 74057 | 74176 |
| YP_009224050.1 | NC_029075_p44 | endonuclease subunit | phrog_100 | SbcD-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 44232 | 45242 |
| YP_009224019.1 | NC_029075_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13249 | 13974 |
| YP_009224065.1 | NC_029075_p59 | DNA polymerase I thermostable | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 53895 | 54677 |
| YP_009224021.1 | NC_029075_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14492 | 15256 |
| YP_009224046.1 | NC_029075_p40 | hypothetical protein | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 39893 | 41215 |
| YP_009224039.1 | NC_029075_p33 | hypothetical protein | phrog_20672 | unknown function | unknown function | 1 | 34179 | 34589 |
| YP_009224085.1 | NC_029075_p79 | hypothetical protein | singleton | unknown function | unknown function | -1 | 64746 | 65261 |
| YP_009224013.1 | NC_029075_p7 | terminase large subunit | phrog_675 | terminase large subunit | head and packaging | 1 | 6356 | 8137 |
| YP_009224040.1 | NC_029075_p34 | hypothetical protein | phrog_6384 | holin | lysis | 1 | 34594 | 34983 |
| YP_009224073.1 | NC_029075_p67 | hypothetical protein | phrog_3292 | unknown function | unknown function | -1 | 60045 | 60278 |
| YP_009224095.1 | NC_029075_p89 | hypothetical protein | singleton | unknown function | unknown function | -1 | 69287 | 69529 |
| YP_009224100.1 | NC_029075_p94 | hypothetical protein | singleton | unknown function | unknown function | -1 | 70483 | 71187 |
| YP_009224087.1 | NC_029075_p81 | hypothetical protein | singleton | unknown function | unknown function | -1 | 66020 | 66250 |
| YP_009224033.1 | NC_029075_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28968 | 29441 |
| YP_009224036.1 | NC_029075_p30 | anaerobic sulfatase-maturating enzyme | phrog_1802 | radical SAM domain-containing protein | other | 1 | 31659 | 33023 |
| YP_009224056.1 | NC_029075_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 48302 | 48493 |
| YP_009224049.1 | NC_029075_p43 | chromosome segregation protein | phrog_77 | SbcC-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 42230 | 44242 |
| YP_009224094.1 | NC_029075_p88 | hypothetical protein | phrog_4068 | unknown function | unknown function | -1 | 69015 | 69290 |
| YP_009224084.1 | NC_029075_p78 | hypothetical protein | phrog_6247 | DNA topoisomerase | DNA, RNA and nucleotide metabolism | -1 | 63706 | 64668 |
| YP_009224038.1 | NC_029075_p32 | chitinase | phrog_181 | endolysin | lysis | 1 | 33640 | 34179 |
| YP_009224089.1 | NC_029075_p83 | hypothetical protein | phrog_27363 | unknown function | unknown function | -1 | 66829 | 67629 |
| YP_009224086.1 | NC_029075_p80 | hypothetical protein | singleton | unknown function | unknown function | -1 | 65337 | 66017 |
| YP_009224099.1 | NC_029075_p93 | hypothetical protein | singleton | unknown function | unknown function | -1 | 70216 | 70479 |
| YP_009224103.1 | NC_029075_p97 | hypothetical protein | singleton | unknown function | unknown function | -1 | 72567 | 73145 |
| YP_009224044.1 | NC_029075_p38 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37835 | 39127 |
| YP_009224075.1 | NC_029075_p69 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60913 | 61320 |
| YP_009224010.1 | NC_029075_p4 | endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2490 | 3080 |
| YP_009224035.1 | NC_029075_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30940 | 31662 |
| YP_009224026.1 | NC_029075_p20 | lysin | phrog_37649 | tail length tape measure protein | tail | 1 | 17616 | 23099 |
| YP_009224007.1 | NC_029075_p1 | hypothetical protein | phrog_34248 | unknown function | unknown function | -1 | 62 | 376 |
| YP_009224062.1 | NC_029075_p56 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 50491 | 53223 |
| YP_009224096.1 | NC_029075_p90 | hypothetical protein | singleton | unknown function | unknown function | -1 | 69565 | 69741 |
| YP_009224091.1 | NC_029075_p85 | hypothetical protein | singleton | unknown function | unknown function | -1 | 67831 | 68214 |
| YP_009224082.1 | NC_029075_p76 | hypothetical protein | phrog_5643 | unknown function | unknown function | -1 | 63094 | 63324 |
| YP_009224115.1 | NC_029075_p109 | hypothetical protein | singleton | unknown function | unknown function | -1 | 76467 | 76712 |
| YP_009224076.1 | NC_029075_p70 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61348 | 61629 |
| YP_009224027.1 | NC_029075_p21 | hypothetical protein | phrog_34212 | unknown function | unknown function | 1 | 23099 | 23494 |
| YP_009224023.1 | NC_029075_p17 | Arc-like DNA binding domain protein | singleton | unknown function | unknown function | -1 | 15716 | 15916 |
| YP_009224063.1 | NC_029075_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 53239 | 53679 |
| YP_009224037.1 | NC_029075_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33023 | 33424 |
| YP_009224051.1 | NC_029075_p45 | exonuclease | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 45307 | 45891 |
| YP_009224107.1 | NC_029075_p101 | hypothetical protein | singleton | unknown function | unknown function | -1 | 73768 | 73965 |
| YP_009224071.1 | NC_029075_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 58946 | 59650 |
| YP_009224011.1 | NC_029075_p5 | hypothetical protein | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 3093 | 5609 |
| YP_009224009.1 | NC_029075_p3 | endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1669 | 2316 |
| YP_009224078.1 | NC_029075_p72 | hypothetical protein | singleton | unknown function | unknown function | -1 | 62003 | 62194 |
| YP_009224069.1 | NC_029075_p63 | hypothetical protein | phrog_25727 | unknown function | unknown function | -1 | 56358 | 57494 |
| YP_009224092.1 | NC_029075_p86 | hypothetical protein | singleton | unknown function | unknown function | -1 | 68211 | 68537 |
| YP_009224061.1 | NC_029075_p55 | hypothetical protein | singleton | unknown function | unknown function | -1 | 50267 | 50494 |
| YP_009224070.1 | NC_029075_p64 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 57491 | 58942 |
| YP_009224116.1 | NC_029075_p110 | hypothetical protein | phrog_38643 | unknown function | unknown function | -1 | 76716 | 76925 |
| YP_009224047.1 | NC_029075_p41 | hypothetical protein | phrog_229 | MazG-like pyrophosphatase | other | -1 | 41275 | 41889 |
| YP_009224114.1 | NC_029075_p108 | hypothetical protein | singleton | unknown function | unknown function | -1 | 75854 | 76267 |
| YP_009224059.1 | NC_029075_p53 | hypothetical protein | phrog_318 | deoxyribonucleoside 5' monophosphate phosphatase | other | -1 | 48995 | 49618 |