Genomic map of Pectobacterium phage Peat1 (NC_029081)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029081
Definition
Pectobacterium phage Peat1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Corkvirinae; Phimunavirus; Pectobacterium virus Peat1.
DB of origin
REFSEQ
Length
45633
Host Name
Pectobacterium atrosepticum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
48.86
Number of singletons
12
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009224683.1 NC_029081_p52 hypothetical protein phrog_17528 unknown function unknown function 1 39321 39509
YP_009224641.1 NC_029081_p10 hypothetical protein phrog_4317 unknown function unknown function 1 4903 5337
YP_009224657.1 NC_029081_p26 hypothetical protein phrog_21729 unknown function unknown function 1 14695 14916
YP_009224674.1 NC_029081_p43 hypothetical protein phrog_457 tail protein tail 1 25658 27988
YP_009224675.1 NC_029081_p44 internal virion protein A phrog_4295 internal virion protein head and packaging 1 27985 28599
YP_009224684.1 NC_029081_p53 type VII integral membrane protein phrog_9732 unknown function unknown function 1 39520 40059
YP_009224651.1 NC_029081_p20 hypothetical protein phrog_15093 unknown function unknown function 1 9255 9437
YP_009224660.1 NC_029081_p29 hypothetical protein phrog_16324 unknown function unknown function 1 16427 16609
YP_009224672.1 NC_029081_p41 tail tubular protein A singleton unknown function unknown function 1 24865 25017
YP_009224636.1 NC_029081_p5 hypothetical protein phrog_5136 unknown function unknown function 1 1505 1681
YP_009224663.1 NC_029081_p32 hypothetical protein phrog_5167 unknown function unknown function 1 19325 19741
YP_009224638.1 NC_029081_p7 hypothetical protein phrog_6167 unknown function unknown function 1 1854 2198
YP_009224687.1 NC_029081_p56 lysozyme-like domain phrog_7 endolysin lysis 1 40701 41306
YP_009224681.1 NC_029081_p50 hypothetical protein phrog_891 terminase small subunit head and packaging 1 37199 37486
YP_009224633.1 NC_029081_p2 cytochrome c biogenesis protein phrog_30627 unknown function unknown function 1 580 843
YP_009224647.1 NC_029081_p16 hypothetical protein singleton unknown function unknown function 1 7077 7265
YP_009224640.1 NC_029081_p9 Zn-peptidase phrog_4191 peptidase other 1 3945 4916
YP_009224670.1 NC_029081_p39 capsid protein singleton unknown function unknown function 1 23900 24331
YP_009224679.1 NC_029081_p48 tail fiber protein phrog_11393 tail fiber protein tail 1 35288 36892
YP_009224691.1 NC_029081_p60 hypothetical protein phrog_16905 unknown function unknown function 1 44960 45157
YP_009224642.1 NC_029081_p11 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5330 5767
YP_009224650.1 NC_029081_p19 hypothetical protein phrog_25669 unknown function unknown function 1 8963 9262
YP_009224692.1 NC_029081_p61 hypothetical protein phrog_6352 unknown function unknown function 1 45154 45345
YP_009224639.1 NC_029081_p8 hypothetical protein phrog_13313 unknown function unknown function 1 2216 3955
YP_009224664.1 NC_029081_p33 structural protein phrog_3112 virion structural protein head and packaging 1 19734 20060
YP_009224655.1 NC_029081_p24 hypothetical protein phrog_38674 unknown function unknown function 1 13844 13966
YP_009224671.1 NC_029081_p40 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 24391 24855
YP_009224676.1 NC_029081_p45 ImpA domain protein phrog_2083 internal virion lysozyme motif head and packaging 1 28609 31323
YP_009224653.1 NC_029081_p22 hypothetical protein phrog_862 unknown function unknown function 1 11852 12688
YP_009224668.1 NC_029081_p37 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 22039 23133
YP_009224689.1 NC_029081_p58 hypothetical protein singleton unknown function unknown function 1 43517 44116
YP_009224645.1 NC_029081_p14 hypothetical protein singleton unknown function unknown function 1 6748 6957
YP_009224667.1 NC_029081_p36 hypothetical protein singleton unknown function unknown function 1 21792 22046
YP_009224669.1 NC_029081_p38 capsid protein phrog_267 major head protein head and packaging 1 23151 23930
YP_009224682.1 NC_029081_p51 hypothetical protein phrog_38 terminase large subunit head and packaging 1 37495 39312
YP_009224659.1 NC_029081_p28 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 15993 16316
YP_009224680.1 NC_029081_p49 hypothetical protein singleton unknown function unknown function 1 36901 37158
YP_009224643.1 NC_029081_p12 topisomerase-primase domain phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 5764 6609
YP_009224688.1 NC_029081_p57 tail protein phrog_1819 tail spike protein tail 1 41321 43081
YP_009224649.1 NC_029081_p18 endonuclease phrog_22533 endonuclease DNA, RNA and nucleotide metabolism 1 8743 8970
YP_009224632.1 NC_029081_p1 hypothetical protein phrog_5277 unknown function unknown function 1 90 515
YP_009224644.1 NC_029081_p13 DnaG-like primase singleton unknown function unknown function 1 6581 6781
YP_009224677.1 NC_029081_p46 internal core protein singleton unknown function unknown function 1 31333 32454
YP_009224654.1 NC_029081_p23 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 12787 13842
YP_009224648.1 NC_029081_p17 P-loop NTPase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 7365 8528
YP_009224678.1 NC_029081_p47 internal core protein phrog_342 internal virion protein with endolysin domain head and packaging 1 32459 35278
YP_009224662.1 NC_029081_p31 hypothetical protein phrog_5394 unknown function unknown function 1 19153 19350
YP_009224652.1 NC_029081_p21 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 9491 11833
YP_009224673.1 NC_029081_p42 tail tubular protein A phrog_446 tail protein tail 1 25091 25648
YP_009224661.1 NC_029081_p30 DNA-dependent RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 16616 19060
YP_009224646.1 NC_029081_p15 hypothetical protein phrog_20064 unknown function unknown function 1 6932 7087
YP_009224637.1 NC_029081_p6 hypothetical protein phrog_32621 unknown function unknown function 1 1678 1857
YP_009224665.1 NC_029081_p34 head to tail connecting protein phrog_449 head-tail adaptor connector 1 20063 21421
YP_009224634.1 NC_029081_p3 hypothetical protein singleton unknown function unknown function 1 920 1078
YP_009224685.1 NC_029081_p54 serine protease phrog_1804 Rz-like spanin lysis 1 40069 40458
YP_009224658.1 NC_029081_p27 calcineurin-like phosphoesterase phrog_221 metallo-phosphoesterase other 1 14909 15883
YP_009224666.1 NC_029081_p35 head to tail connecting protein phrog_22998 head-tail connector protein connector 1 21418 21792
YP_009224635.1 NC_029081_p4 hypothetical protein phrog_29728 unknown function unknown function 1 1066 1392
YP_009224690.1 NC_029081_p59 GIY-YIG nuclease domain singleton unknown function unknown function 1 44137 44424
YP_009224656.1 NC_029081_p25 recombination endonuclease VII provisional singleton unknown function unknown function 1 14481 14714
YP_009224686.1 NC_029081_p55 hypothetical protein phrog_20 holin lysis 1 40448 40717