Genomic map of Paenibacillus phage Rani (NC_029084)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029084
Definition
Bacteriophage Rani, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sitaravirus.
DB of origin
REFSEQ
Length
37990
Host Name
Paenibacillus larvae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
41.77
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009224887.1 NC_029084_p21 N-acetylmuramoyl-L-alanine amidase-like protein phrog_3088 amidase lysis 1 14202 14876
YP_009224885.1 NC_029084_p19 hypothetical protein phrog_134 unknown function unknown function 1 13824 13985
YP_009224926.1 NC_029084_p60 transglycosylase-like protein phrog_1315 unknown function unknown function 1 37335 37601
YP_009224910.1 NC_029084_p44 RecT-like protein phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 27543 28457
YP_009224904.1 NC_029084_p38 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 24066 24824
YP_009224876.1 NC_029084_p10 tail protein phrog_176 tail terminator connector 1 6285 6680
YP_009224908.1 NC_029084_p42 ATPase phrog_1499 unknown function unknown function 1 25817 27346
YP_009224916.1 NC_029084_p50 DNA-cytosine methyltransferase phrog_363 DNA methyltransferase other 1 31973 33043
YP_009224889.1 NC_029084_p23 hypothetical protein phrog_24359 unknown function unknown function -1 15371 15613
YP_009224896.1 NC_029084_p30 DNA-binding protein phrog_18248 transcriptional regulator transcription regulation -1 20256 21050
YP_009224890.1 NC_029084_p24 hypothetical protein phrog_26129 unknown function unknown function -1 15688 16482
YP_009224882.1 NC_029084_p16 hypothetical protein phrog_538 minor tail protein tail 1 11282 12400
YP_009224895.1 NC_029084_p29 integrase phrog_1 integrase integration and excision -1 18986 20209
YP_009224906.1 NC_029084_p40 hypothetical protein phrog_8406 unknown function unknown function 1 25290 25538
YP_009224893.1 NC_029084_p27 hypothetical protein phrog_19875 unknown function unknown function -1 17849 18127
YP_009224875.1 NC_029084_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5873 6301
YP_009224915.1 NC_029084_p49 hypothetical protein phrog_6868 unknown function unknown function 1 31675 31980
YP_009224873.1 NC_029084_p7 head-tail connector phrog_40 head-tail adaptor Ad1 connector 1 5296 5559
YP_009224868.1 NC_029084_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 345 2069
YP_009224919.1 NC_029084_p53 hypothetical protein phrog_98 unknown function unknown function 1 33452 33835
YP_009224870.1 NC_029084_p4 Clp protease-like protein phrog_94 head maturation protease head and packaging 1 3309 4025
YP_009224884.1 NC_029084_p18 hypothetical protein phrog_6220 unknown function unknown function 1 13489 13824
YP_009224891.1 NC_029084_p25 hypothetical protein phrog_24293 unknown function unknown function 1 16654 16890
YP_009224899.1 NC_029084_p33 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 22277 22516
YP_009224867.1 NC_029084_p1 terminase small subunit phrog_361 terminase small subunit head and packaging 1 50 364
YP_009224880.1 NC_029084_p14 tail tape measure phrog_58 tail length tape measure protein tail 1 7795 10431
YP_009224909.1 NC_029084_p43 hypothetical protein phrog_5189 unknown function unknown function 1 27343 27540
YP_009224918.1 NC_029084_p52 MazG-like nucleotide pyrophosphohydrolase protein phrog_715 MazG-like pyrophosphatase other 1 33040 33345
YP_009224922.1 NC_029084_p56 hypothetical protein phrog_5494 unknown function unknown function 1 34756 35214
YP_009224878.1 NC_029084_p12 hypothetical protein phrog_7902 unknown function unknown function 1 7116 7454
YP_009224881.1 NC_029084_p15 tail protein phrog_33 distal tail protein Dit tail 1 10428 11279
YP_009224872.1 NC_029084_p6 hypothetical protein phrog_6793 unknown function unknown function 1 5130 5303
YP_009224903.1 NC_029084_p37 hypothetical protein phrog_9497 unknown function unknown function 1 23776 24039
YP_009224913.1 NC_029084_p47 primosome component-like protein phrog_2514 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 29554 30384
YP_009224920.1 NC_029084_p54 hypothetical protein phrog_6998 unknown function unknown function 1 33828 34043
YP_009224898.1 NC_029084_p32 DNA-binding protein phrog_63 anti-repressor Ant transcription regulation 1 21508 22248
YP_009224914.1 NC_029084_p48 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 30344 31672
YP_009224900.1 NC_029084_p34 Rha type regulatory protein phrog_373 anti-repressor transcription regulation 1 22513 23253
YP_009224923.1 NC_029084_p57 ArpU-like transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 35265 35705
YP_009224905.1 NC_029084_p39 hypothetical protein phrog_12825 unknown function unknown function 1 24821 25300
YP_009224912.1 NC_029084_p46 hypothetical protein phrog_7503 unknown function unknown function 1 29225 29539
YP_009224888.1 NC_029084_p22 holin-like protein phrog_1299 holin lysis 1 14886 15128
YP_009224869.1 NC_029084_p3 portal protein phrog_12 portal protein head and packaging 1 2084 3319
YP_009224877.1 NC_029084_p11 major tail protein phrog_1407 major tail protein tail 1 6682 7119
YP_009224901.1 NC_029084_p35 hypothetical protein phrog_12765 unknown function unknown function 1 23280 23498
YP_009224911.1 NC_029084_p45 beta-lactamase-like protein phrog_392 metal-dependent hydrolase other 1 28470 29228
YP_009224924.1 NC_029084_p58 hypothetical protein phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 35845 36267
YP_009224883.1 NC_029084_p17 tail protein phrog_5339 virion structural protein head and packaging 1 12406 13479
YP_009224927.1 NC_029084_p61 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 37598 37936
YP_009224871.1 NC_029084_p5 major capsid protein phrog_10 major head protein head and packaging 1 4022 5152
YP_009224907.1 NC_029084_p41 hypothetical protein phrog_8288 unknown function unknown function 1 25543 25833
YP_009224874.1 NC_029084_p8 head-tail adaptor phrog_25 head closure Hc1 connector 1 5556 5873
YP_009224886.1 NC_029084_p20 bacteriocin-like protein phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 13966 14205
YP_009224879.1 NC_029084_p13 hypothetical protein phrog_7848 unknown function unknown function 1 7481 7735
YP_009224921.1 NC_029084_p55 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34007 34597
YP_009224925.1 NC_029084_p59 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 36329 36544
YP_009224897.1 NC_029084_p31 DNA-binding protein phrog_1468 transcriptional repressor transcription regulation 1 21314 21511
YP_009224902.1 NC_029084_p36 hypothetical protein phrog_12380 unknown function unknown function 1 23543 23770
YP_009224892.1 NC_029084_p26 hypothetical protein phrog_806 unknown function unknown function -1 17201 17752
YP_009224917.1 NC_029084_p51 hypothetical protein phrog_1008 DNA methyltransferase other 1 32175 32879
YP_009224894.1 NC_029084_p28 anti-repressor like protein phrog_17477 anti-repressor transcription regulation 1 18231 18674