Genomic map of Mycobacterium phage Mindy (NC_029093)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029093
Definition
Mycobacterium phage Mindy, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
REFSEQ
Length
75796
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
147
%GC
62.96
Number of singletons
0
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009225360.1 NC_029093_p73 hypothetical protein phrog_1622 unknown function unknown function 1 46760 46933
YP_009225374.1 NC_029093_p87 polynucleotide kinase phrog_505 polynucleotide kinase other 1 52012 52953
YP_009225424.1 NC_029093_p137 hypothetical protein phrog_3730 unknown function unknown function -1 72203 72328
YP_009225307.1 NC_029093_p20 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 12248 12709
YP_009225300.1 NC_029093_p13 major capsid protein phrog_10 major head protein head and packaging 1 7705 9198
YP_009225325.1 NC_029093_p38 hypothetical protein phrog_27547 unknown function unknown function -1 33198 33317
YP_009225294.1 NC_029093_p7 hypothetical protein phrog_2142 unknown function unknown function 1 1382 1726
YP_009225428.1 NC_029093_p141 hypothetical protein phrog_7581 unknown function unknown function -1 73521 73730
YP_009225421.1 NC_029093_p134 hypothetical protein phrog_1587 unknown function unknown function -1 71014 71343
YP_009225426.1 NC_029093_p139 hypothetical protein phrog_2883 unknown function unknown function -1 72570 73058
YP_009225379.1 NC_029093_p92 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 55700 55960
YP_009225372.1 NC_029093_p85 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 51283 51666
YP_009225315.1 NC_029093_p28 minor tail protein phrog_553 minor tail protein tail 1 27302 28246
YP_009225317.1 NC_029093_p30 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 28752 28928
YP_009225370.1 NC_029093_p83 hypothetical protein phrog_2747 unknown function unknown function 1 50767 50988
YP_009225382.1 NC_029093_p95 hypothetical protein phrog_889 unknown function unknown function 1 56588 57031
YP_009225301.1 NC_029093_p14 head-to-tail connector phrog_2796 head-tail connector protein connector 1 9266 9457
YP_009225339.1 NC_029093_p52 hypothetical protein phrog_2842 unknown function unknown function 1 37991 38230
YP_009225335.1 NC_029093_p48 hypothetical protein phrog_2815 unknown function unknown function -1 35590 35736
YP_009225404.1 NC_029093_p117 hypothetical protein phrog_2965 unknown function unknown function 1 66620 66757
YP_009225316.1 NC_029093_p29 hypothetical protein phrog_644 unknown function unknown function 1 28327 28755
YP_009225412.1 NC_029093_p125 hypothetical protein phrog_2925 unknown function unknown function 1 68246 68425
YP_009225293.1 NC_029093_p6 terminase small subunit phrog_83 terminase small subunit head and packaging 1 997 1389
YP_009225290.1 NC_029093_p3 hypothetical protein phrog_2829 unknown function unknown function 1 446 604
YP_009225396.1 NC_029093_p109 hypothetical protein phrog_4826 unknown function unknown function 1 63277 63594
YP_009225355.1 NC_029093_p68 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44522 45244
YP_009225304.1 NC_029093_p17 head-to-tail connector phrog_2805 minor tail protein tail 1 10368 10748
YP_009225324.1 NC_029093_p37 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 32913 33158
YP_009225384.1 NC_029093_p97 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 57365 57907
YP_009225394.1 NC_029093_p107 hypothetical protein phrog_1042 unknown function unknown function 1 62629 62892
YP_009225343.1 NC_029093_p56 hypothetical protein phrog_2852 unknown function unknown function 1 39828 39965
YP_009225405.1 NC_029093_p118 hypothetical protein phrog_2755 unknown function unknown function 1 66744 66917
YP_009225352.1 NC_029093_p65 hypothetical protein phrog_762 unknown function unknown function 1 42828 43157
YP_009225419.1 NC_029093_p132 hypothetical protein phrog_3034 unknown function unknown function -1 70170 70538
YP_009225296.1 NC_029093_p9 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2174 4837
YP_009225338.1 NC_029093_p51 integrase phrog_1 integrase integration and excision 1 36971 37852
YP_009225295.1 NC_029093_p8 hypothetical protein phrog_2202 unknown function unknown function -1 1827 2138
YP_009225306.1 NC_029093_p19 major tail subunit phrog_476 major tail protein tail 1 11157 12128
YP_009225433.1 NC_029093_p146 hypothetical protein phrog_2904 unknown function unknown function 1 74582 74929
YP_009225328.1 NC_029093_p41 hypothetical protein phrog_30616 unknown function unknown function -1 33894 34136
YP_009225402.1 NC_029093_p115 hypothetical protein phrog_1941 unknown function unknown function 1 65411 65653
YP_009225308.1 NC_029093_p21 tail assembly chaperone phrog_5940 tail assembly chaperone tail 1 12841 13119
YP_009225347.1 NC_029093_p60 hypothetical protein phrog_4633 unknown function unknown function 1 41539 41727
YP_009225383.1 NC_029093_p96 hypothetical protein phrog_2788 unknown function unknown function 1 57033 57368
YP_009225320.1 NC_029093_p33 holin phrog_526 holin lysis 1 30925 31308
YP_009225431.1 NC_029093_p144 hypothetical protein phrog_2795 unknown function unknown function -1 74146 74349
YP_009225373.1 NC_029093_p86 hypothetical protein phrog_2894 unknown function unknown function 1 51663 51857
YP_009225381.1 NC_029093_p94 hypothetical protein phrog_889 unknown function unknown function 1 56132 56584
YP_009225389.1 NC_029093_p102 hypothetical protein phrog_2785 unknown function unknown function 1 60648 61004
YP_009225375.1 NC_029093_p88 hypothetical protein phrog_2495 unknown function unknown function 1 53060 53428
YP_009225321.1 NC_029093_p34 hypothetical protein phrog_2424 unknown function unknown function 1 31301 31639
YP_009225386.1 NC_029093_p99 single stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 59117 59557
YP_009225377.1 NC_029093_p90 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 53520 54845
YP_009225363.1 NC_029093_p76 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 47576 47893
YP_009225292.1 NC_029093_p5 hypothetical protein phrog_3858 unknown function unknown function 1 783 935
YP_009225341.1 NC_029093_p54 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 39076 39507
YP_009225323.1 NC_029093_p36 hypothetical protein phrog_726 unknown function unknown function 1 32490 32906
YP_009225385.1 NC_029093_p98 DNA methylase phrog_67 DNA methyltransferase other 1 57904 59124
YP_009225336.1 NC_029093_p49 hypothetical protein phrog_2759 unknown function unknown function -1 35736 36131
YP_009225434.1 NC_029093_p147 hypothetical protein phrog_2762 unknown function unknown function 1 75004 75225
YP_009225344.1 NC_029093_p57 pentapeptide repeat protein phrog_923 unknown function unknown function 1 39962 40807
YP_009225313.1 NC_029093_p26 minor tail protein phrog_346 minor tail protein tail 1 22062 24458
YP_009225395.1 NC_029093_p108 hydrolase phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 62903 63277
YP_009225309.1 NC_029093_p22 tapemeasure protein phrog_2723 tail length tape measure protein tail 1 13112 17845
YP_009225302.1 NC_029093_p15 head-to-tail connector phrog_442 head-tail adaptor connector 1 9457 10023
YP_009225299.1 NC_029093_p12 capsid maturation protease phrog_2753 head maturation protease head and packaging 1 6616 7617
YP_009225416.1 NC_029093_p129 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 69340 69729
YP_009225333.1 NC_029093_p46 hypothetical protein phrog_2893 unknown function unknown function -1 35127 35363
YP_009225331.1 NC_029093_p44 hypothetical protein phrog_1155 unknown function unknown function -1 34790 34963
YP_009225359.1 NC_029093_p72 hypothetical protein phrog_572 unknown function unknown function 1 46383 46760
YP_009225422.1 NC_029093_p135 hypothetical protein phrog_4006 unknown function unknown function -1 71348 71866
YP_009225305.1 NC_029093_p18 head-to-tail connector phrog_813 head-tail adaptor connector 1 10726 11130
YP_009225346.1 NC_029093_p59 hypothetical protein phrog_2800 unknown function unknown function 1 40952 41230
YP_009225408.1 NC_029093_p121 hypothetical protein phrog_2174 unknown function unknown function 1 67306 67767
YP_009225349.1 NC_029093_p62 hypothetical protein phrog_3463 unknown function unknown function 1 42098 42205
YP_009225340.1 NC_029093_p53 hypothetical protein phrog_950 unknown function unknown function -1 38208 38981
YP_009225288.1 NC_029093_p1 hypothetical protein phrog_3456 unknown function unknown function 1 10 270
YP_009225362.1 NC_029093_p75 hypothetical protein phrog_289 GTP-binding domain other 1 47166 47579
YP_009225413.1 NC_029093_p126 hypothetical protein phrog_2897 unknown function unknown function 1 68425 68556
YP_009225387.1 NC_029093_p100 ClpP protease phrog_94 head maturation protease head and packaging 1 59673 60452
YP_009225330.1 NC_029093_p43 hypothetical protein phrog_722 unknown function unknown function -1 34317 34793
YP_009225326.1 NC_029093_p39 hypothetical protein phrog_10154 unknown function unknown function -1 33298 33444
YP_009225390.1 NC_029093_p103 hypothetical protein phrog_2757 unknown function unknown function 1 61005 61295
YP_009225418.1 NC_029093_p131 hypothetical protein phrog_8201 unknown function unknown function -1 70099 70173
YP_009225406.1 NC_029093_p119 hypothetical protein phrog_2279 unknown function unknown function 1 66892 67122
YP_009225367.1 NC_029093_p80 DnaB helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 49142 50350
YP_009225312.1 NC_029093_p25 minor tail protein phrog_732 minor tail protein tail 1 21212 22045
YP_009225361.1 NC_029093_p74 hypothetical protein phrog_2793 unknown function unknown function 1 46936 47169
YP_009225369.1 NC_029093_p82 WhiB phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 50532 50792
YP_009225365.1 NC_029093_p78 hypothetical protein phrog_1882 unknown function unknown function 1 48116 48766
YP_009225432.1 NC_029093_p145 hypothetical protein phrog_8479 unknown function unknown function -1 74353 74547
YP_009225415.1 NC_029093_p128 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 69080 69343
YP_009225345.1 NC_029093_p58 hypothetical protein phrog_2463 unknown function unknown function 1 40809 40955
YP_009225322.1 NC_029093_p35 lysin B phrog_102 endolysin lysis 1 31636 32493
YP_009225303.1 NC_029093_p16 head-to-tail connector phrog_1531 head closure connector 1 10036 10371
YP_009225407.1 NC_029093_p120 hypothetical protein phrog_3062 unknown function unknown function 1 67103 67357
YP_009225371.1 NC_029093_p84 hypothetical protein phrog_9963 unknown function unknown function 1 50981 51307
YP_009225358.1 NC_029093_p71 hypothetical protein phrog_1389 unknown function unknown function 1 46018 46386
YP_009225401.1 NC_029093_p114 hypothetical protein phrog_6210 unknown function unknown function 1 65325 65414
YP_009225289.1 NC_029093_p2 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
YP_009225368.1 NC_029093_p81 hypothetical protein phrog_1091 unknown function unknown function 1 50347 50535
YP_009225364.1 NC_029093_p77 hypothetical protein phrog_1673 unknown function unknown function 1 47883 48119
YP_009225399.1 NC_029093_p112 hypothetical protein phrog_3647 unknown function unknown function 1 64970 65122
YP_009225425.1 NC_029093_p138 hypothetical protein phrog_2287 unknown function unknown function -1 72318 72554
YP_009225351.1 NC_029093_p64 hypothetical protein phrog_2221 unknown function unknown function 1 42446 42607
YP_009225427.1 NC_029093_p140 hypothetical protein phrog_3174 unknown function unknown function -1 73098 73493
YP_009225417.1 NC_029093_p130 hypothetical protein phrog_2942 unknown function unknown function -1 69848 70102
YP_009225297.1 NC_029093_p10 hypothetical protein phrog_2845 unknown function unknown function 1 4849 5070
YP_009225310.1 NC_029093_p23 minor tail protein phrog_106 minor tail protein tail 1 17875 19536
YP_009225420.1 NC_029093_p133 hypothetical protein phrog_1915 unknown function unknown function -1 70535 70999
YP_009225354.1 NC_029093_p67 hypothetical protein phrog_572 unknown function unknown function 1 44119 44529
YP_009225410.1 NC_029093_p123 hypothetical protein phrog_2823 unknown function unknown function 1 67915 68115
YP_009225380.1 NC_029093_p93 hypothetical protein phrog_2853 unknown function unknown function 1 55977 56135
YP_009225414.1 NC_029093_p127 hypothetical protein phrog_3016 unknown function unknown function 1 68540 68701
YP_009225342.1 NC_029093_p55 hypothetical protein phrog_3071 unknown function unknown function 1 39733 39831
YP_009225430.1 NC_029093_p143 hypothetical protein phrog_2772 unknown function unknown function -1 73913 74140
YP_009225329.1 NC_029093_p42 hypothetical protein phrog_3481 unknown function unknown function -1 34126 34320
YP_009225350.1 NC_029093_p63 hypothetical protein phrog_2147 unknown function unknown function 1 42213 42446
YP_009225423.1 NC_029093_p136 hypothetical protein phrog_8217 unknown function unknown function -1 71887 72213
YP_009225332.1 NC_029093_p45 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 34963 35130
YP_009225378.1 NC_029093_p91 hypothetical protein phrog_1590 unknown function unknown function 1 54882 55703
YP_009225356.1 NC_029093_p69 hypothetical protein phrog_2750 unknown function unknown function 1 45237 45548
YP_009225319.1 NC_029093_p32 lysin A phrog_317 endolysin lysis 1 29488 30921
YP_009225314.1 NC_029093_p27 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 24455 27301
YP_009225429.1 NC_029093_p142 hypothetical protein phrog_1438 unknown function unknown function -1 73736 73909
YP_009225393.1 NC_029093_p106 hypothetical protein phrog_2846 unknown function unknown function 1 62336 62632
YP_009225327.1 NC_029093_p40 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 33449 33835
YP_009225398.1 NC_029093_p111 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 64188 64973
YP_009225400.1 NC_029093_p113 hypothetical protein phrog_8804 unknown function unknown function 1 65119 65328
YP_009225357.1 NC_029093_p70 hypothetical protein phrog_2771 unknown function unknown function 1 45548 46018
YP_009225388.1 NC_029093_p101 hypothetical protein phrog_1454 unknown function unknown function 1 60454 60651
YP_009225392.1 NC_029093_p105 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61664 61954
YP_009225311.1 NC_029093_p24 minor tail protein phrog_110 minor tail protein tail 1 19608 21203
YP_009225366.1 NC_029093_p79 hypothetical protein phrog_572 unknown function unknown function 1 48763 49095
YP_009225403.1 NC_029093_p116 RecA phrog_97 UvsX-like recombinase other 1 65661 66623
YP_009225391.1 NC_029093_p104 hypothetical protein phrog_1969 unknown function unknown function 1 61300 61611
YP_009225397.1 NC_029093_p110 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 63584 64177
YP_009225298.1 NC_029093_p11 portal protein phrog_12 portal protein head and packaging 1 5057 6613
YP_009225337.1 NC_029093_p50 hypothetical protein phrog_2847 unknown function unknown function -1 36418 36720
YP_009225411.1 NC_029093_p124 hypothetical protein phrog_2296 unknown function unknown function 1 68112 68249
YP_009225409.1 NC_029093_p122 hypothetical protein phrog_2764 unknown function unknown function 1 67764 67931
YP_009225348.1 NC_029093_p61 hypothetical protein phrog_2744 unknown function unknown function 1 41774 42079
YP_009225291.1 NC_029093_p4 hypothetical protein phrog_2775 unknown function unknown function 1 601 786
YP_009225334.1 NC_029093_p47 hypothetical protein phrog_2702 unknown function unknown function -1 35356 35571
YP_009225376.1 NC_029093_p89 hypothetical protein phrog_2844 unknown function unknown function 1 53401 53523
YP_009225318.1 NC_029093_p31 hypothetical protein phrog_411 unknown function unknown function 1 29061 29345
YP_009225353.1 NC_029093_p66 ERF protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 43154 44122