Genomic map of Rhodobacter phage RcTitan (NC_029097)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029097
Definition
Rhodobacter phage RcTitan, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Titanvirus.
DB of origin
REFSEQ
Length
44496
Host Name
Rhodobacter capsulatus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
55.13
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009225726.1 NC_029097_p61 hypothetical protein phrog_7597 unknown function unknown function 1 43633 44310
YP_009225690.1 NC_029097_p25 hypothetical protein phrog_1196 tail assembly chaperone tail 1 19918 20121
YP_009225701.1 NC_029097_p36 endonuclease singleton unknown function unknown function 1 32258 32764
YP_009225696.1 NC_029097_p31 exonuclease phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 28530 29513
YP_009225680.1 NC_029097_p15 head-to-tail joining protein phrog_161 head closure Hc1 connector 1 9655 10071
YP_009225695.1 NC_029097_p30 DEAD box helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 26888 28537
YP_009225716.1 NC_029097_p51 nucleotide pyrophosphohydrolase phrog_229 MazG-like pyrophosphatase other 1 39880 40467
YP_009225668.1 NC_029097_p3 hypothetical protein phrog_33202 unknown function unknown function 1 908 1006
YP_009225712.1 NC_029097_p47 hypothetical protein phrog_31936 unknown function unknown function 1 37845 38015
YP_009225715.1 NC_029097_p50 hypothetical protein phrog_29760 unknown function unknown function 1 39650 39883
YP_009225686.1 NC_029097_p21 tapemeasure phrog_3336 tail length tape measure protein tail 1 14026 17184
YP_009225672.1 NC_029097_p7 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1990 3603
YP_009225666.1 NC_029097_p1 hypothetical protein phrog_36946 unknown function unknown function 1 1 258
YP_009225678.1 NC_029097_p13 hypothetical protein phrog_28344 unknown function unknown function 1 8559 9128
YP_009225682.1 NC_029097_p17 hypothetical protein phrog_290 minor tail protein tail 1 10535 12748
YP_009225683.1 NC_029097_p18 tail chaperonin phrog_313 Tail assembly chaperone tail 1 12834 13253
YP_009225677.1 NC_029097_p12 hypothetical protein phrog_9062 unknown function unknown function 1 8064 8498
YP_009225684.1 NC_029097_p19 tail chaperonin phrog_3817 tail chaperonin tail 1 13271 13639
YP_009225687.1 NC_029097_p22 hypothetical protein phrog_1082 tail assembly protein tail 1 17177 18904
YP_009225675.1 NC_029097_p10 scaffold protein phrog_206 head scaffolding protein head and packaging 1 6280 6999
YP_009225708.1 NC_029097_p43 hypothetical protein phrog_38604 unknown function unknown function 1 36883 37104
YP_009225671.1 NC_029097_p6 terminase small subunit phrog_33410 terminase small subunit head and packaging 1 1413 2009
YP_009225720.1 NC_029097_p55 hypothetical protein phrog_34105 unknown function unknown function 1 41703 42065
YP_009225713.1 NC_029097_p48 HTH DNA binding protein phrog_31496 transcriptional regulator transcription regulation 1 38012 38644
YP_009225700.1 NC_029097_p35 hypothetical protein phrog_2480 unknown function unknown function -1 31603 32115
YP_009225698.1 NC_029097_p33 hypothetical protein phrog_6015 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 30004 30822
YP_009225679.1 NC_029097_p14 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 9141 9653
YP_009225691.1 NC_029097_p26 tail protein phrog_1101 tail protein tail 1 20124 22391
YP_009225670.1 NC_029097_p5 hypothetical protein phrog_37499 unknown function unknown function 1 1204 1356
YP_009225692.1 NC_029097_p27 hypothetical protein phrog_19311 unknown function unknown function 1 22393 23604
YP_009225673.1 NC_029097_p8 portal protein phrog_145 portal protein head and packaging 1 3617 5188
YP_009225704.1 NC_029097_p39 hypothetical protein phrog_34033 unknown function unknown function 1 35465 35611
YP_009225702.1 NC_029097_p37 replicative primase/helicase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism 1 32757 35069
YP_009225688.1 NC_029097_p23 hypothetical protein phrog_778 tail assembly protein tail 1 18901 19689
YP_009225669.1 NC_029097_p4 hypothetical protein phrog_34183 unknown function unknown function 1 993 1226
YP_009225725.1 NC_029097_p60 hypothetical protein phrog_32365 unknown function unknown function 1 43367 43525
YP_009225703.1 NC_029097_p38 hypothetical protein phrog_9154 unknown function unknown function 1 35041 35385
YP_009225710.1 NC_029097_p45 hypothetical protein singleton unknown function unknown function 1 37391 37582
YP_009225722.1 NC_029097_p57 hypothetical protein singleton unknown function unknown function 1 42400 42654
YP_009225697.1 NC_029097_p32 hypothetical protein phrog_1934 unknown function unknown function -1 29449 29946
YP_009225711.1 NC_029097_p46 hypothetical protein phrog_29142 unknown function unknown function 1 37579 37848
YP_009225717.1 NC_029097_p52 hypothetical protein phrog_29405 unknown function unknown function 1 40464 40907
YP_009225706.1 NC_029097_p41 hypothetical protein phrog_38097 unknown function unknown function 1 36367 36618
YP_009225714.1 NC_029097_p49 hypothetical protein phrog_29311 unknown function unknown function 1 38949 39653
YP_009225667.1 NC_029097_p2 peptidase phrog_17373 peptidase other 1 255 911
YP_009225718.1 NC_029097_p53 VRR endonuclease phrog_824 unknown function unknown function 1 40904 41404
YP_009225694.1 NC_029097_p29 replicative clamp phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 25647 26873
YP_009225723.1 NC_029097_p58 hypothetical protein phrog_18992 unknown function unknown function 1 42742 42966
YP_009225707.1 NC_029097_p42 hypothetical protein phrog_37117 unknown function unknown function 1 36668 36883
YP_009225705.1 NC_029097_p40 hypothetical protein phrog_30401 unknown function unknown function 1 35624 36331
YP_009225699.1 NC_029097_p34 recombinase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 30842 31525
YP_009225709.1 NC_029097_p44 hypothetical protein singleton unknown function unknown function 1 37186 37386
YP_009225685.1 NC_029097_p20 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 13587 14021
YP_009225676.1 NC_029097_p11 major capsid protein phrog_247 major head protein head and packaging 1 7018 7998
YP_009225689.1 NC_029097_p24 hypothetical protein phrog_1180 tail assembly chaperone tail 1 19700 19921
YP_009225719.1 NC_029097_p54 hypothetical protein phrog_474 phosphofructokinase other 1 41401 41706
YP_009225674.1 NC_029097_p9 head morphogenesis phrog_241 head morphogenesis head and packaging 1 5185 6234
YP_009225721.1 NC_029097_p56 hypothetical protein phrog_29030 unknown function unknown function 1 42062 42301
YP_009225681.1 NC_029097_p16 hypothetical protein phrog_179 tail terminator connector 1 10073 10516
YP_009225724.1 NC_029097_p59 hypothetical protein phrog_9241 unknown function unknown function 1 42979 43380
YP_009225693.1 NC_029097_p28 DNA polymerase phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 23601 25637