Genomic map of Pseudoalteromonas phage Pq0 (NC_029100)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_029100
Definition
Pseudoalteromonas phage Pq0, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
33399
Host Name
Pseudoalteromonas sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
40.28
Number of singletons
15
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009226079.1 NC_029100_p39 hypothetical protein phrog_17613 ATPase other -1 21312 22178
YP_009226093.1 NC_029100_p53 hypothetical protein phrog_9646 unknown function unknown function 1 27537 27980
YP_009226044.1 NC_029100_p4 hypothetical protein phrog_14264 unknown function unknown function 1 895 1083
YP_009226074.1 NC_029100_p34 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 17701 19014
YP_009226047.1 NC_029100_p7 hypothetical protein phrog_19815 unknown function unknown function -1 3287 3691
YP_009226077.1 NC_029100_p37 hypothetical protein singleton unknown function unknown function -1 20410 21003
YP_009226045.1 NC_029100_p5 tail length tape-measure protein 1 phrog_9483 tail length tape measure protein tail -1 1117 3087
YP_009226095.1 NC_029100_p55 PE family protein phrog_11439 tail fiber protein tail -1 30201 32336
YP_009226062.1 NC_029100_p22 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism -1 13629 14213
YP_009226090.1 NC_029100_p50 hypothetical protein singleton unknown function unknown function 1 26782 26967
YP_009226066.1 NC_029100_p26 hypothetical protein singleton unknown function unknown function -1 15663 16052
YP_009226064.1 NC_029100_p24 hypothetical protein phrog_7283 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism -1 15017 15469
YP_009226067.1 NC_029100_p27 hypothetical protein phrog_24860 unknown function unknown function -1 16052 16219
YP_009226083.1 NC_029100_p43 hypothetical protein singleton unknown function unknown function 1 23042 23401
YP_009226082.1 NC_029100_p42 hypothetical protein singleton unknown function unknown function 1 22863 23039
YP_009226086.1 NC_029100_p46 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 24807 25286
YP_009226048.1 NC_029100_p8 hypothetical protein phrog_1407 major tail protein tail -1 3694 4092
YP_009226096.1 NC_029100_p56 hypothetical protein phrog_11633 unknown function unknown function -1 32336 33346
YP_009226092.1 NC_029100_p52 hypothetical protein phrog_28598 unknown function unknown function 1 27361 27540
YP_009226050.1 NC_029100_p10 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 4551 5012
YP_009226071.1 NC_029100_p31 hypothetical protein singleton unknown function unknown function -1 17068 17298
YP_009226046.1 NC_029100_p6 hypothetical protein phrog_19523 unknown function unknown function -1 3084 3209
YP_009226051.1 NC_029100_p11 hypothetical protein phrog_25 head closure Hc1 connector -1 5020 5358
YP_009226080.1 NC_029100_p40 hypothetical protein phrog_19603 unknown function unknown function -1 22175 22378
YP_009226078.1 NC_029100_p38 hypothetical protein singleton unknown function unknown function -1 21134 21319
YP_009226094.1 NC_029100_p54 hypothetical protein singleton unknown function unknown function -1 28093 30204
YP_009226073.1 NC_029100_p33 hypothetical protein singleton unknown function unknown function -1 17508 17687
YP_009226068.1 NC_029100_p28 hypothetical protein phrog_2201 unknown function unknown function -1 16326 16595
YP_009226041.1 NC_029100_p1 hypothetical protein singleton unknown function unknown function 1 246 578
YP_009226085.1 NC_029100_p45 hypothetical protein phrog_1376 unknown function unknown function 1 24066 24794
YP_009226072.1 NC_029100_p32 hypothetical protein phrog_38213 unknown function unknown function -1 17377 17511
YP_009226081.1 NC_029100_p41 hypothetical protein phrog_16845 unknown function unknown function -1 22399 22722
YP_009226063.1 NC_029100_p23 hypothetical protein phrog_35489 unknown function unknown function -1 14722 15012
YP_009226060.1 NC_029100_p20 terminase small subunit phrog_1482 terminase small subunit head and packaging -1 12384 12806
YP_009226056.1 NC_029100_p16 gene transfer agent prohead protease phrog_80 head maturation protease head and packaging -1 8216 8845
YP_009226088.1 NC_029100_p48 hypothetical protein phrog_5434 unknown function unknown function 1 25941 26396
YP_009226065.1 NC_029100_p25 hypothetical protein singleton unknown function unknown function -1 15466 15666
YP_009226055.1 NC_029100_p15 major capsid protein phrog_10 major head protein head and packaging -1 6975 8189
YP_009226061.1 NC_029100_p21 hypothetical protein phrog_37502 unknown function unknown function -1 12929 13303
YP_009226058.1 NC_029100_p18 gene transfer agent portal protein phrog_12 portal protein head and packaging -1 9686 10990
YP_009226091.1 NC_029100_p51 lysozyme phrog_7 endolysin lysis 1 26945 27364
YP_009226089.1 NC_029100_p49 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 26397 26795
YP_009226052.1 NC_029100_p12 hypothetical protein phrog_442 head-tail adaptor connector -1 5375 5971
YP_009226070.1 NC_029100_p30 hypothetical protein singleton unknown function unknown function -1 16826 17068
YP_009226084.1 NC_029100_p44 single-strand DNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 23519 24064
YP_009226053.1 NC_029100_p13 hypothetical protein phrog_27311 unknown function unknown function -1 5968 6159
YP_009226043.1 NC_029100_p3 hypothetical protein singleton unknown function unknown function 1 770 898
YP_009226054.1 NC_029100_p14 hypothetical protein singleton unknown function unknown function 1 6452 6565
YP_009226059.1 NC_029100_p19 terminase large subunit phrog_2 terminase large subunit head and packaging -1 11039 12412
YP_009226076.1 NC_029100_p36 hypothetical protein phrog_6095 amidase lysis -1 19708 20358
YP_009226049.1 NC_029100_p9 hypothetical protein phrog_176 tail terminator connector -1 4108 4554
YP_009226057.1 NC_029100_p17 minor capsid protein phrog_2468 head morphogenesis head and packaging -1 8922 9698
YP_009226087.1 NC_029100_p47 hypothetical protein phrog_1770 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 25320 25775
YP_009226042.1 NC_029100_p2 hypothetical protein singleton unknown function unknown function 1 592 777
YP_009226075.1 NC_029100_p35 hypothetical protein phrog_270 replication initiation protein DNA, RNA and nucleotide metabolism -1 19004 19708
YP_009226069.1 NC_029100_p29 hypothetical protein phrog_10496 unknown function unknown function -1 16672 16839