| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_029106 |
Definition |
Achromobacter phage phiAxp-2, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
62220 |
Host Name |
Achromobacter xylosoxidans |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
60.11 |
Number of singletons |
48 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009226421.1 | NC_029106_p3 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 3451 | 3957 |
| YP_009226449.1 | NC_029106_p31 | hypothetical protein | phrog_1180 | tail assembly chaperone | tail | 1 | 34414 | 34653 |
| YP_009226491.1 | NC_029106_p73 | hypothetical protein | phrog_26404 | unknown function | unknown function | 1 | 56802 | 57029 |
| YP_009226481.1 | NC_029106_p63 | hypothetical protein | phrog_724 | exonuclease recombination-associated | DNA, RNA and nucleotide metabolism | -1 | 49876 | 51153 |
| YP_009226467.1 | NC_029106_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44030 | 44233 |
| YP_009226474.1 | NC_029106_p56 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47302 | 47901 |
| YP_009226432.1 | NC_029106_p14 | portal protein | phrog_21 | portal protein | head and packaging | 1 | 13682 | 15292 |
| YP_009226423.1 | NC_029106_p5 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 4453 | 5745 |
| YP_009226438.1 | NC_029106_p20 | hypothetical protein | phrog_4858 | unknown function | unknown function | 1 | 18783 | 19205 |
| YP_009226440.1 | NC_029106_p22 | hypothetical protein | phrog_5078 | tail terminator | connector | 1 | 19827 | 20420 |
| YP_009226459.1 | NC_029106_p41 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40934 | 41860 |
| YP_009226483.1 | NC_029106_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51474 | 51764 |
| YP_009226503.1 | NC_029106_p85 | hypothetical protein | singleton | unknown function | unknown function | 1 | 60720 | 61406 |
| YP_009226482.1 | NC_029106_p64 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51179 | 51472 |
| YP_009226484.1 | NC_029106_p66 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51860 | 52297 |
| YP_009226419.1 | NC_029106_p1 | hypothetical protein | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 444 | 2966 |
| YP_009226477.1 | NC_029106_p59 | hypothetical protein | singleton | unknown function | unknown function | -1 | 48309 | 48671 |
| YP_009226425.1 | NC_029106_p7 | DNA polymerase | phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 6507 | 8600 |
| YP_009226424.1 | NC_029106_p6 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 5792 | 6430 |
| YP_009226494.1 | NC_029106_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57481 | 57762 |
| YP_009226447.1 | NC_029106_p29 | hypothetical protein | phrog_778 | tail assembly protein | tail | 1 | 33448 | 34290 |
| YP_009226433.1 | NC_029106_p15 | 36K type signal peptide peptidase SppA | phrog_53 | head maturation protease | head and packaging | 1 | 15296 | 16675 |
| YP_009226439.1 | NC_029106_p21 | hypothetical protein | phrog_27 | tail completion or Neck1 protein | connector | 1 | 19208 | 19834 |
| YP_009226453.1 | NC_029106_p35 | hypothetical protein | phrog_5363 | unknown function | unknown function | 1 | 38046 | 38780 |
| YP_009226500.1 | NC_029106_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59301 | 59789 |
| YP_009226448.1 | NC_029106_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34301 | 34426 |
| YP_009226487.1 | NC_029106_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54041 | 54736 |
| YP_009226501.1 | NC_029106_p83 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59808 | 60353 |
| YP_009226462.1 | NC_029106_p44 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42510 | 42731 |
| YP_009226493.1 | NC_029106_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57153 | 57476 |
| YP_009226497.1 | NC_029106_p79 | hypothetical protein | phrog_2355 | unknown function | unknown function | 1 | 58480 | 58920 |
| YP_009226473.1 | NC_029106_p55 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46816 | 47238 |
| YP_009226454.1 | NC_029106_p36 | hypothetical protein | phrog_20672 | unknown function | unknown function | 1 | 38850 | 39266 |
| YP_009226469.1 | NC_029106_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44598 | 45155 |
| YP_009226480.1 | NC_029106_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 49608 | 49889 |
| YP_009226465.1 | NC_029106_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43179 | 43490 |
| YP_009226457.1 | NC_029106_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40536 | 40745 |
| YP_009226434.1 | NC_029106_p16 | decorator protein D | phrog_49 | head decoration | head and packaging | 1 | 16703 | 17080 |
| YP_009226476.1 | NC_029106_p58 | hypothetical protein | singleton | unknown function | unknown function | -1 | 48052 | 48309 |
| YP_009226504.1 | NC_029106_p86 | hypothetical protein | singleton | unknown function | unknown function | 1 | 61465 | 61638 |
| YP_009226498.1 | NC_029106_p80 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59004 | 59153 |
| YP_009226445.1 | NC_029106_p27 | 160 kDa protein | phrog_15324 | tail sheath and receptor binding protein | tail | 1 | 26749 | 30924 |
| YP_009226499.1 | NC_029106_p81 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59168 | 59296 |
| YP_009226437.1 | NC_029106_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18550 | 18783 |
| YP_009226450.1 | NC_029106_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34686 | 34877 |
| YP_009226470.1 | NC_029106_p52 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45216 | 45710 |
| YP_009226468.1 | NC_029106_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44230 | 44595 |
| YP_009226436.1 | NC_029106_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18233 | 18523 |
| YP_009226428.1 | NC_029106_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10528 | 10737 |
| YP_009226422.1 | NC_029106_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4042 | 4437 |
| YP_009226444.1 | NC_029106_p26 | hypothetical protein | phrog_2335 | tail length tape measure protein | tail | 1 | 21950 | 26752 |
| YP_009226456.1 | NC_029106_p38 | hypothetical protein | phrog_4928 | unknown function | unknown function | 1 | 39996 | 40481 |
| YP_009226458.1 | NC_029106_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40729 | 40887 |
| YP_009226466.1 | NC_029106_p48 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43480 | 43917 |
| YP_009226455.1 | NC_029106_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39424 | 39699 |
| YP_009226495.1 | NC_029106_p77 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57988 | 58239 |
| YP_009226426.1 | NC_029106_p8 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 8597 | 8890 |
| YP_009226443.1 | NC_029106_p25 | tail protein | phrog_9221 | tail length tape measure protein | tail | 1 | 21757 | 21966 |
| YP_009226490.1 | NC_029106_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55858 | 56799 |
| YP_009226442.1 | NC_029106_p24 | tail protein | phrog_5260 | tail protein | tail | 1 | 21263 | 21754 |
| YP_009226431.1 | NC_029106_p13 | head-to-tail joining protein | phrog_75 | head-tail adaptor Ad1 | connector | 1 | 13400 | 13651 |
| YP_009226420.1 | NC_029106_p2 | hypothetical protein | phrog_7401 | unknown function | unknown function | -1 | 3002 | 3301 |
| YP_009226461.1 | NC_029106_p43 | hypothetical protein | phrog_19679 | unknown function | unknown function | -1 | 42149 | 42520 |
| YP_009226478.1 | NC_029106_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 48674 | 48946 |
| YP_009226472.1 | NC_029106_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46353 | 46538 |
| YP_009226485.1 | NC_029106_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52792 | 53001 |
| YP_009226492.1 | NC_029106_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57026 | 57148 |
| YP_009226451.1 | NC_029106_p33 | hypothetical protein | phrog_1101 | tail protein | tail | 1 | 34874 | 37261 |
| YP_009226479.1 | NC_029106_p61 | hypothetical protein | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 48943 | 49611 |
| YP_009226460.1 | NC_029106_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41857 | 42147 |
| YP_009226429.1 | NC_029106_p11 | terminase small subunit | phrog_141 | terminase small subunit | head and packaging | 1 | 10727 | 11326 |
| YP_009226441.1 | NC_029106_p23 | hypothetical protein | phrog_807 | major tail protein with Ig-like domain | tail | 1 | 20456 | 21253 |
| YP_009226471.1 | NC_029106_p53 | hypothetical protein | phrog_4786 | cysteine dioxygenase | other | -1 | 45764 | 46351 |
| YP_009226489.1 | NC_029106_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55333 | 55644 |
| YP_009226463.1 | NC_029106_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42728 | 42982 |
| YP_009226464.1 | NC_029106_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42979 | 43158 |
| YP_009226496.1 | NC_029106_p78 | hypothetical protein | singleton | unknown function | unknown function | 1 | 58236 | 58466 |
| YP_009226430.1 | NC_029106_p12 | DNA packaging protein | phrog_15 | terminase large subunit | head and packaging | 1 | 11313 | 13400 |
| YP_009226446.1 | NC_029106_p28 | hypothetical protein | phrog_16150 | tail assembly protein | tail | 1 | 30927 | 33446 |
| YP_009226486.1 | NC_029106_p68 | hypothetical protein | phrog_7247 | unknown function | unknown function | 1 | 53072 | 54028 |
| YP_009226488.1 | NC_029106_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54761 | 55336 |
| YP_009226427.1 | NC_029106_p9 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 8937 | 10481 |
| YP_009226435.1 | NC_029106_p17 | hypothetical protein | phrog_29 | major head protein | head and packaging | 1 | 17108 | 18163 |
| YP_009226502.1 | NC_029106_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 60358 | 60711 |
| YP_009226452.1 | NC_029106_p34 | virion associated protein | phrog_807 | major tail protein with Ig-like domain | tail | 1 | 37258 | 38034 |
| YP_009226475.1 | NC_029106_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47903 | 48052 |