Genomic map of Gordonia phage Rosalind (NC_030694)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_030694
Definition
Gordonia phage Rosalind, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Soupsvirus; unclassified Soupsvirus.
DB of origin
REFSEQ
Length
52684
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
99
%GC
61.92
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009268972.1 NC_030694_p48 ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 30993 31718
YP_009268976.1 NC_030694_p52 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 32837 34900
YP_009268999.1 NC_030694_p75 hypothetical protein phrog_520 unknown function unknown function -1 43018 43296
YP_009268944.1 NC_030694_p20 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13538 13906
YP_009269013.1 NC_030694_p89 hypothetical protein phrog_1946 unknown function unknown function -1 47931 48173
YP_009268994.1 NC_030694_p70 hypothetical protein phrog_762 unknown function unknown function -1 40768 41184
YP_009268986.1 NC_030694_p62 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38267 38647
YP_009268925.1 NC_030694_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 577 1407
YP_009269010.1 NC_030694_p86 hypothetical protein phrog_12613 unknown function unknown function -1 47308 47478
YP_009268996.1 NC_030694_p72 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41748 42578
YP_009268938.1 NC_030694_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10872 11384
YP_009268927.1 NC_030694_p3 hypothetical protein phrog_4491 unknown function unknown function 1 2129 2428
YP_009268945.1 NC_030694_p21 hypothetical protein phrog_123 tail terminator connector 1 13919 14329
YP_009268970.1 NC_030694_p46 hypothetical protein phrog_690 unknown function unknown function -1 30509 30736
YP_009269018.1 NC_030694_p94 hypothetical protein phrog_6351 unknown function unknown function -1 49673 50038
YP_009268939.1 NC_030694_p15 capsid protein phrog_10 major head protein head and packaging 1 11417 12367
YP_009268984.1 NC_030694_p60 hypothetical protein phrog_13334 unknown function unknown function -1 37595 37807
YP_009269019.1 NC_030694_p95 hypothetical protein phrog_14166 unknown function unknown function -1 50041 50271
YP_009268969.1 NC_030694_p45 HTH DNA binding domain protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 30219 30512
YP_009269003.1 NC_030694_p79 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 44983 45504
YP_009268941.1 NC_030694_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 12612 12989
YP_009268973.1 NC_030694_p49 MazG phrog_229 MazG-like pyrophosphatase other -1 31715 32059
YP_009268959.1 NC_030694_p35 hypothetical protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 25726 25965
YP_009268929.1 NC_030694_p5 tail protein phrog_226 minor tail protein tail 1 2757 3212
YP_009268979.1 NC_030694_p55 RDF protein phrog_354 sigma-K factor transcription regulation -1 35251 35823
YP_009268931.1 NC_030694_p7 hypothetical protein phrog_1197 tail protein tail 1 3561 4553
YP_009268997.1 NC_030694_p73 hypothetical protein phrog_9751 unknown function unknown function -1 42643 42816
YP_009268934.1 NC_030694_p10 holin phrog_13682 holin lysis 1 6565 6792
YP_009268952.1 NC_030694_p28 minor tail protein phrog_352 minor tail protein tail 1 21087 21530
YP_009268998.1 NC_030694_p74 hypothetical protein phrog_10900 unknown function unknown function -1 42827 43021
YP_009268930.1 NC_030694_p6 tail protein phrog_1126 unknown function unknown function 1 3229 3564
YP_009269015.1 NC_030694_p91 hypothetical protein phrog_13953 unknown function unknown function -1 48289 48702
YP_009268995.1 NC_030694_p71 hypothetical protein phrog_13179 unknown function unknown function -1 41217 41705
YP_009269022.1 NC_030694_p98 hypothetical protein phrog_7225 unknown function unknown function -1 50693 50902
YP_009268935.1 NC_030694_p11 terminase phrog_9 terminase large subunit head and packaging 1 6808 8505
YP_009268942.1 NC_030694_p18 hypothetical protein phrog_830 head-tail connector protein connector 1 12986 13183
YP_009268977.1 NC_030694_p53 hypothetical protein phrog_2046 unknown function unknown function -1 34897 35088
YP_009268954.1 NC_030694_p30 minor tail protein phrog_2689 minor tail protein tail 1 21865 23577
YP_009268990.1 NC_030694_p66 hypothetical protein phrog_13833 membrane protein moron, auxiliary metabolic gene and host takeover -1 39926 40039
YP_009268993.1 NC_030694_p69 hypothetical protein phrog_1374 unknown function unknown function -1 40586 40765
YP_009269005.1 NC_030694_p81 hypothetical protein phrog_14317 unknown function unknown function -1 46134 46406
YP_009268940.1 NC_030694_p16 hypothetical protein phrog_748 head-tail connector protein connector 1 12438 12608
YP_009268951.1 NC_030694_p27 minor tail protein phrog_110 minor tail protein tail 1 19215 21002
YP_009269006.1 NC_030694_p82 hypothetical protein phrog_865 HNH endonuclease DNA, RNA and nucleotide metabolism -1 46403 46579
YP_009268980.1 NC_030694_p56 phosphoesterase phrog_221 metallo-phosphoesterase other -1 35949 36713
YP_009268965.1 NC_030694_p41 hypothetical protein phrog_13791 unknown function unknown function -1 27382 27606
YP_009268988.1 NC_030694_p64 lysin B phrog_6187 unknown function unknown function -1 38852 39487
YP_009269001.1 NC_030694_p77 RecB phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43724 44572
YP_009268953.1 NC_030694_p29 minor tail protein phrog_404 minor tail protein tail 1 21527 21868
YP_009268961.1 NC_030694_p37 hypothetical protein phrog_980 unknown function unknown function -1 26307 26534
YP_009269000.1 NC_030694_p76 hypothetical protein phrog_4160 unknown function unknown function -1 43323 43712
YP_009268955.1 NC_030694_p31 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 1 23657 24013
YP_009268966.1 NC_030694_p42 hypothetical protein phrog_16184 unknown function unknown function -1 27603 28058
YP_009269012.1 NC_030694_p88 hypothetical protein phrog_14026 unknown function unknown function -1 47709 47876
YP_009268950.1 NC_030694_p26 minor tail protein phrog_106 minor tail protein tail 1 18241 19218
YP_009269017.1 NC_030694_p93 hypothetical protein phrog_18197 unknown function unknown function -1 49451 49594
YP_009268949.1 NC_030694_p25 tape measure protein phrog_305 tail length tape measure protein tail 1 16045 18231
YP_009268936.1 NC_030694_p12 portal protein phrog_104 portal protein head and packaging 1 8502 9962
YP_009268975.1 NC_030694_p51 hypothetical protein phrog_13800 membrane protein moron, auxiliary metabolic gene and host takeover -1 32739 32852
YP_009269004.1 NC_030694_p80 hypothetical protein phrog_13943 unknown function unknown function -1 45902 46150
YP_009269007.1 NC_030694_p83 hypothetical protein singleton unknown function unknown function -1 46589 46789
YP_009268943.1 NC_030694_p19 hypothetical protein phrog_320 head closure Hc1 connector 1 13170 13538
YP_009268982.1 NC_030694_p58 hypothetical protein phrog_4589 unknown function unknown function -1 37156 37332
YP_009268956.1 NC_030694_p32 hypothetical protein phrog_4480 unknown function unknown function 1 24010 24318
YP_009268968.1 NC_030694_p44 hypothetical protein phrog_762 unknown function unknown function -1 29863 30222
YP_009268946.1 NC_030694_p22 major tail protein phrog_117 major tail protein tail 1 14354 14956
YP_009268932.1 NC_030694_p8 hypothetical protein phrog_356 minor tail protein tail 1 4550 5224
YP_009268937.1 NC_030694_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9959 10819
YP_009268989.1 NC_030694_p65 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39484 39942
YP_009268971.1 NC_030694_p47 hypothetical protein phrog_1454 unknown function unknown function -1 30736 30984
YP_009268981.1 NC_030694_p57 hypothetical protein phrog_2387 nucleotide kinase other -1 36710 37159
YP_009268963.1 NC_030694_p39 hypothetical protein phrog_13673 unknown function unknown function -1 26908 27141
YP_009268947.1 NC_030694_p23 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15070 15974
YP_009268926.1 NC_030694_p2 ADP-ribosyltransferase phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1482 2132
YP_009268933.1 NC_030694_p9 lysin A phrog_2998 endolysin lysis 1 5514 6554
YP_009268987.1 NC_030694_p63 hypothetical protein phrog_13497 unknown function unknown function -1 38673 38852
YP_009269020.1 NC_030694_p96 hypothetical protein phrog_13636 unknown function unknown function -1 50274 50456
YP_009269023.1 NC_030694_p99 hypothetical protein phrog_13265 unknown function unknown function -1 50906 51190
YP_009269008.1 NC_030694_p84 hypothetical protein phrog_12580 unknown function unknown function -1 46839 47120
YP_009268960.1 NC_030694_p36 hypothetical protein phrog_11556 unknown function unknown function 1 25932 26144
YP_009268983.1 NC_030694_p59 NrdH-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 37329 37598
YP_009268958.1 NC_030694_p34 ParB phrog_2639 Arc-like repressor transcription regulation 1 25360 25674
YP_009268991.1 NC_030694_p67 hypothetical protein phrog_14261 membrane protein moron, auxiliary metabolic gene and host takeover -1 40036 40134
YP_009269014.1 NC_030694_p90 hypothetical protein phrog_9204 unknown function unknown function -1 48173 48292
YP_009268967.1 NC_030694_p43 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28072 29862
YP_009269002.1 NC_030694_p78 hypothetical protein phrog_1562 unknown function unknown function -1 44569 44967
YP_009268985.1 NC_030694_p61 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37804 38436
YP_009269009.1 NC_030694_p85 hypothetical protein phrog_9830 unknown function unknown function -1 47123 47308
YP_009268978.1 NC_030694_p54 hypothetical protein phrog_499 unknown function unknown function -1 35085 35267
YP_009268948.1 NC_030694_p24 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15070 15453
YP_009268974.1 NC_030694_p50 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 32176 32742
YP_009268992.1 NC_030694_p68 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40177 40575
YP_009268962.1 NC_030694_p38 hypothetical protein phrog_383 unknown function unknown function -1 26534 26908
YP_009269016.1 NC_030694_p92 hypothetical protein phrog_2554 unknown function unknown function -1 48733 49461
YP_009269021.1 NC_030694_p97 hypothetical protein phrog_10850 unknown function unknown function -1 50458 50691
YP_009268964.1 NC_030694_p40 hypothetical protein phrog_3771 unknown function unknown function -1 27134 27382
YP_009269011.1 NC_030694_p87 hypothetical protein phrog_15584 unknown function unknown function -1 47524 47706
YP_009268957.1 NC_030694_p33 ParA phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 24801 25367
YP_009268928.1 NC_030694_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2425 2721