| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_030695 |
Definition |
Gordonia phage KatherineG, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Soupsvirus; unclassified Soupsvirus. |
DB of origin |
REFSEQ |
Length |
52689 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
98 |
%GC |
61.92 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009269109.1 | NC_030695_p86 | hypothetical protein | phrog_12613 | unknown function | unknown function | -1 | 47542 | 47712 |
| YP_009269061.1 | NC_030695_p38 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26469 | 26678 |
| YP_009269049.1 | NC_030695_p26 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18241 | 19218 |
| YP_009269084.1 | NC_030695_p61 | NrdH-like protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 37595 | 37864 |
| YP_009269086.1 | NC_030695_p63 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38070 | 38702 |
| YP_009269081.1 | NC_030695_p58 | phosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 36230 | 36994 |
| YP_009269045.1 | NC_030695_p22 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 14354 | 14956 |
| YP_009269068.1 | NC_030695_p45 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 28392 | 30182 |
| YP_009269093.1 | NC_030695_p70 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | -1 | 40443 | 40841 |
| YP_009269027.1 | NC_030695_p4 | hypothetical protein | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2425 | 2721 |
| YP_009269072.1 | NC_030695_p49 | hypothetical protein | phrog_690 | unknown function | unknown function | -1 | 31065 | 31295 |
| YP_009269058.1 | NC_030695_p35 | hypothetical protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | 1 | 25726 | 25965 |
| YP_009269077.1 | NC_030695_p54 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 33118 | 35181 |
| YP_009269085.1 | NC_030695_p62 | hypothetical protein | phrog_13334 | unknown function | unknown function | -1 | 37861 | 38073 |
| YP_009269108.1 | NC_030695_p85 | hypothetical protein | phrog_12580 | unknown function | unknown function | -1 | 47233 | 47529 |
| YP_009269035.1 | NC_030695_p12 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8502 | 9962 |
| YP_009269060.1 | NC_030695_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26293 | 26472 |
| YP_009269056.1 | NC_030695_p33 | ParA | phrog_164 | ParA-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 24801 | 25367 |
| YP_009269062.1 | NC_030695_p39 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 26720 | 27094 |
| YP_009269057.1 | NC_030695_p34 | ParB | phrog_2639 | Arc-like repressor | transcription regulation | 1 | 25360 | 25674 |
| YP_009269117.1 | NC_030695_p94 | hypothetical protein | phrog_6351 | unknown function | unknown function | -1 | 49909 | 50274 |
| YP_009269098.1 | NC_030695_p75 | hypothetical protein | phrog_9751 | unknown function | unknown function | -1 | 42891 | 43064 |
| YP_009269029.1 | NC_030695_p6 | tail protein | phrog_1126 | unknown function | unknown function | 1 | 3229 | 3564 |
| YP_009269051.1 | NC_030695_p28 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 21087 | 21530 |
| YP_009269105.1 | NC_030695_p82 | hypothetical protein | phrog_13943 | unknown function | unknown function | -1 | 46150 | 46398 |
| YP_009269107.1 | NC_030695_p84 | SprT-like protein | phrog_1006 | unknown function | unknown function | -1 | 46651 | 47118 |
| YP_009269053.1 | NC_030695_p30 | minor tail protein | phrog_2689 | minor tail protein | tail | 1 | 21865 | 23577 |
| YP_009269099.1 | NC_030695_p76 | hypothetical protein | phrog_10900 | unknown function | unknown function | -1 | 43075 | 43269 |
| YP_009269094.1 | NC_030695_p71 | hypothetical protein | phrog_1374 | unknown function | unknown function | -1 | 40852 | 41031 |
| YP_009269075.1 | NC_030695_p52 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 32460 | 33020 |
| YP_009269032.1 | NC_030695_p9 | lysin A | phrog_2998 | endolysin | lysis | 1 | 5514 | 6554 |
| YP_009269069.1 | NC_030695_p46 | hypothetical protein | phrog_762 | unknown function | unknown function | -1 | 30183 | 30542 |
| YP_009269078.1 | NC_030695_p55 | hypothetical protein | phrog_2046 | unknown function | unknown function | -1 | 35178 | 35369 |
| YP_009269066.1 | NC_030695_p43 | hypothetical protein | phrog_13791 | unknown function | unknown function | -1 | 27702 | 27926 |
| YP_009269113.1 | NC_030695_p90 | hypothetical protein | phrog_9204 | unknown function | unknown function | -1 | 48409 | 48528 |
| YP_009269104.1 | NC_030695_p81 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 45231 | 45752 |
| YP_009269044.1 | NC_030695_p21 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 13919 | 14329 |
| YP_009269095.1 | NC_030695_p72 | hypothetical protein | phrog_762 | unknown function | unknown function | -1 | 41034 | 41450 |
| YP_009269091.1 | NC_030695_p68 | hypothetical protein | phrog_13833 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 40192 | 40305 |
| YP_009269065.1 | NC_030695_p42 | hypothetical protein | phrog_3771 | unknown function | unknown function | -1 | 27454 | 27702 |
| YP_009269048.1 | NC_030695_p25 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16045 | 18231 |
| YP_009269121.1 | NC_030695_p98 | hypothetical protein | phrog_13265 | unknown function | unknown function | -1 | 50910 | 51194 |
| YP_009269042.1 | NC_030695_p19 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 13170 | 13538 |
| YP_009269054.1 | NC_030695_p31 | Lsr2 | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | 1 | 23657 | 24013 |
| YP_009269043.1 | NC_030695_p20 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13538 | 13906 |
| YP_009269047.1 | NC_030695_p24 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15070 | 15453 |
| YP_009269092.1 | NC_030695_p69 | hypothetical protein | phrog_14261 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 40302 | 40400 |
| YP_009269050.1 | NC_030695_p27 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 19215 | 21002 |
| YP_009269090.1 | NC_030695_p67 | EndoVII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39750 | 40208 |
| YP_009269070.1 | NC_030695_p47 | hypothetical protein | phrog_13814 | transcriptional regulator | transcription regulation | -1 | 30542 | 30778 |
| YP_009269031.1 | NC_030695_p8 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 4550 | 5224 |
| YP_009269112.1 | NC_030695_p89 | hypothetical protein | phrog_1946 | unknown function | unknown function | -1 | 48167 | 48409 |
| YP_009269082.1 | NC_030695_p59 | hypothetical protein | phrog_2387 | nucleotide kinase | other | -1 | 36991 | 37425 |
| YP_009269115.1 | NC_030695_p92 | hypothetical protein | phrog_2554 | unknown function | unknown function | -1 | 48969 | 49697 |
| YP_009269039.1 | NC_030695_p16 | hypothetical protein | phrog_748 | head-tail connector protein | connector | 1 | 12438 | 12608 |
| YP_009269114.1 | NC_030695_p91 | hypothetical protein | phrog_13953 | unknown function | unknown function | -1 | 48525 | 48938 |
| YP_009269038.1 | NC_030695_p15 | capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11417 | 12367 |
| YP_009269052.1 | NC_030695_p29 | minor tail protein | phrog_404 | minor tail protein | tail | 1 | 21527 | 21868 |
| YP_009269110.1 | NC_030695_p87 | hypothetical protein | phrog_15584 | unknown function | unknown function | -1 | 47759 | 47941 |
| YP_009269079.1 | NC_030695_p56 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35366 | 35548 |
| YP_009269087.1 | NC_030695_p64 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38533 | 38913 |
| YP_009269046.1 | NC_030695_p23 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15070 | 15974 |
| YP_009269040.1 | NC_030695_p17 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 12612 | 12989 |
| YP_009269024.1 | NC_030695_p1 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 577 | 1407 |
| YP_009269101.1 | NC_030695_p78 | hypothetical protein | phrog_4160 | unknown function | unknown function | -1 | 43571 | 43960 |
| YP_009269120.1 | NC_030695_p97 | hypothetical protein | phrog_7225 | unknown function | unknown function | -1 | 50697 | 50906 |
| YP_009269055.1 | NC_030695_p32 | hypothetical protein | phrog_4480 | unknown function | unknown function | 1 | 24010 | 24318 |
| YP_009269111.1 | NC_030695_p88 | hypothetical protein | phrog_14026 | unknown function | unknown function | -1 | 47945 | 48112 |
| YP_009269063.1 | NC_030695_p40 | hypothetical protein | phrog_14604 | unknown function | unknown function | -1 | 27094 | 27228 |
| YP_009269096.1 | NC_030695_p73 | hypothetical protein | phrog_13179 | unknown function | unknown function | -1 | 41483 | 41953 |
| YP_009269080.1 | NC_030695_p57 | transcription regulator | phrog_354 | sigma-K factor | transcription regulation | -1 | 35532 | 36104 |
| YP_009269026.1 | NC_030695_p3 | hypothetical protein | phrog_4491 | unknown function | unknown function | 1 | 2129 | 2428 |
| YP_009269059.1 | NC_030695_p36 | hypothetical protein | phrog_11556 | unknown function | unknown function | 1 | 25932 | 26144 |
| YP_009269028.1 | NC_030695_p5 | tail protein | phrog_226 | minor tail protein | tail | 1 | 2757 | 3212 |
| YP_009269030.1 | NC_030695_p7 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 3561 | 4553 |
| YP_009269033.1 | NC_030695_p10 | holin | phrog_13682 | holin | lysis | 1 | 6565 | 6792 |
| YP_009269025.1 | NC_030695_p2 | ADP-ribosyltransferase | phrog_3895 | ADP-ribosyltransferase exoenzyme toxin | moron, auxiliary metabolic gene and host takeover | 1 | 1482 | 2132 |
| YP_009269119.1 | NC_030695_p96 | hypothetical protein | phrog_13636 | unknown function | unknown function | -1 | 50510 | 50695 |
| YP_009269071.1 | NC_030695_p48 | HTH DNA binding domain protein | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 30775 | 31068 |
| YP_009269102.1 | NC_030695_p79 | RecB-like protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43972 | 44820 |
| YP_009269037.1 | NC_030695_p14 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 10872 | 11384 |
| YP_009269064.1 | NC_030695_p41 | hypothetical protein | phrog_13673 | unknown function | unknown function | -1 | 27228 | 27461 |
| YP_009269041.1 | NC_030695_p18 | hypothetical protein | phrog_830 | head-tail connector protein | connector | 1 | 12986 | 13183 |
| YP_009269034.1 | NC_030695_p11 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 6808 | 8505 |
| YP_009269067.1 | NC_030695_p44 | hypothetical protein | phrog_16184 | unknown function | unknown function | -1 | 27923 | 28378 |
| YP_009269097.1 | NC_030695_p74 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 41996 | 42826 |
| YP_009269106.1 | NC_030695_p83 | hypothetical protein | phrog_14317 | unknown function | unknown function | -1 | 46382 | 46654 |
| YP_009269074.1 | NC_030695_p51 | MazG-like protein | phrog_229 | MazG-like pyrophosphatase | other | -1 | 31999 | 32343 |
| YP_009269100.1 | NC_030695_p77 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 43266 | 43544 |
| YP_009269076.1 | NC_030695_p53 | hypothetical protein | phrog_13800 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 33017 | 33133 |
| YP_009269116.1 | NC_030695_p93 | hypothetical protein | phrog_18197 | unknown function | unknown function | -1 | 49687 | 49830 |
| YP_009269089.1 | NC_030695_p66 | lysin B | phrog_6187 | unknown function | unknown function | -1 | 39118 | 39753 |
| YP_009269083.1 | NC_030695_p60 | hypothetical protein | phrog_4589 | unknown function | unknown function | -1 | 37422 | 37598 |
| YP_009269036.1 | NC_030695_p13 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 9959 | 10819 |
| YP_009269103.1 | NC_030695_p80 | hypothetical protein | phrog_1562 | unknown function | unknown function | -1 | 44817 | 45215 |
| YP_009269073.1 | NC_030695_p50 | ThyX | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 31304 | 32002 |
| YP_009269118.1 | NC_030695_p95 | hypothetical protein | phrog_14166 | unknown function | unknown function | -1 | 50277 | 50507 |
| YP_009269088.1 | NC_030695_p65 | hypothetical protein | phrog_13497 | unknown function | unknown function | -1 | 38939 | 39118 |