Genomic map of Gordonia phage Soups (NC_030698)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_030698
Definition
Gordonia phage Soups, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Soupsvirus.
DB of origin
REFSEQ
Length
52924
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
99
%GC
61.86
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009269367.1 NC_030698_p66 lysin B phrog_6187 unknown function unknown function -1 39144 39779
YP_009269312.1 NC_030698_p11 terminase phrog_9 terminase large subunit head and packaging 1 6808 8505
YP_009269332.1 NC_030698_p31 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 1 23657 24013
YP_009269323.1 NC_030698_p22 major tail protein phrog_117 major tail protein tail 1 14354 14956
YP_009269325.1 NC_030698_p24 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15070 15453
YP_009269388.1 NC_030698_p87 hypothetical protein phrog_12613 unknown function unknown function -1 47785 47955
YP_009269391.1 NC_030698_p90 hypothetical protein phrog_1946 unknown function unknown function -1 48408 48650
YP_009269345.1 NC_030698_p44 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28153 29943
YP_009269360.1 NC_030698_p59 hypothetical protein phrog_2387 nucleotide kinase other -1 36993 37451
YP_009269387.1 NC_030698_p86 hypothetical protein phrog_9830 unknown function unknown function -1 47600 47785
YP_009269311.1 NC_030698_p10 holin phrog_13682 holin lysis 1 6565 6792
YP_009269390.1 NC_030698_p89 hypothetical protein phrog_14026 unknown function unknown function -1 48186 48353
YP_009269338.1 NC_030698_p37 hypothetical protein phrog_25843 unknown function unknown function -1 26293 26469
YP_009269318.1 NC_030698_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 12612 12989
YP_009269339.1 NC_030698_p38 hypothetical protein phrog_383 unknown function unknown function -1 26466 26855
YP_009269356.1 NC_030698_p55 hypothetical protein phrog_2046 unknown function unknown function -1 35180 35371
YP_009269362.1 NC_030698_p61 NrdH-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 37621 37890
YP_009269347.1 NC_030698_p46 hypothetical protein phrog_13814 transcriptional regulator transcription regulation -1 30303 30539
YP_009269313.1 NC_030698_p12 portal protein phrog_104 portal protein head and packaging 1 8502 9962
YP_009269349.1 NC_030698_p48 hypothetical protein phrog_690 unknown function unknown function -1 30826 31056
YP_009269365.1 NC_030698_p64 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38559 38939
YP_009269310.1 NC_030698_p9 lysin A phrog_2998 endolysin lysis 1 5514 6554
YP_009269348.1 NC_030698_p47 HTH DNA binding domain protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 30536 30829
YP_009269372.1 NC_030698_p71 hypothetical protein phrog_1374 unknown function unknown function -1 40864 41058
YP_009269400.1 NC_030698_p99 hypothetical protein phrog_13265 unknown function unknown function -1 51151 51435
YP_009269358.1 NC_030698_p57 transcription regulator phrog_354 sigma-K factor transcription regulation -1 35534 36106
YP_009269385.1 NC_030698_p84 hypothetical protein phrog_421 unknown function unknown function -1 46484 47266
YP_009269341.1 NC_030698_p40 hypothetical protein phrog_13673 unknown function unknown function -1 26989 27222
YP_009269315.1 NC_030698_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10872 11384
YP_009269399.1 NC_030698_p98 hypothetical protein phrog_7225 unknown function unknown function -1 50938 51147
YP_009269369.1 NC_030698_p68 hypothetical protein phrog_13833 membrane protein moron, auxiliary metabolic gene and host takeover -1 40218 40331
YP_009269322.1 NC_030698_p21 hypothetical protein phrog_123 tail terminator connector 1 13919 14329
YP_009269373.1 NC_030698_p72 hypothetical protein phrog_762 unknown function unknown function -1 41061 41477
YP_009269359.1 NC_030698_p58 phosphoesterase phrog_221 metallo-phosphoesterase other -1 36232 36996
YP_009269392.1 NC_030698_p91 hypothetical protein phrog_9204 unknown function unknown function -1 48650 48769
YP_009269307.1 NC_030698_p6 tail protein phrog_1126 unknown function unknown function 1 3229 3564
YP_009269384.1 NC_030698_p83 hypothetical protein phrog_865 HNH endonuclease DNA, RNA and nucleotide metabolism -1 46298 46474
YP_009269371.1 NC_030698_p70 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40469 40867
YP_009269380.1 NC_030698_p79 hypothetical protein phrog_1562 unknown function unknown function -1 44464 44862
YP_009269383.1 NC_030698_p82 hypothetical protein phrog_14317 unknown function unknown function -1 46029 46301
YP_009269366.1 NC_030698_p65 hypothetical protein phrog_13497 unknown function unknown function -1 38965 39144
YP_009269308.1 NC_030698_p7 hypothetical protein phrog_1197 tail protein tail 1 3561 4553
YP_009269305.1 NC_030698_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2425 2721
YP_009269352.1 NC_030698_p51 MazG phrog_229 MazG-like pyrophosphatase other -1 31996 32340
YP_009269386.1 NC_030698_p85 hypothetical protein phrog_12580 unknown function unknown function -1 47316 47597
YP_009269326.1 NC_030698_p25 tape measure protein phrog_305 tail length tape measure protein tail 1 16045 18231
YP_009269376.1 NC_030698_p75 hypothetical protein phrog_9751 unknown function unknown function -1 42936 43109
YP_009269342.1 NC_030698_p41 hypothetical protein phrog_3771 unknown function unknown function -1 27215 27463
YP_009269304.1 NC_030698_p3 hypothetical protein phrog_4491 unknown function unknown function 1 2129 2428
YP_009269340.1 NC_030698_p39 hypothetical protein phrog_14604 unknown function unknown function -1 26855 26989
YP_009269378.1 NC_030698_p77 hypothetical protein phrog_520 unknown function unknown function -1 43311 43589
YP_009269319.1 NC_030698_p18 hypothetical protein phrog_830 head-tail connector protein connector 1 12986 13183
YP_009269329.1 NC_030698_p28 minor tail protein phrog_352 minor tail protein tail 1 21087 21530
YP_009269314.1 NC_030698_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9959 10819
YP_009269382.1 NC_030698_p81 hypothetical protein phrog_13943 unknown function unknown function -1 45797 46045
YP_009269328.1 NC_030698_p27 minor tail protein phrog_110 minor tail protein tail 1 19215 21002
YP_009269377.1 NC_030698_p76 hypothetical protein phrog_10900 unknown function unknown function -1 43120 43314
YP_009269363.1 NC_030698_p62 hypothetical protein phrog_13334 unknown function unknown function -1 37887 38099
YP_009269303.1 NC_030698_p2 ADP-ribosyltransferase phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1482 2132
YP_009269368.1 NC_030698_p67 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39776 40234
YP_009269337.1 NC_030698_p36 hypothetical protein phrog_11556 unknown function unknown function 1 25932 26144
YP_009269398.1 NC_030698_p97 hypothetical protein phrog_13636 unknown function unknown function -1 50751 50936
YP_009269343.1 NC_030698_p42 hypothetical protein phrog_13791 unknown function unknown function -1 27463 27687
YP_009269355.1 NC_030698_p54 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33120 35183
YP_009269389.1 NC_030698_p88 hypothetical protein phrog_15584 unknown function unknown function -1 48001 48183
YP_009269375.1 NC_030698_p74 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42041 42871
YP_009269327.1 NC_030698_p26 minor tail protein phrog_106 minor tail protein tail 1 18241 19218
YP_009269334.1 NC_030698_p33 ParA phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 24801 25367
YP_009269353.1 NC_030698_p52 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 32456 33022
YP_009269321.1 NC_030698_p20 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13538 13906
YP_009269320.1 NC_030698_p19 hypothetical protein phrog_320 head closure Hc1 connector 1 13170 13538
YP_009269357.1 NC_030698_p56 hypothetical protein phrog_499 unknown function unknown function -1 35368 35550
YP_009269397.1 NC_030698_p96 hypothetical protein phrog_14166 unknown function unknown function -1 50518 50748
YP_009269302.1 NC_030698_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 577 1407
YP_009269331.1 NC_030698_p30 minor tail protein phrog_2689 minor tail protein tail 1 21865 23577
YP_009269394.1 NC_030698_p93 hypothetical protein phrog_2554 unknown function unknown function -1 49210 49938
YP_009269316.1 NC_030698_p15 capsid protein phrog_10 major head protein head and packaging 1 11417 12367
YP_009269324.1 NC_030698_p23 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15070 15974
YP_009269364.1 NC_030698_p63 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38096 38728
YP_009269370.1 NC_030698_p69 hypothetical protein phrog_14261 membrane protein moron, auxiliary metabolic gene and host takeover -1 40328 40426
YP_009269335.1 NC_030698_p34 ParB phrog_2639 Arc-like repressor transcription regulation 1 25360 25674
YP_009269306.1 NC_030698_p5 tail protein phrog_226 minor tail protein tail 1 2757 3212
YP_009269361.1 NC_030698_p60 hypothetical protein phrog_4589 unknown function unknown function -1 37448 37624
YP_009269354.1 NC_030698_p53 hypothetical protein phrog_13800 membrane protein moron, auxiliary metabolic gene and host takeover -1 33019 33135
YP_009269351.1 NC_030698_p50 hypothetical protein singleton unknown function unknown function -1 31790 31999
YP_009269317.1 NC_030698_p16 hypothetical protein phrog_748 head-tail connector protein connector 1 12438 12608
YP_009269333.1 NC_030698_p32 hypothetical protein phrog_4480 unknown function unknown function 1 24010 24318
YP_009269344.1 NC_030698_p43 hypothetical protein phrog_16184 unknown function unknown function -1 27684 28139
YP_009269350.1 NC_030698_p49 ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 31065 31793
YP_009269395.1 NC_030698_p94 hypothetical protein phrog_18197 unknown function unknown function -1 49928 50071
YP_009269381.1 NC_030698_p80 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 44878 45399
YP_009269336.1 NC_030698_p35 hypothetical protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 25726 25965
YP_009269379.1 NC_030698_p78 RecB-like protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43616 44467
YP_009269396.1 NC_030698_p95 hypothetical protein phrog_6351 unknown function unknown function -1 50150 50515
YP_009269393.1 NC_030698_p92 hypothetical protein phrog_13953 unknown function unknown function -1 48766 49179
YP_009269330.1 NC_030698_p29 minor tail protein phrog_404 minor tail protein tail 1 21527 21868
YP_009269346.1 NC_030698_p45 hypothetical protein phrog_762 unknown function unknown function -1 29944 30303
YP_009269309.1 NC_030698_p8 hypothetical protein phrog_356 minor tail protein tail 1 4550 5224
YP_009269374.1 NC_030698_p73 hypothetical protein phrog_13179 unknown function unknown function -1 41510 41998