Genomic map of Gordonia phage ClubL (NC_030901)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_030901
Definition
Gordonia phage ClubL, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Smoothievirus.
DB of origin
REFSEQ
Length
92618
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
179
%GC
61.91
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009273063.1 NC_030901_p20 hypothetical protein phrog_11962 unknown function unknown function 1 7460 7702
YP_009273213.1 NC_030901_p170 hypothetical protein phrog_11293 unknown function unknown function -1 88215 88697
YP_009273053.1 NC_030901_p10 hypothetical protein phrog_301 secreted protein other 1 2375 2713
YP_009273146.1 NC_030901_p103 hypothetical protein phrog_14299 unknown function unknown function 1 64312 64626
YP_009273167.1 NC_030901_p124 hypothetical protein phrog_13511 unknown function unknown function 1 72686 73018
YP_009273175.1 NC_030901_p132 hypothetical protein phrog_16561 ATPase other 1 76361 76567
YP_009273136.1 NC_030901_p93 hypothetical protein phrog_15389 unknown function unknown function 1 59587 59775
YP_009273205.1 NC_030901_p162 hypothetical protein phrog_9204 unknown function unknown function -1 86096 86281
YP_009273092.1 NC_030901_p49 hypothetical protein phrog_10433 minor tail protein tail 1 37160 37879
YP_009273159.1 NC_030901_p116 hypothetical protein phrog_15557 unknown function unknown function 1 70181 70564
YP_009273087.1 NC_030901_p44 hypothetical protein phrog_4511 unknown function unknown function 1 33234 33536
YP_009273209.1 NC_030901_p166 hypothetical protein phrog_9027 unknown function unknown function -1 87050 87265
YP_009273118.1 NC_030901_p75 integrase phrog_1 integrase integration and excision 1 50811 52109
YP_009273134.1 NC_030901_p91 HTH DNA binding domain protein phrog_66 excisionase and transcriptional regulator integration and excision 1 59132 59332
YP_009273086.1 NC_030901_p43 membrane protein phrog_565 holin lysis 1 32830 33237
YP_009273195.1 NC_030901_p152 hypothetical protein phrog_13514 unknown function unknown function -1 83759 83968
YP_009273170.1 NC_030901_p127 hypothetical protein phrog_13487 unknown function unknown function 1 73715 74077
YP_009273059.1 NC_030901_p16 hypothetical protein phrog_6944 unknown function unknown function 1 3839 4630
YP_009273098.1 NC_030901_p55 hypothetical protein phrog_15635 unknown function unknown function 1 41993 42187
YP_009273207.1 NC_030901_p164 hypothetical protein phrog_3351 unknown function unknown function -1 86626 86856
YP_009273151.1 NC_030901_p108 hypothetical protein phrog_14723 unknown function unknown function 1 66041 66286
YP_009273122.1 NC_030901_p79 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 53329 54372
YP_009273055.1 NC_030901_p12 hypothetical protein phrog_22196 unknown function unknown function 1 2874 3119
YP_009273068.1 NC_030901_p25 scaffolding protein phrog_4708 head scaffolding protein head and packaging 1 12968 13810
YP_009273179.1 NC_030901_p136 5' nucleotidase phrog_420 unknown function unknown function 1 76960 77574
YP_009273202.1 NC_030901_p159 hypothetical protein phrog_16265 unknown function unknown function -1 85455 85643
YP_009273156.1 NC_030901_p113 hypothetical protein phrog_14402 unknown function unknown function 1 67833 68198
YP_009273152.1 NC_030901_p109 hypothetical protein phrog_15012 unknown function unknown function 1 66283 66576
YP_009273164.1 NC_030901_p121 hypothetical protein phrog_15008 unknown function unknown function 1 71949 72173
YP_009273221.1 NC_030901_p178 hypothetical protein phrog_16576 unknown function unknown function -1 91873 92277
YP_009273201.1 NC_030901_p158 hypothetical protein phrog_14522 unknown function unknown function -1 85189 85458
YP_009273047.1 NC_030901_p4 hypothetical protein phrog_13839 DNA polymerase DNA, RNA and nucleotide metabolism -1 712 879
YP_009273067.1 NC_030901_p24 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 11988 12908
YP_009273158.1 NC_030901_p115 DNA primase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 68468 70099
YP_009273107.1 NC_030901_p64 hypothetical protein phrog_13648 unknown function unknown function 1 46244 46696
YP_009273216.1 NC_030901_p173 hypothetical protein phrog_10850 unknown function unknown function -1 89726 89962
YP_009273166.1 NC_030901_p123 hypothetical protein phrog_12797 unknown function unknown function 1 72436 72678
YP_009273217.1 NC_030901_p174 hypothetical protein phrog_15313 unknown function unknown function -1 90025 90372
YP_009273222.1 NC_030901_p179 hypothetical protein phrog_29750 unknown function unknown function -1 92287 92568
YP_009273075.1 NC_030901_p32 hypothetical protein phrog_123 tail terminator connector 1 16862 17326
YP_009273132.1 NC_030901_p89 hypothetical protein phrog_13452 unknown function unknown function 1 58432 58875
YP_009273135.1 NC_030901_p92 hypothetical protein phrog_8743 unknown function unknown function 1 59332 59583
YP_009273161.1 NC_030901_p118 ssB domain protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 70869 71378
YP_009273111.1 NC_030901_p68 hypothetical protein phrog_14206 unknown function unknown function 1 48801 49025
YP_009273165.1 NC_030901_p122 hypothetical protein phrog_6554 unknown function unknown function 1 72170 72439
YP_009273210.1 NC_030901_p167 hypothetical protein phrog_15104 unknown function unknown function -1 87262 87390
YP_009273124.1 NC_030901_p81 hypothetical protein phrog_16364 unknown function unknown function 1 54728 55009
YP_009273085.1 NC_030901_p42 lysin A phrog_1512 endolysin lysis 1 31897 32823
YP_009273103.1 NC_030901_p60 hypothetical protein phrog_14204 unknown function unknown function 1 43946 44662
YP_009273073.1 NC_030901_p30 hypothetical protein phrog_501 head closure Hc1 connector 1 16065 16418
YP_009273109.1 NC_030901_p66 hypothetical protein phrog_1843 unknown function unknown function 1 47935 48603
YP_009273145.1 NC_030901_p102 hypothetical protein phrog_13552 unknown function unknown function 1 64014 64319
YP_009273076.1 NC_030901_p33 EndoVII phrog_2633 endonuclease VII DNA, RNA and nucleotide metabolism 1 17326 17784
YP_009273130.1 NC_030901_p87 hypothetical protein phrog_15274 unknown function unknown function 1 57315 57548
YP_009273089.1 NC_030901_p46 hypothetical protein phrog_3798 unknown function unknown function 1 33748 34203
YP_009273052.1 NC_030901_p9 hypothetical protein phrog_12377 unknown function unknown function 1 2084 2368
YP_009273061.1 NC_030901_p18 hypothetical protein phrog_8206 unknown function unknown function 1 4917 5387
YP_009273049.1 NC_030901_p6 hypothetical protein phrog_15859 unknown function unknown function -1 1247 1513
YP_009273054.1 NC_030901_p11 hypothetical protein phrog_15810 unknown function unknown function 1 2710 2877
YP_009273138.1 NC_030901_p95 HTH DNA binding domain protein phrog_1590 unknown function unknown function 1 60032 61168
YP_009273060.1 NC_030901_p17 hypothetical protein phrog_16046 unknown function unknown function 1 4630 4920
YP_009273194.1 NC_030901_p151 hypothetical protein phrog_15457 unknown function unknown function -1 83593 83775
YP_009273066.1 NC_030901_p23 portal protein phrog_104 portal protein head and packaging 1 10375 11991
YP_009273203.1 NC_030901_p160 hypothetical protein phrog_13323 unknown function unknown function -1 85649 85765
YP_009273046.1 NC_030901_p3 hypothetical protein phrog_14795 unknown function unknown function -1 545 715
YP_009273191.1 NC_030901_p148 hypothetical protein phrog_13635 unknown function unknown function -1 82589 82930
YP_009273198.1 NC_030901_p155 hypothetical protein phrog_18847 unknown function unknown function -1 84398 84778
YP_009273149.1 NC_030901_p106 hypothetical protein phrog_16055 unknown function unknown function 1 65486 65734
YP_009273206.1 NC_030901_p163 hypothetical protein phrog_14095 unknown function unknown function -1 86292 86528
YP_009273143.1 NC_030901_p100 hypothetical protein phrog_17161 unknown function unknown function 1 63365 63709
YP_009273100.1 NC_030901_p57 exodeoxyribonuclease VII small subunit phrog_13423 exonuclease DNA, RNA and nucleotide metabolism 1 43370 43564
YP_009273186.1 NC_030901_p143 hypothetical protein phrog_16413 unknown function unknown function 1 81025 81357
YP_009273169.1 NC_030901_p126 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism 1 73245 73709
YP_009273057.1 NC_030901_p14 HNH homing endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 3280 3588
YP_009273090.1 NC_030901_p47 minor tail protein phrog_4120 minor tail protein tail 1 34203 35285
YP_009273147.1 NC_030901_p104 hypothetical protein phrog_12889 unknown function unknown function 1 64679 65068
YP_009273116.1 NC_030901_p73 hypothetical protein phrog_15957 unknown function unknown function 1 49845 50147
YP_009273114.1 NC_030901_p71 hypothetical protein phrog_14684 unknown function unknown function 1 49487 49660
YP_009273113.1 NC_030901_p70 hypothetical protein phrog_7382 unknown function unknown function 1 49243 49494
YP_009273140.1 NC_030901_p97 hypothetical protein phrog_10563 unknown function unknown function 1 62155 62691
YP_009273200.1 NC_030901_p157 hypothetical protein phrog_14253 unknown function unknown function -1 84929 85189
YP_009273104.1 NC_030901_p61 hypothetical protein phrog_14021 unknown function unknown function 1 44754 44963
YP_009273157.1 NC_030901_p114 hypothetical protein phrog_14227 unknown function unknown function 1 68195 68467
YP_009273127.1 NC_030901_p84 hypothetical protein phrog_24965 unknown function unknown function 1 56245 56454
YP_009273099.1 NC_030901_p56 exodeoxyribonuclease VII large subunit phrog_9454 exonuclease DNA, RNA and nucleotide metabolism 1 42184 43350
YP_009273154.1 NC_030901_p111 hypothetical protein phrog_289 GTP-binding domain other 1 67337 67714
YP_009273071.1 NC_030901_p28 hypothetical protein phrog_15846 unknown function unknown function 1 15359 15685
YP_009273173.1 NC_030901_p130 hypothetical protein phrog_14081 unknown function unknown function 1 75416 75733
YP_009273188.1 NC_030901_p145 hypothetical protein phrog_12823 unknown function unknown function -1 81673 82026
YP_009273072.1 NC_030901_p29 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 15685 16065
YP_009273187.1 NC_030901_p144 hypothetical protein phrog_11980 unknown function unknown function -1 81341 81673
YP_009273192.1 NC_030901_p149 hypothetical protein phrog_1173 unknown function unknown function -1 82927 83085
YP_009273093.1 NC_030901_p50 minor tail protein phrog_13892 minor tail protein tail 1 37879 39180
YP_009273088.1 NC_030901_p45 hypothetical protein phrog_6071 unknown function unknown function 1 33533 33751
YP_009273045.1 NC_030901_p2 hypothetical protein phrog_7155 unknown function unknown function -1 333 548
YP_009273097.1 NC_030901_p54 hypothetical protein phrog_13269 unknown function unknown function -1 41169 41615
YP_009273215.1 NC_030901_p172 hypothetical protein phrog_11344 unknown function unknown function -1 88816 89637
YP_009273080.1 NC_030901_p37 tail assembly chaperone phrog_11681 tail assembly chaperone tail 1 18849 19298
YP_009273058.1 NC_030901_p15 hypothetical protein phrog_16096 unknown function unknown function 1 3606 3839
YP_009273125.1 NC_030901_p82 hypothetical protein phrog_13065 unknown function unknown function 1 55006 55530
YP_009273197.1 NC_030901_p154 hypothetical protein phrog_16550 unknown function unknown function -1 84222 84401
YP_009273196.1 NC_030901_p153 hypothetical protein phrog_12664 unknown function unknown function -1 83968 84225
YP_009273051.1 NC_030901_p8 hypothetical protein phrog_17172 unknown function unknown function -1 1776 2003
YP_009273176.1 NC_030901_p133 hypothetical protein phrog_15267 DNA helicase DNA, RNA and nucleotide metabolism 1 76564 76764
YP_009273172.1 NC_030901_p129 nucleotidyltransferase phrog_388 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 74712 75419
YP_009273160.1 NC_030901_p117 NrdH-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 70565 70858
YP_009273129.1 NC_030901_p86 FAD-dependent thymidylate synthetase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 56617 57318
YP_009273062.1 NC_030901_p19 hypothetical protein phrog_8206 unknown function unknown function 1 5384 5827
YP_009273133.1 NC_030901_p90 hypothetical protein phrog_13104 unknown function unknown function 1 58872 59135
YP_009273050.1 NC_030901_p7 hypothetical protein phrog_4392 unknown function unknown function -1 1510 1779
YP_009273183.1 NC_030901_p140 hypothetical protein phrog_6187 unknown function unknown function 1 79372 79995
YP_009273142.1 NC_030901_p99 MazG-like protein phrog_229 MazG-like pyrophosphatase other 1 63030 63368
YP_009273121.1 NC_030901_p78 hypothetical protein phrog_16610 unknown function unknown function 1 53168 53332
YP_009273095.1 NC_030901_p52 hypothetical protein phrog_9930 unknown function unknown function 1 39910 40839
YP_009273141.1 NC_030901_p98 hypothetical protein phrog_14521 unknown function unknown function 1 62691 63026
YP_009273096.1 NC_030901_p53 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 40841 41176
YP_009273105.1 NC_030901_p62 phosphoesterase phrog_547 phosphoesterase other 1 44960 45727
YP_009273069.1 NC_030901_p26 head decoration protein phrog_3583 head decoration head and packaging 1 13823 14221
YP_009273177.1 NC_030901_p134 hypothetical protein phrog_19780 unknown function unknown function 1 76761 76856
YP_009273110.1 NC_030901_p67 hypothetical protein phrog_11725 unknown function unknown function 1 48610 48804
YP_009273131.1 NC_030901_p88 hypothetical protein phrog_14230 unknown function unknown function 1 57545 58435
YP_009273064.1 NC_030901_p21 hypothetical protein phrog_226 minor tail protein tail 1 8141 8614
YP_009273074.1 NC_030901_p31 hypothetical protein phrog_5210 neck protein connector 1 16422 16865
YP_009273108.1 NC_030901_p65 RtcB-like protein phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 46718 47935
YP_009273193.1 NC_030901_p150 hypothetical protein phrog_11149 unknown function unknown function -1 83072 83596
YP_009273199.1 NC_030901_p156 hypothetical protein phrog_11957 unknown function unknown function -1 84780 84926
YP_009273101.1 NC_030901_p58 hypothetical protein phrog_11909 unknown function unknown function 1 43564 43716
YP_009273181.1 NC_030901_p138 hypothetical protein phrog_10900 unknown function unknown function 1 78717 79028
YP_009273091.1 NC_030901_p48 minor tail protein phrog_2689 minor tail protein tail 1 35318 37150
YP_009273112.1 NC_030901_p69 hypothetical protein phrog_8575 unknown function unknown function 1 49022 49246
YP_009273184.1 NC_030901_p141 HNH endonuclease phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 79995 80744
YP_009273094.1 NC_030901_p51 hypothetical protein singleton unknown function unknown function 1 39347 39910
YP_009273077.1 NC_030901_p34 major tail protein phrog_476 major tail protein tail 1 17833 18498
YP_009273081.1 NC_030901_p38 tapemeasure protein phrog_7025 tail length tape measure protein tail 1 19833 28628
YP_009273128.1 NC_030901_p85 hypothetical protein phrog_29487 unknown function unknown function 1 56447 56620
YP_009273204.1 NC_030901_p161 hypothetical protein phrog_7172 unknown function unknown function -1 85843 86094
YP_009273171.1 NC_030901_p128 hypothetical protein phrog_11731 unknown function unknown function 1 74078 74695
YP_009273214.1 NC_030901_p171 hypothetical protein phrog_10987 unknown function unknown function -1 88699 88806
YP_009273115.1 NC_030901_p72 hypothetical protein phrog_15512 unknown function unknown function 1 49657 49848
YP_009273120.1 NC_030901_p77 immunity repressor phrog_13730 transcriptional repressor transcription regulation -1 52587 52988
YP_009273220.1 NC_030901_p177 hypothetical protein phrog_9377 unknown function unknown function -1 91577 91753
YP_009273126.1 NC_030901_p83 RecT-like protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 55523 56248
YP_009273084.1 NC_030901_p41 lysin A phrog_6007 endolysin lysis 1 31259 31900
YP_009273162.1 NC_030901_p119 hypothetical protein phrog_14134 unknown function unknown function 1 71382 71663
YP_009273163.1 NC_030901_p120 hypothetical protein phrog_10802 transcriptional regulator WhiB-like transcription regulation 1 71668 71952
YP_009273082.1 NC_030901_p39 minor tail protein phrog_106 minor tail protein tail 1 28631 29512
YP_009273178.1 NC_030901_p135 hypothetical protein phrog_19755 helicase DNA, RNA and nucleotide metabolism 1 76829 76963
YP_009273106.1 NC_030901_p63 hypothetical protein phrog_8077 unknown function unknown function 1 45724 46236
YP_009273079.1 NC_030901_p36 tail assembly chaperone phrog_2624 tail assembly chaperone tail 1 18849 19810
YP_009273219.1 NC_030901_p176 hypothetical protein phrog_14511 unknown function unknown function -1 90803 91336
YP_009273102.1 NC_030901_p59 hypothetical protein phrog_13939 unknown function unknown function 1 43713 43949
YP_009273208.1 NC_030901_p165 hypothetical protein phrog_14483 unknown function unknown function -1 86853 87053
YP_009273174.1 NC_030901_p131 hypothetical protein phrog_8313 unknown function unknown function 1 75735 76364
YP_009273182.1 NC_030901_p139 hypothetical protein phrog_11181 unknown function unknown function 1 79087 79284
YP_009273185.1 NC_030901_p142 hypothetical protein phrog_1042 unknown function unknown function 1 80767 80985
YP_009273044.1 NC_030901_p1 hypothetical protein phrog_16285 unknown function unknown function -1 37 336
YP_009273150.1 NC_030901_p107 hypothetical protein phrog_13683 unknown function unknown function 1 65734 66048
YP_009273144.1 NC_030901_p101 hypothetical protein phrog_14196 phosphohydrolase other 1 63706 64017
YP_009273070.1 NC_030901_p27 capsid protein phrog_29 major head protein head and packaging 1 14258 15286
YP_009273119.1 NC_030901_p76 hypothetical protein phrog_15171 unknown function unknown function 1 52352 52552
YP_009273155.1 NC_030901_p112 hypothetical protein phrog_15980 unknown function unknown function 1 67714 67836
YP_009273083.1 NC_030901_p40 minor tail protein phrog_110 minor tail protein tail 1 29531 31222
YP_009273065.1 NC_030901_p22 terminase phrog_9 terminase large subunit head and packaging 1 8614 10362
YP_009273117.1 NC_030901_p74 hypothetical protein phrog_14817 unknown function unknown function 1 50144 50317
YP_009273148.1 NC_030901_p105 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 65085 65489
YP_009273211.1 NC_030901_p168 hypothetical protein phrog_3842 unknown function unknown function -1 87387 88010
YP_009273137.1 NC_030901_p94 hypothetical protein phrog_11291 unknown function unknown function 1 59803 59970
YP_009273212.1 NC_030901_p169 hypothetical protein phrog_16153 unknown function unknown function -1 88039 88218
YP_009273189.1 NC_030901_p146 hypothetical protein phrog_15818 unknown function unknown function -1 82087 82428
YP_009273218.1 NC_030901_p175 hypothetical protein phrog_9377 unknown function unknown function -1 90400 90576
YP_009273180.1 NC_030901_p137 hypothetical protein phrog_16254 unknown function unknown function 1 77571 78704
YP_009273190.1 NC_030901_p147 hypothetical protein phrog_18459 unknown function unknown function -1 82410 82592
YP_009273123.1 NC_030901_p80 hypothetical protein phrog_35572 unknown function unknown function 1 54580 54738
YP_009273168.1 NC_030901_p125 hypothetical protein phrog_15025 unknown function unknown function 1 73022 73264
YP_009273056.1 NC_030901_p13 hypothetical protein phrog_16133 HNH endonuclease DNA, RNA and nucleotide metabolism 1 3116 3283
YP_009273139.1 NC_030901_p96 hypothetical protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 61169 62158
YP_009273048.1 NC_030901_p5 hypothetical protein phrog_15018 unknown function unknown function -1 876 1250
YP_009273078.1 NC_030901_p35 hypothetical protein phrog_14494 unknown function unknown function 1 18612 18815
YP_009273153.1 NC_030901_p110 toxic cation resistance protein phrog_5359 unknown function unknown function 1 66573 67340