Genomic map of Pseudomonas phage JBD69 (NC_030908)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_030908
Definition
Pseudomonas phage JBD69, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
DB of origin
REFSEQ
Length
36938
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
63.93
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009273651.1 NC_030908_p26 hypothetical protein phrog_36351 unknown function unknown function 1 11866 11985
YP_009273634.1 NC_030908_p9 hypothetical protein phrog_3765 unknown function unknown function 1 6014 6130
YP_009273627.1 NC_030908_p2 DNA-binding protein phrog_769 transcriptional repressor transcription regulation 1 1042 1386
YP_009273671.1 NC_030908_p46 hypothetical protein phrog_1442 tail assembly chaperone tail 1 23956 24432
YP_009273630.1 NC_030908_p5 hypothetical protein phrog_4468 unknown function unknown function 1 2146 2556
YP_009273655.1 NC_030908_p30 DNA-binding protein phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 1 12690 13190
YP_009273667.1 NC_030908_p42 hypothetical protein phrog_195 head-tail adaptor connector 1 22078 22494
YP_009273642.1 NC_030908_p17 hypothetical protein phrog_3223 unknown function unknown function 1 8519 8710
YP_009273646.1 NC_030908_p21 hypothetical protein phrog_286 unknown function unknown function 1 9742 10143
YP_009273679.1 NC_030908_p54 hypothetical protein phrog_1101 tail protein tail 1 32913 35120
YP_009273680.1 NC_030908_p55 hypothetical protein phrog_2875 virion structural protein head and packaging 1 35117 36268
YP_009273647.1 NC_030908_p22 integral membrane protein phrog_836 late transcriptional activator transcription regulation 1 10136 10585
YP_009273674.1 NC_030908_p49 hypothetical protein phrog_687 structural protein head and packaging 1 29023 29946
YP_009273628.1 NC_030908_p3 hypothetical protein phrog_2345 transcriptional regulator transcription regulation 1 1389 1823
YP_009273675.1 NC_030908_p50 hypothetical protein phrog_1082 tail assembly protein tail 1 29946 31649
YP_009273656.1 NC_030908_p31 hypothetical protein phrog_1244 unknown function unknown function -1 13196 13690
YP_009273670.1 NC_030908_p45 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 23164 23934
YP_009273631.1 NC_030908_p6 transposase phrog_310 transposase integration and excision 1 2549 4621
YP_009273645.1 NC_030908_p20 hypothetical protein phrog_3273 unknown function unknown function 1 9524 9745
YP_009273673.1 NC_030908_p48 hypothetical protein phrog_687 structural protein head and packaging 1 28065 29021
YP_009273668.1 NC_030908_p43 hypothetical protein phrog_209 portal protein head and packaging 1 22491 22964
YP_009273665.1 NC_030908_p40 hypothetical protein phrog_4833 unknown function unknown function 1 21573 21914
YP_009273635.1 NC_030908_p10 hypothetical protein phrog_2119 unknown function unknown function 1 6130 6543
YP_009273658.1 NC_030908_p33 portal protein phrog_113 portal protein head and packaging 1 15384 16964
YP_009273641.1 NC_030908_p16 hypothetical protein phrog_1518 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 8236 8517
YP_009273678.1 NC_030908_p53 hypothetical protein phrog_1196 tail assembly chaperone tail 1 32705 32923
YP_009273652.1 NC_030908_p27 hypothetical protein phrog_2975 Rz-like spanin lysis 1 11982 12383
YP_009273676.1 NC_030908_p51 hypothetical protein phrog_778 tail assembly protein tail 1 31639 32460
YP_009273682.1 NC_030908_p57 hypothetical protein phrog_2623 unknown function unknown function 1 36626 36850
YP_009273672.1 NC_030908_p47 tail length tape-measure protein phrog_2335 tail length tape measure protein tail 1 24581 28057
YP_009273650.1 NC_030908_p25 capsid and scaffold protein phrog_873 endolysin head and packaging 1 11450 11866
YP_009273649.1 NC_030908_p24 hypothetical protein phrog_1024 unknown function unknown function 1 11028 11450
YP_009273677.1 NC_030908_p52 hypothetical protein phrog_1180 tail assembly chaperone tail 1 32469 32708
YP_009273681.1 NC_030908_p56 hypothetical protein phrog_2432 unknown function unknown function 1 36271 36552
YP_009273659.1 NC_030908_p34 virion morphogenesis protein phrog_220 minor head protein and DNA pilot head and packaging 1 16964 18250
YP_009273660.1 NC_030908_p35 capsid and scaffold protein phrog_26 tail completion or Neck1 protein connector 1 18250 18717
YP_009273654.1 NC_030908_p29 hypothetical protein phrog_1103 unknown function unknown function 1 12494 12682
YP_009273629.1 NC_030908_p4 hypothetical protein phrog_8647 unknown function unknown function 1 1823 2149
YP_009273637.1 NC_030908_p12 host-nuclease inhibitor protein phrog_491 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 6834 7352
YP_009273636.1 NC_030908_p11 hypothetical protein phrog_2043 unknown function unknown function 1 6506 6817
YP_009273633.1 NC_030908_p8 hypothetical protein phrog_2030 transcriptional regulator transcription regulation 1 5382 6029
YP_009273648.1 NC_030908_p23 hypothetical protein phrog_3648 unknown function unknown function 1 10688 11035
YP_009273643.1 NC_030908_p18 hypothetical protein phrog_5249 unknown function unknown function 1 8710 9159
YP_009273626.1 NC_030908_p1 c repressor phrog_4 transcriptional repressor transcription regulation -1 170 892
YP_009273666.1 NC_030908_p41 hypothetical protein phrog_3376 unknown function unknown function 1 21914 22081
YP_009273662.1 NC_030908_p37 hypothetical protein phrog_3865 unknown function unknown function 1 19036 19275
YP_009273664.1 NC_030908_p39 major capsid protein phrog_371 major head protein head and packaging 1 20592 21506
YP_009273639.1 NC_030908_p14 host nuclease inhibitor protein phrog_1518 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 7733 8011
YP_009273663.1 NC_030908_p38 protease (I) and scaffold (Z) protein phrog_328 head maturation protease head and packaging 1 19491 20588
YP_009273653.1 NC_030908_p28 hypothetical protein phrog_8661 unknown function unknown function 1 12376 12489
YP_009273669.1 NC_030908_p44 hypothetical protein phrog_3129 unknown function unknown function 1 22952 23131
YP_009273638.1 NC_030908_p13 host nuclease inhibitor protein phrog_6755 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 7354 7731
YP_009273661.1 NC_030908_p36 hypothetical protein phrog_20331 unknown function unknown function 1 18828 19064
YP_009273644.1 NC_030908_p19 hypothetical protein phrog_3652 unknown function unknown function 1 9168 9437
YP_009273632.1 NC_030908_p7 DNA transposition protein phrog_296 DNA transposition protein integration and excision 1 4636 5385
YP_009273657.1 NC_030908_p32 hypothetical protein phrog_38 terminase large subunit head and packaging 1 13722 15374
YP_009273640.1 NC_030908_p15 hypothetical protein phrog_7895 unknown function unknown function 1 8013 8234