Genomic map of Pseudomonas phage YMC11/07/P54_PAE_BP (NC_030909)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_030909
Definition
Pseudomonas phage YMC11/07/P54_PAE_BP, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
50183
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
73
%GC
62.18
Number of singletons
3
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009273755.1 NC_030909_p73 protein of an unannotated phage phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 48380 50122
YP_009273710.1 NC_030909_p28 protein of an unannotated phage phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 23130 23615
YP_009273723.1 NC_030909_p41 protein of an unannotated phage phrog_198 holin lysis -1 31981 32370
YP_009273724.1 NC_030909_p42 protein of an unannotated phage phrog_3373 unknown function unknown function -1 32485 33354
YP_009273692.1 NC_030909_p10 protein of an unannotated phage phrog_4029 unknown function unknown function 1 6727 7275
YP_009273709.1 NC_030909_p27 protein of an unannotated phage phrog_5 tail completion or Neck1 protein connector -1 22668 23030
YP_009273690.1 NC_030909_p8 protein of an unannotated phage phrog_343 unknown function unknown function 1 6254 6526
YP_009273687.1 NC_030909_p5 protein of an unannotated phage phrog_11137 unknown function unknown function 1 5462 5632
YP_009273752.1 NC_030909_p70 protein of an unannotated phage phrog_561 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 46300 47226
YP_009273742.1 NC_030909_p60 protein of an unannotated phage phrog_14855 unknown function unknown function 1 42161 42700
YP_009273696.1 NC_030909_p14 protein of an unannotated phage singleton unknown function unknown function -1 9753 9878
YP_009273719.1 NC_030909_p37 protein of an unannotated phage phrog_10752 unknown function unknown function -1 29719 29916
YP_009273737.1 NC_030909_p55 protein of an unannotated phage phrog_2707 unknown function unknown function -1 39949 40263
YP_009273712.1 NC_030909_p30 protein of an unannotated phage phrog_786 unknown function unknown function -1 23929 24330
YP_009273748.1 NC_030909_p66 protein of an unannotated phage phrog_5864 unknown function unknown function 1 44664 44801
YP_009273693.1 NC_030909_p11 protein of an unannotated phage phrog_16138 unknown function unknown function 1 7325 8248
YP_009273741.1 NC_030909_p59 protein of an unannotated phage phrog_9037 unknown function unknown function 1 41856 42119
YP_009273691.1 NC_030909_p9 protein of an unannotated phage phrog_2440 transcriptional regulator transcription regulation 1 6527 6730
YP_009273743.1 NC_030909_p61 protein of an unannotated phage phrog_5527 transcriptional regulator transcription regulation 1 42757 43128
YP_009273736.1 NC_030909_p54 protein of an unannotated phage phrog_6136 unknown function unknown function 1 39632 39856
YP_009273708.1 NC_030909_p26 protein of an unannotated phage phrog_782 unknown function unknown function -1 22297 22671
YP_009273713.1 NC_030909_p31 protein of an unannotated phage phrog_2138 unknown function unknown function -1 24415 24606
YP_009273697.1 NC_030909_p15 protein of an unannotated phage phrog_23559 unknown function unknown function -1 9973 10212
YP_009273740.1 NC_030909_p58 protein of an unannotated phage phrog_24301 unknown function unknown function 1 41702 41839
YP_009273703.1 NC_030909_p21 protein of an unannotated phage phrog_396 minor tail protein tail -1 17233 17724
YP_009273722.1 NC_030909_p40 protein of an unannotated phage phrog_217 holin lysis -1 31704 31988
YP_009273698.1 NC_030909_p16 protein of an unannotated phage phrog_130 anti-repressor Ant transcription regulation 1 11005 11736
YP_009273686.1 NC_030909_p4 protein of an unannotated phage phrog_28019 unknown function unknown function 1 5189 5356
YP_009273731.1 NC_030909_p49 protein of an unannotated phage phrog_3983 unknown function unknown function 1 37128 37640
YP_009273695.1 NC_030909_p13 protein of an unannotated phage phrog_7 endolysin lysis -1 9208 9642
YP_009273720.1 NC_030909_p38 protein of an unannotated phage phrog_2 terminase large subunit head and packaging -1 29916 31169
YP_009273734.1 NC_030909_p52 protein of an unannotated phage phrog_3135 unknown function unknown function 1 38967 39281
YP_009273700.1 NC_030909_p18 protein of an unannotated phage phrog_32929 unknown function unknown function -1 12002 14059
YP_009273733.1 NC_030909_p51 protein of an unannotated phage phrog_8558 unknown function unknown function 1 38638 38889
YP_009273750.1 NC_030909_p68 protein of an unannotated phage phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 45276 46079
YP_009273728.1 NC_030909_p46 protein of an unannotated phage singleton unknown function unknown function -1 36020 36202
YP_009273694.1 NC_030909_p12 protein of an unannotated phage phrog_13 Rz-like spanin lysis -1 8591 9043
YP_009273738.1 NC_030909_p56 protein of an unannotated phage phrog_2707 unknown function unknown function 1 40357 40596
YP_009273701.1 NC_030909_p19 protein of an unannotated phage phrog_469 tail protein tail -1 14120 16849
YP_009273704.1 NC_030909_p22 protein of an unannotated phage phrog_384 virion structural protein head and packaging -1 17708 18106
YP_009273726.1 NC_030909_p44 protein of an unannotated phage phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 33819 35234
YP_009273717.1 NC_030909_p35 protein of an unannotated phage phrog_758 head morphogenesis head and packaging -1 27460 28311
YP_009273702.1 NC_030909_p20 protein of an unannotated phage phrog_329 minor tail protein tail -1 16821 17228
YP_009273684.1 NC_030909_p2 protein of an unannotated phage phrog_116 DNA methyltransferase other 1 2662 4752
YP_009273754.1 NC_030909_p72 protein of an unannotated phage phrog_6576 unknown function unknown function 1 47444 48376
YP_009273747.1 NC_030909_p65 protein of an unannotated phage phrog_6457 unknown function unknown function 1 44489 44680
YP_009273745.1 NC_030909_p63 protein of an unannotated phage phrog_6125 unknown function unknown function 1 44135 44287
YP_009273715.1 NC_030909_p33 protein of an unannotated phage phrog_766 head decoration head and packaging -1 25726 26175
YP_009273732.1 NC_030909_p50 protein of an unannotated phage phrog_3 transcriptional repressor transcription regulation -1 37899 38141
YP_009273699.1 NC_030909_p17 protein of an unannotated phage singleton unknown function unknown function 1 11739 11864
YP_009273721.1 NC_030909_p39 protein of an unannotated phage phrog_51 terminase small subunit head and packaging -1 31153 31695
YP_009273725.1 NC_030909_p43 protein of an unannotated phage phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 33383 33826
YP_009273683.1 NC_030909_p1 protein of an unannotated phage phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 35 2665
YP_009273711.1 NC_030909_p29 protein of an unannotated phage phrog_797 unknown function unknown function -1 23612 23932
YP_009273705.1 NC_030909_p23 protein of an unannotated phage phrog_1107 tail length tape measure protein tail -1 18172 20673
YP_009273716.1 NC_030909_p34 protein of an unannotated phage phrog_760 unknown function unknown function -1 26179 27456
YP_009273727.1 NC_030909_p45 protein of an unannotated phage phrog_10469 DnaD-like helicase loader DNA, RNA and nucleotide metabolism -1 35227 36027
YP_009273746.1 NC_030909_p64 protein of an unannotated phage phrog_6033 unknown function unknown function 1 44271 44492
YP_009273749.1 NC_030909_p67 protein of an unannotated phage phrog_25114 unknown function unknown function 1 44809 45279
YP_009273689.1 NC_030909_p7 protein of an unannotated phage phrog_5614 unknown function unknown function 1 5766 6251
YP_009273688.1 NC_030909_p6 protein of an unannotated phage phrog_5315 unknown function unknown function 1 5635 5781
YP_009273744.1 NC_030909_p62 protein of an unannotated phage phrog_1934 unknown function unknown function 1 43605 44135
YP_009273730.1 NC_030909_p48 protein of an unannotated phage phrog_163 CII-like transcriptional activator transcription regulation -1 36473 37045
YP_009273729.1 NC_030909_p47 protein of an unannotated phage phrog_6111 unknown function unknown function -1 36189 36470
YP_009273753.1 NC_030909_p71 protein of an unannotated phage phrog_7521 unknown function unknown function 1 47233 47433
YP_009273685.1 NC_030909_p3 protein of an unannotated phage phrog_3190 unknown function unknown function 1 4749 5192
YP_009273718.1 NC_030909_p36 protein of an unannotated phage phrog_146 portal protein head and packaging -1 28346 29716
YP_009273735.1 NC_030909_p53 protein of an unannotated phage phrog_17996 unknown function unknown function 1 39298 39540
YP_009273706.1 NC_030909_p24 protein of an unannotated phage phrog_791 unknown function unknown function -1 20673 21290
YP_009273707.1 NC_030909_p25 protein of an unannotated phage phrog_853 major tail protein tail -1 21287 22282
YP_009273714.1 NC_030909_p32 protein of an unannotated phage phrog_771 virion structural protein head and packaging -1 24616 25710
YP_009273751.1 NC_030909_p69 protein of an unannotated phage phrog_16104 unknown function unknown function 1 46088 46303
YP_009273739.1 NC_030909_p57 protein of an unannotated phage phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41128 41685