Genomic map of Gordonia phage Vendetta (NC_030911)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_030911
Definition
Gordonia phage Vendetta, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vendettavirus.
DB of origin
REFSEQ
Length
45858
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
66.13
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009274007.1 NC_030911_p74 hypothetical protein phrog_23757 unknown function unknown function 1 44266 44406
YP_009273961.1 NC_030911_p28 hypothetical protein phrog_2804 virion structural protein head and packaging 1 21978 22613
YP_009273959.1 NC_030911_p26 minor tail protein phrog_4120 minor tail protein tail 1 19531 20649
YP_009274000.1 NC_030911_p67 hypothetical protein phrog_22856 unknown function unknown function 1 42114 42470
YP_009273966.1 NC_030911_p33 hypothetical protein phrog_15500 unknown function unknown function 1 25311 26063
YP_009273943.1 NC_030911_p10 major capsid protein phrog_10 major head protein head and packaging 1 7211 8500
YP_009274008.1 NC_030911_p75 hypothetical protein phrog_22893 unknown function unknown function 1 44403 44582
YP_009273938.1 NC_030911_p5 esterase phrog_6187 unknown function unknown function 1 2388 3029
YP_009273958.1 NC_030911_p25 hypothetical protein phrog_19139 unknown function unknown function 1 19079 19534
YP_009273979.1 NC_030911_p46 hypothetical protein phrog_23389 unknown function unknown function 1 31901 32044
YP_009273988.1 NC_030911_p55 hypothetical protein phrog_29430 unknown function unknown function 1 37841 38158
YP_009273998.1 NC_030911_p65 endonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 40804 41925
YP_009273982.1 NC_030911_p49 hypothetical protein phrog_19039 unknown function unknown function 1 33181 33618
YP_009273955.1 NC_030911_p22 minor tail protein phrog_110 minor tail protein tail 1 16480 17808
YP_009273986.1 NC_030911_p53 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 36171 36677
YP_009273999.1 NC_030911_p66 hypothetical protein phrog_19391 unknown function unknown function 1 41932 42117
YP_009273951.1 NC_030911_p18 tail assembly chaperone phrog_8183 tail assembly chaperone tail 1 11432 12153
YP_009273940.1 NC_030911_p7 terminase phrog_9 terminase large subunit head and packaging 1 3467 5074
YP_009273960.1 NC_030911_p27 minor tail protein phrog_23595 minor tail protein tail 1 20652 21974
YP_009273948.1 NC_030911_p15 hypothetical protein phrog_19684 unknown function unknown function 1 10039 10251
YP_009273946.1 NC_030911_p13 head-to-tail connector protein phrog_501 head closure Hc1 connector 1 9406 9765
YP_009273953.1 NC_030911_p20 tape measure protein phrog_4197 tail length tape measure protein tail 1 12184 15645
YP_009273981.1 NC_030911_p48 hypothetical protein phrog_1389 unknown function unknown function 1 32705 33184
YP_009273985.1 NC_030911_p52 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 34815 36152
YP_009273983.1 NC_030911_p50 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 33608 33991
YP_009273949.1 NC_030911_p16 head-to-tail connector protein phrog_123 tail terminator connector 1 10244 10612
YP_009273977.1 NC_030911_p44 exonuclease phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 30865 31821
YP_009273969.1 NC_030911_p36 integrase phrog_1 integrase integration and excision -1 26850 27965
YP_009273968.1 NC_030911_p35 hypothetical protein phrog_27085 unknown function unknown function 1 26564 26785
YP_009273992.1 NC_030911_p59 hypothetical protein phrog_19974 unknown function unknown function 1 38956 39450
YP_009273937.1 NC_030911_p4 hypothetical protein phrog_37598 unknown function unknown function 1 1818 2309
YP_009273956.1 NC_030911_p23 lysin A phrog_2998 endolysin lysis 1 17824 18855
YP_009273947.1 NC_030911_p14 head-to-tail connector protein phrog_5837 head closure Hc1 connector 1 9762 10034
YP_009273957.1 NC_030911_p24 membrane protein phrog_25227 membrane protein moron, auxiliary metabolic gene and host takeover 1 18843 19082
YP_009273974.1 NC_030911_p41 hypothetical protein phrog_20128 unknown function unknown function 1 29768 30457
YP_009273976.1 NC_030911_p43 hypothetical protein phrog_22062 unknown function unknown function 1 30702 30815
YP_009273991.1 NC_030911_p58 hypothetical protein phrog_25844 unknown function unknown function 1 38763 38969
YP_009274004.1 NC_030911_p71 hypothetical protein phrog_474 phosphofructokinase other 1 43380 43769
YP_009273935.1 NC_030911_p2 hypothetical protein phrog_27811 unknown function unknown function -1 1004 1210
YP_009273975.1 NC_030911_p42 hypothetical protein phrog_19376 unknown function unknown function 1 30454 30705
YP_009274010.1 NC_030911_p77 hypothetical protein phrog_29082 unknown function unknown function 1 44694 44840
YP_009273980.1 NC_030911_p47 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32041 32718
YP_009273973.1 NC_030911_p40 DNA binding protein phrog_66 excisionase and transcriptional regulator integration and excision 1 29478 29651
YP_009273987.1 NC_030911_p54 hypothetical protein phrog_27573 unknown function unknown function 1 36729 37751
YP_009273950.1 NC_030911_p17 major tail protein phrog_117 major tail protein tail 1 10694 11284
YP_009274002.1 NC_030911_p69 CMP glycosidase phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 42908 43234
YP_009273962.1 NC_030911_p29 hypothetical protein phrog_7719 minor tail protein tail 1 22610 23578
YP_009273967.1 NC_030911_p34 hypothetical protein phrog_2974 unknown function unknown function 1 26196 26471
YP_009273942.1 NC_030911_p9 capsid maturation protease phrog_80 head maturation protease head and packaging 1 6360 7160
YP_009274001.1 NC_030911_p68 hypothetical protein phrog_2596 unknown function unknown function 1 42588 42908
YP_009273965.1 NC_030911_p32 hypothetical protein phrog_34122 unknown function unknown function -1 24779 24925
YP_009274006.1 NC_030911_p73 hypothetical protein phrog_26232 unknown function unknown function 1 44010 44276
YP_009273934.1 NC_030911_p1 esterase phrog_30911 unknown function unknown function -1 135 1007
YP_009273997.1 NC_030911_p64 hypothetical protein phrog_1738 unknown function unknown function 1 40605 40796
YP_009273990.1 NC_030911_p57 hypothetical protein phrog_20343 unknown function unknown function 1 38581 38766
YP_009273994.1 NC_030911_p61 hypothetical protein phrog_20479 unknown function unknown function 1 39721 40083
YP_009273993.1 NC_030911_p60 DNA binding domain protein phrog_20602 DNA binding protein DNA, RNA and nucleotide metabolism 1 39464 39724
YP_009274009.1 NC_030911_p76 hypothetical protein phrog_26579 unknown function unknown function 1 44579 44692
YP_009273996.1 NC_030911_p63 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40315 40611
YP_009273963.1 NC_030911_p30 hypothetical protein phrog_22340 lipoprotein other -1 23637 24095
YP_009273944.1 NC_030911_p11 hypothetical protein phrog_26474 unknown function unknown function 1 8576 8884
YP_009273945.1 NC_030911_p12 head-to-tail connector protein phrog_442 head-tail adaptor connector 1 8930 9409
YP_009273952.1 NC_030911_p19 hypothetical protein phrog_5010 tail assembly chaperone tail 1 11432 11782
YP_009273970.1 NC_030911_p37 hypothetical protein phrog_18889 unknown function unknown function -1 27934 28689
YP_009273978.1 NC_030911_p45 hypothetical protein phrog_33536 unknown function unknown function 1 31821 31901
YP_009273995.1 NC_030911_p62 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 40094 40318
YP_009273964.1 NC_030911_p31 DNA binding protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 24492 24782
YP_009273941.1 NC_030911_p8 portal protein phrog_12 portal protein head and packaging 1 5071 6363
YP_009273954.1 NC_030911_p21 minor tail protein phrog_106 minor tail protein tail 1 15645 16475
YP_009274011.1 NC_030911_p78 hypothetical protein phrog_23577 unknown function unknown function 1 44837 45121
YP_009273989.1 NC_030911_p56 crossover junction endodeoxyribonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 38151 38588
YP_009273971.1 NC_030911_p38 immunity repressor phrog_19097 transcriptional repressor transcription regulation -1 28686 29090
YP_009274012.1 NC_030911_p79 hypothetical protein phrog_26449 unknown function unknown function 1 45239 45616
YP_009274005.1 NC_030911_p72 hypothetical protein phrog_9751 unknown function unknown function 1 43774 44013
YP_009274003.1 NC_030911_p70 hypothetical protein phrog_20979 unknown function unknown function 1 43231 43383
YP_009273939.1 NC_030911_p6 hypothetical protein phrog_10594 unknown function unknown function 1 3067 3432
YP_009273972.1 NC_030911_p39 HTH DNA binding protein phrog_9103 transcriptional repressor transcription regulation 1 29272 29481
YP_009273936.1 NC_030911_p3 hypothetical protein phrog_23023 unknown function unknown function -1 1212 1574
YP_009273984.1 NC_030911_p51 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 34027 34818