Genomic map of Gordonia phage OneUp (NC_030917)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_030917
Definition
Gordonia phage OneUp, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Oneupvirus.
DB of origin
REFSEQ
Length
93577
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
163
%GC
61.48
Number of singletons
33
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009274491.1 NC_030917_p66 hypothetical protein singleton unknown function unknown function 1 50712 50978
YP_009274507.1 NC_030917_p82 hypothetical protein phrog_10563 unknown function unknown function 1 59239 59778
YP_009274508.1 NC_030917_p83 hypothetical protein phrog_14521 unknown function unknown function 1 59775 60089
YP_009274480.1 NC_030917_p55 RtcB-like protein phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 45207 46424
YP_009274471.1 NC_030917_p46 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 40373 40717
YP_009274496.1 NC_030917_p71 hypothetical protein phrog_13065 unknown function unknown function 1 53538 54050
YP_009274517.1 NC_030917_p92 nicotinate phosphoribosyl transferase phrog_448 nicotinamide phosphoribosyl transferase other 1 63701 65173
YP_009274484.1 NC_030917_p59 hypothetical protein singleton unknown function unknown function 1 47423 47593
YP_009274455.1 NC_030917_p30 tail assembly chaperone phrog_2624 tail assembly chaperone tail 1 16642 17615
YP_009274461.1 NC_030917_p36 lysin A phrog_9506 endolysin lysis 1 29381 30328
YP_009274566.1 NC_030917_p141 hypothetical protein phrog_14253 unknown function unknown function -1 84619 84894
YP_009274439.1 NC_030917_p14 hypothetical protein phrog_11962 unknown function unknown function 1 5501 5737
YP_009274489.1 NC_030917_p64 hypothetical protein singleton unknown function unknown function 1 48468 48665
YP_009274539.1 NC_030917_p114 hypothetical protein phrog_14081 unknown function unknown function 1 74632 74949
YP_009274570.1 NC_030917_p145 hypothetical protein phrog_14095 unknown function unknown function -1 85616 85852
YP_009274553.1 NC_030917_p128 hypothetical protein phrog_12823 unknown function unknown function -1 81007 81381
YP_009274426.1 NC_030917_p1 hypothetical protein phrog_2864 unknown function unknown function -1 117 311
YP_009274502.1 NC_030917_p77 HTH DNA binding protein phrog_66 excisionase and transcriptional regulator integration and excision 1 56418 56615
YP_009274495.1 NC_030917_p70 hypothetical protein singleton unknown function unknown function 1 53353 53541
YP_009274528.1 NC_030917_p103 hypothetical protein phrog_14134 unknown function unknown function 1 70135 70425
YP_009274448.1 NC_030917_p23 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13478 13864
YP_009274573.1 NC_030917_p148 hypothetical protein phrog_3351 unknown function unknown function -1 86415 86636
YP_009274521.1 NC_030917_p96 hypothetical protein singleton unknown function unknown function 1 66394 66597
YP_009274509.1 NC_030917_p84 MazG phrog_229 MazG-like pyrophosphatase other 1 60091 60429
YP_009274485.1 NC_030917_p60 hypothetical protein phrog_7382 unknown function unknown function 1 47595 47843
YP_009274518.1 NC_030917_p93 hypothetical protein phrog_1810 unknown function unknown function 1 65176 65646
YP_009274478.1 NC_030917_p53 hypothetical protein phrog_14021 unknown function unknown function 1 44252 44464
YP_009274536.1 NC_030917_p111 hypothetical protein phrog_11731 unknown function unknown function 1 73088 73702
YP_009274514.1 NC_030917_p89 hypothetical protein phrog_14299 unknown function unknown function 1 61787 62410
YP_009274494.1 NC_030917_p69 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 51739 52776
YP_009274477.1 NC_030917_p52 hypothetical protein phrog_14204 unknown function unknown function 1 43454 44155
YP_009274545.1 NC_030917_p120 hypothetical protein phrog_16254 unknown function unknown function 1 76870 77817
YP_009274459.1 NC_030917_p34 minor tail protein phrog_110 minor tail protein tail 1 27048 28739
YP_009274428.1 NC_030917_p3 hypothetical protein singleton unknown function unknown function -1 616 870
YP_009274531.1 NC_030917_p106 hypothetical protein phrog_7999 unknown function unknown function 1 70969 71673
YP_009274537.1 NC_030917_p112 nucleotidyltransferase phrog_388 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 73707 74444
YP_009274438.1 NC_030917_p13 hypothetical protein phrog_22764 unknown function unknown function 1 4987 5196
YP_009274525.1 NC_030917_p100 HNH endonuclease phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 68668 69312
YP_009274580.1 NC_030917_p155 hypothetical protein phrog_28545 unknown function unknown function -1 88851 88979
YP_009274454.1 NC_030917_p29 hypothetical protein phrog_14494 unknown function unknown function 1 16387 16605
YP_009274523.1 NC_030917_p98 hypothetical protein singleton unknown function unknown function 1 66944 67060
YP_009274571.1 NC_030917_p146 hypothetical protein phrog_5452 unknown function unknown function -1 85849 86097
YP_009274469.1 NC_030917_p44 hypothetical protein phrog_13892 minor tail protein tail 1 35317 38448
YP_009274584.1 NC_030917_p159 hypothetical protein phrog_9377 unknown function unknown function -1 90949 91137
YP_009274488.1 NC_030917_p63 hypothetical protein phrog_8575 unknown function unknown function 1 48247 48471
YP_009274587.1 NC_030917_p162 hypothetical protein singleton unknown function unknown function -1 92498 92719
YP_009274534.1 NC_030917_p109 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism 1 72254 72691
YP_009274470.1 NC_030917_p45 hypothetical protein singleton unknown function unknown function 1 38445 40376
YP_009274436.1 NC_030917_p11 hypothetical protein phrog_18295 unknown function unknown function 1 3220 3600
YP_009274443.1 NC_030917_p18 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 9868 10794
YP_009274588.1 NC_030917_p163 hypothetical protein singleton unknown function unknown function -1 92842 93090
YP_009274465.1 NC_030917_p40 hypothetical protein phrog_3798 unknown function unknown function 1 31264 31683
YP_009274458.1 NC_030917_p33 minor tail protein phrog_106 minor tail protein tail 1 26148 27029
YP_009274434.1 NC_030917_p9 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2116 2424
YP_009274532.1 NC_030917_p107 hypothetical protein phrog_12797 unknown function unknown function 1 71670 71918
YP_009274505.1 NC_030917_p80 HTH DNA binding protein phrog_1590 unknown function unknown function 1 57102 58247
YP_009274435.1 NC_030917_p10 hypothetical protein phrog_6944 unknown function unknown function 1 2429 3223
YP_009274512.1 NC_030917_p87 hypothetical protein singleton unknown function unknown function 1 61060 61476
YP_009274527.1 NC_030917_p102 single stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 69624 70130
YP_009274564.1 NC_030917_p139 hypothetical protein phrog_11957 unknown function unknown function -1 84264 84410
YP_009274473.1 NC_030917_p48 exodeoxyribonuclease VII large subunit phrog_9454 exonuclease DNA, RNA and nucleotide metabolism 1 41681 42853
YP_009274565.1 NC_030917_p140 hypothetical protein singleton unknown function unknown function -1 84410 84622
YP_009274551.1 NC_030917_p126 hypothetical protein singleton unknown function unknown function 1 80483 80674
YP_009274498.1 NC_030917_p73 hypothetical protein phrog_24965 unknown function unknown function 1 54765 54983
YP_009274548.1 NC_030917_p123 hypothetical protein phrog_11181 unknown function unknown function 1 79159 79356
YP_009274550.1 NC_030917_p125 hypothetical protein phrog_1042 unknown function unknown function 1 80067 80324
YP_009274524.1 NC_030917_p99 DnaB helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 67041 68675
YP_009274482.1 NC_030917_p57 hypothetical protein phrog_780 unknown function unknown function 1 46990 47205
YP_009274569.1 NC_030917_p144 hypothetical protein phrog_7172 unknown function unknown function -1 85352 85606
YP_009274542.1 NC_030917_p117 hypothetical protein singleton unknown function unknown function 1 75348 75512
YP_009274577.1 NC_030917_p152 hypothetical protein phrog_11293 unknown function unknown function -1 87772 88224
YP_009274561.1 NC_030917_p136 hypothetical protein singleton unknown function unknown function -1 83472 83708
YP_009274433.1 NC_030917_p8 hypothetical protein phrog_12377 unknown function unknown function 1 1818 2105
YP_009274519.1 NC_030917_p94 hypothetical protein phrog_289 GTP-binding domain other 1 65646 66053
YP_009274456.1 NC_030917_p31 tail assembly chaperone phrog_11681 tail assembly chaperone tail 1 16642 17106
YP_009274572.1 NC_030917_p147 hypothetical protein singleton unknown function unknown function -1 86117 86314
YP_009274479.1 NC_030917_p54 metallophosphatase phrog_547 phosphoesterase other 1 44461 45207
YP_009274576.1 NC_030917_p151 hypothetical protein phrog_3842 unknown function unknown function -1 87056 87682
YP_009274546.1 NC_030917_p121 hypothetical protein phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 77814 78209
YP_009274460.1 NC_030917_p35 endolysin phrog_6007 endolysin lysis 1 28776 29381
YP_009274520.1 NC_030917_p95 hypothetical protein phrog_7314 unknown function unknown function 1 66053 66397
YP_009274557.1 NC_030917_p132 hypothetical protein phrog_13635 unknown function unknown function -1 82171 82518
YP_009274526.1 NC_030917_p101 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 69312 69614
YP_009274541.1 NC_030917_p116 hypothetical protein phrog_9642 unknown function unknown function 1 75136 75351
YP_009274552.1 NC_030917_p127 hypothetical protein phrog_11980 unknown function unknown function -1 80671 81006
YP_009274476.1 NC_030917_p51 hypothetical protein singleton unknown function unknown function 1 43200 43445
YP_009274568.1 NC_030917_p143 hypothetical protein phrog_13323 unknown function unknown function -1 85160 85273
YP_009274579.1 NC_030917_p154 hypothetical protein singleton unknown function unknown function -1 88590 88712
YP_009274544.1 NC_030917_p119 EndoVII phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 76398 76883
YP_009274490.1 NC_030917_p65 integrase phrog_1 integrase integration and excision 1 49149 50507
YP_009274510.1 NC_030917_p85 hypothetical protein phrog_14196 phosphohydrolase other 1 60426 60740
YP_009274549.1 NC_030917_p124 lysin B phrog_6187 unknown function unknown function 1 79435 80058
YP_009274430.1 NC_030917_p5 hypothetical protein phrog_14795 unknown function unknown function -1 1076 1237
YP_009274538.1 NC_030917_p113 hypothetical protein singleton unknown function unknown function 1 74444 74635
YP_009274432.1 NC_030917_p7 hypothetical protein singleton unknown function unknown function -1 1509 1769
YP_009274558.1 NC_030917_p133 hypothetical protein phrog_11149 unknown function unknown function -1 82515 83012
YP_009274437.1 NC_030917_p12 hypothetical protein phrog_8206 unknown function unknown function 1 3597 4058
YP_009274543.1 NC_030917_p118 nucleotidase phrog_420 unknown function unknown function 1 75778 76401
YP_009274515.1 NC_030917_p90 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 62464 62868
YP_009274431.1 NC_030917_p6 hypothetical protein phrog_4392 unknown function unknown function -1 1234 1509
YP_009274504.1 NC_030917_p79 hypothetical protein phrog_11291 unknown function unknown function 1 56848 57033
YP_009274440.1 NC_030917_p15 hypothetical protein phrog_226 minor tail protein tail 1 6025 6501
YP_009274475.1 NC_030917_p50 hypothetical protein phrog_11909 unknown function unknown function 1 43048 43203
YP_009274466.1 NC_030917_p41 minor tail protein phrog_4120 minor tail protein tail 1 31683 32762
YP_009274442.1 NC_030917_p17 portal protein phrog_104 portal protein head and packaging 1 8258 9868
YP_009274467.1 NC_030917_p42 minor tail protein phrog_2689 minor tail protein tail 1 32790 34595
YP_009274529.1 NC_030917_p104 hypothetical protein phrog_10802 transcriptional regulator WhiB-like transcription regulation 1 70430 70744
YP_009274547.1 NC_030917_p122 ribonucleotide reductase phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 78206 79159
YP_009274453.1 NC_030917_p28 major tail protein phrog_476 major tail protein tail 1 15613 16278
YP_009274429.1 NC_030917_p4 hypothetical protein phrog_7155 unknown function unknown function -1 867 1079
YP_009274582.1 NC_030917_p157 hypothetical protein phrog_12613 unknown function unknown function -1 90357 90548
YP_009274463.1 NC_030917_p38 hypothetical protein phrog_4511 unknown function unknown function 1 30753 31055
YP_009274462.1 NC_030917_p37 holin phrog_565 holin lysis 1 30331 30756
YP_009274556.1 NC_030917_p131 hypothetical protein singleton unknown function unknown function -1 81956 82174
YP_009274501.1 NC_030917_p76 hypothetical protein phrog_13104 unknown function unknown function 1 56155 56421
YP_009274441.1 NC_030917_p16 terminase phrog_9 terminase large subunit head and packaging 1 6501 8249
YP_009274535.1 NC_030917_p110 hypothetical protein phrog_13487 unknown function unknown function 1 72699 73091
YP_009274574.1 NC_030917_p149 hypothetical protein phrog_9027 unknown function unknown function -1 86638 86856
YP_009274533.1 NC_030917_p108 hypothetical protein phrog_13511 unknown function unknown function 1 71911 72249
YP_009274445.1 NC_030917_p20 head decoration protein phrog_3583 head decoration head and packaging 1 11666 12067
YP_009274506.1 NC_030917_p81 hypothetical protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 58250 59242
YP_009274581.1 NC_030917_p156 hypothetical protein phrog_29643 unknown function unknown function -1 89001 90272
YP_009274575.1 NC_030917_p150 hypothetical protein phrog_14483 unknown function unknown function -1 86853 87059
YP_009274559.1 NC_030917_p134 hypothetical protein phrog_13514 unknown function unknown function -1 83009 83218
YP_009274481.1 NC_030917_p56 homing endonuclease phrog_5046 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46421 46987
YP_009274446.1 NC_030917_p21 capsid protein phrog_29 major head protein head and packaging 1 12114 13157
YP_009274578.1 NC_030917_p153 hypothetical protein phrog_4158 unknown function unknown function -1 88228 88590
YP_009274554.1 NC_030917_p129 hypothetical protein singleton unknown function unknown function -1 81449 81661
YP_009274487.1 NC_030917_p62 hypothetical protein singleton unknown function unknown function 1 48021 48257
YP_009274474.1 NC_030917_p49 exodeoxyribonuclease VII small subunit phrog_13423 exonuclease DNA, RNA and nucleotide metabolism 1 42866 43051
YP_009274450.1 NC_030917_p25 hypothetical protein phrog_5210 neck protein connector 1 14211 14657
YP_009274464.1 NC_030917_p39 hypothetical protein phrog_6071 unknown function unknown function 1 31052 31267
YP_009274567.1 NC_030917_p142 hypothetical protein phrog_14522 unknown function unknown function -1 84891 85154
YP_009274555.1 NC_030917_p130 hypothetical protein singleton unknown function unknown function -1 81786 81959
YP_009274486.1 NC_030917_p61 hypothetical protein singleton unknown function unknown function 1 47843 48028
YP_009274586.1 NC_030917_p161 hypothetical protein singleton unknown function unknown function -1 92140 92403
YP_009274563.1 NC_030917_p138 hypothetical protein singleton unknown function unknown function -1 84004 84261
YP_009274540.1 NC_030917_p115 hypothetical protein singleton unknown function unknown function 1 74946 75134
YP_009274516.1 NC_030917_p91 phosphoribosyl-pyrophosphate synthase phrog_619 ribose-phosphate pyrophosphokinase other 1 62865 63704
YP_009274522.1 NC_030917_p97 hypothetical protein phrog_572 unknown function unknown function 1 66594 66947
YP_009274503.1 NC_030917_p78 hypothetical protein phrog_8743 unknown function unknown function 1 56617 56829
YP_009274511.1 NC_030917_p86 hypothetical protein singleton unknown function unknown function 1 60737 61063
YP_009274513.1 NC_030917_p88 hypothetical protein phrog_13552 unknown function unknown function 1 61473 61790
YP_009274560.1 NC_030917_p135 hypothetical protein phrog_12664 unknown function unknown function -1 83218 83475
YP_009274468.1 NC_030917_p43 hypothetical protein phrog_10433 minor tail protein tail 1 34604 35317
YP_009274452.1 NC_030917_p27 EndoVII phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 15247 15564
YP_009274447.1 NC_030917_p22 hypothetical protein singleton unknown function unknown function 1 13194 13478
YP_009274457.1 NC_030917_p32 tape measure protein phrog_7025 tail length tape measure protein tail 1 17638 26148
YP_009274497.1 NC_030917_p72 RecT phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 54043 54768
YP_009274449.1 NC_030917_p24 hypothetical protein phrog_501 head closure Hc1 connector 1 13864 14208
YP_009274562.1 NC_030917_p137 hypothetical protein singleton unknown function unknown function -1 83705 83992
YP_009274444.1 NC_030917_p19 scaffolding protein phrog_4708 head scaffolding protein head and packaging 1 10856 11653
YP_009274451.1 NC_030917_p26 hypothetical protein phrog_123 tail terminator connector 1 14654 15118
YP_009274585.1 NC_030917_p160 hypothetical protein phrog_14511 unknown function unknown function -1 91369 91899
YP_009274493.1 NC_030917_p68 hypothetical protein singleton unknown function unknown function 1 51518 51742
YP_009274499.1 NC_030917_p74 FAD-dependent thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 54980 55717
YP_009274530.1 NC_030917_p105 hypothetical protein phrog_6554 unknown function unknown function 1 70710 70988
YP_009274500.1 NC_030917_p75 hypothetical protein phrog_14230 unknown function unknown function 1 55817 56158
YP_009274483.1 NC_030917_p58 hypothetical protein phrog_14206 unknown function unknown function 1 47205 47426
YP_009274472.1 NC_030917_p47 hypothetical protein phrog_13269 unknown function unknown function -1 40734 41207
YP_009274427.1 NC_030917_p2 hypothetical protein singleton unknown function unknown function -1 308 619
YP_009274492.1 NC_030917_p67 immunity repressor phrog_13730 transcriptional repressor transcription regulation -1 51006 51335
YP_009274583.1 NC_030917_p158 hypothetical protein phrog_6619 unknown function unknown function -1 90622 90900