Genomic map of Gordonia phage Utz (NC_030921)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_030921
Definition
Gordonia phage Utz, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
49768
Host Name
Gordonia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
71
%GC
67.65
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009274958.1 NC_030921_p13 head-to-tail connector protein phrog_123 tail terminator connector 1 8127 8546
YP_009274976.1 NC_030921_p31 integrase phrog_1 integrase integration and excision 1 28505 29425
YP_009274996.1 NC_030921_p51 ssDNA binding protein phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 38758 39849
YP_009275010.1 NC_030921_p65 hypothetical protein phrog_11256 DNA binding protein DNA, RNA and nucleotide metabolism 1 45168 46367
YP_009274966.1 NC_030921_p21 lysin A phrog_3084 endolysin lysis 1 19015 19926
YP_009274977.1 NC_030921_p32 hypothetical protein phrog_12638 unknown function unknown function -1 29667 30536
YP_009274971.1 NC_030921_p26 hypothetical protein phrog_9406 unknown function unknown function 1 21944 22318
YP_009274986.1 NC_030921_p41 hypothetical protein phrog_9588 unknown function unknown function 1 35102 35425
YP_009274957.1 NC_030921_p12 head-to-tail connector protein phrog_5837 head closure Hc1 connector 1 7843 8130
YP_009274989.1 NC_030921_p44 HTH DNA binding domain protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 35948 36310
YP_009274956.1 NC_030921_p11 head-to-tail connector protein phrog_9658 head-tail connector protein connector 1 7560 7850
YP_009274954.1 NC_030921_p9 head-to-tail connector protein phrog_501 head closure Hc1 connector 1 6959 7321
YP_009274998.1 NC_030921_p53 hypothetical protein phrog_12075 membrane protein moron, auxiliary metabolic gene and host takeover 1 40148 40360
YP_009274981.1 NC_030921_p36 immunity repressor phrog_6288 unknown function unknown function -1 32756 33436
YP_009274948.1 NC_030921_p3 portal protein phrog_113 portal protein head and packaging 1 1940 3316
YP_009275013.1 NC_030921_p68 hypothetical protein phrog_908 unknown function unknown function 1 47303 48079
YP_009274970.1 NC_030921_p25 lysin B phrog_102 endolysin lysis 1 21147 21947
YP_009275003.1 NC_030921_p58 hypothetical protein phrog_11360 unknown function unknown function 1 41504 41722
YP_009275016.1 NC_030921_p71 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49339 49701
YP_009274955.1 NC_030921_p10 hypothetical protein phrog_16006 unknown function unknown function 1 7330 7563
YP_009274951.1 NC_030921_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5209 6138
YP_009274964.1 NC_030921_p19 minor tail protein phrog_110 minor tail protein tail 1 16645 18291
YP_009274968.1 NC_030921_p23 membrane protein phrog_11800 membrane protein moron, auxiliary metabolic gene and host takeover 1 20454 20708
YP_009275002.1 NC_030921_p57 hypothetical protein phrog_15149 unknown function unknown function 1 41209 41511
YP_009275001.1 NC_030921_p56 hypothetical protein phrog_10682 unknown function unknown function 1 41024 41212
YP_009274980.1 NC_030921_p35 hypothetical protein phrog_87 metallo-protease other -1 32270 32686
YP_009274985.1 NC_030921_p40 hypothetical protein phrog_8218 unknown function unknown function 1 34941 35105
YP_009274988.1 NC_030921_p43 hypothetical protein phrog_11014 unknown function unknown function 1 35721 35951
YP_009274991.1 NC_030921_p46 hypothetical protein phrog_9981 unknown function unknown function 1 36642 36830
YP_009274978.1 NC_030921_p33 integrase phrog_95 integrase integration and excision 1 30671 32062
YP_009275012.1 NC_030921_p67 hypothetical protein singleton unknown function unknown function 1 46951 47124
YP_009275008.1 NC_030921_p63 hypothetical protein phrog_2857 tail fiber protein tail 1 44423 44719
YP_009275000.1 NC_030921_p55 hypothetical protein phrog_10784 membrane protein moron, auxiliary metabolic gene and host takeover 1 40845 41027
YP_009274994.1 NC_030921_p49 hypothetical protein phrog_572 unknown function unknown function 1 37479 37835
YP_009274969.1 NC_030921_p24 membrane protein phrog_10261 membrane protein moron, auxiliary metabolic gene and host takeover 1 20695 21153
YP_009275014.1 NC_030921_p69 hypothetical protein phrog_29880 unknown function unknown function 1 48076 48399
YP_009275015.1 NC_030921_p70 hypothetical protein phrog_21675 unknown function unknown function 1 48396 49109
YP_009275009.1 NC_030921_p64 hypothetical protein phrog_20666 unknown function unknown function 1 44716 45171
YP_009274949.1 NC_030921_p4 capsid maturation protease phrog_3894 head maturation protease head and packaging 1 3316 4728
YP_009275004.1 NC_030921_p59 hypothetical protein phrog_12575 unknown function unknown function 1 41719 42129
YP_009274952.1 NC_030921_p7 head-to-tail connector protein phrog_2322 head-tail connector protein connector 1 6142 6570
YP_009274959.1 NC_030921_p14 major tail protein phrog_117 major tail protein tail 1 8653 9291
YP_009274961.1 NC_030921_p16 tail assembly chaperone phrog_5010 tail assembly chaperone tail 1 9394 9804
YP_009274967.1 NC_030921_p22 membrane protein phrog_443 holin lysis 1 19929 20390
YP_009275005.1 NC_030921_p60 DNA methylase phrog_67 DNA methyltransferase other 1 42126 43184
YP_009274974.1 NC_030921_p29 hypothetical protein phrog_8055 unknown function unknown function 1 24877 25194
YP_009274997.1 NC_030921_p52 hypothetical protein phrog_8105 unknown function unknown function 1 39846 40151
YP_009275006.1 NC_030921_p61 hypothetical protein phrog_10260 unknown function unknown function 1 43181 43348
YP_009275011.1 NC_030921_p66 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 46364 46954
YP_009274999.1 NC_030921_p54 hypothetical protein phrog_8336 unknown function unknown function 1 40344 40841
YP_009274995.1 NC_030921_p50 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 37832 38761
YP_009274962.1 NC_030921_p17 tape measure protein phrog_4197 tail length tape measure protein tail 1 10248 15791
YP_009274950.1 NC_030921_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4730 5182
YP_009274947.1 NC_030921_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 360 1928
YP_009274984.1 NC_030921_p39 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 34104 34865
YP_009275007.1 NC_030921_p62 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 43338 44426
YP_009274965.1 NC_030921_p20 lysin A phrog_1512 endolysin lysis 1 18308 19015
YP_009274982.1 NC_030921_p37 hypothetical protein phrog_6463 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 33620 33931
YP_009274993.1 NC_030921_p48 hypothetical protein phrog_6877 unknown function unknown function 1 37138 37482
YP_009274972.1 NC_030921_p27 minor tail protein phrog_4120 minor tail protein tail 1 22311 23378
YP_009274953.1 NC_030921_p8 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 6567 6959
YP_009274975.1 NC_030921_p30 minor tail protein phrog_36751 minor tail protein tail 1 25187 28360
YP_009274946.1 NC_030921_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 89 397
YP_009274983.1 NC_030921_p38 hypothetical protein phrog_15107 unknown function unknown function 1 33928 34107
YP_009274960.1 NC_030921_p15 tail assembly chaperone phrog_8183 tail assembly chaperone tail 1 9394 10178
YP_009274963.1 NC_030921_p18 minor tail protein phrog_106 minor tail protein tail 1 15788 16648
YP_009274990.1 NC_030921_p45 hypothetical protein phrog_5984 unknown function unknown function 1 36307 36645
YP_009274973.1 NC_030921_p28 minor tail protein phrog_737 minor tail protein tail 1 23378 24877
YP_009274987.1 NC_030921_p42 hypothetical protein phrog_9909 unknown function unknown function 1 35422 35724
YP_009274979.1 NC_030921_p34 HTH DNA binding domain protein phrog_5316 unknown function unknown function -1 32064 32273
YP_009274992.1 NC_030921_p47 hypothetical protein phrog_1622 unknown function unknown function 1 36827 37141