Genomic map of Bacillus phage Shbh1 (NC_030925)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_030925
Definition
Bacillus phage Shbh1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Shalavirus; Bacillus virus Shbh1.
DB of origin
REFSEQ
Length
138081
Host Name
Bacillus sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
177
%GC
36.42
Number of singletons
53
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009275233.1 NC_030925_p61 hypothetical protein phrog_14657 unknown function unknown function -1 34892 35176
YP_009275261.1 NC_030925_p89 hypothetical protein phrog_2259 Rnase H DNA, RNA and nucleotide metabolism -1 48347 48922
YP_009275280.1 NC_030925_p108 portal protein phrog_12 portal protein head and packaging 1 62170 63822
YP_009275266.1 NC_030925_p94 hypothetical protein phrog_1991 unknown function unknown function -1 53216 53536
YP_009275234.1 NC_030925_p62 hypothetical protein singleton unknown function unknown function -1 35289 35450
YP_009275282.1 NC_030925_p110 hypothetical protein phrog_1133 unknown function unknown function 1 64805 65578
YP_009275290.1 NC_030925_p118 structural protein phrog_985 virion structural protein head and packaging 1 72934 73359
YP_009275223.1 NC_030925_p51 hypothetical protein singleton unknown function unknown function 1 29707 29931
YP_009275301.1 NC_030925_p129 hypothetical protein phrog_1073 unknown function unknown function 1 87774 88301
YP_009275206.1 NC_030925_p34 hypothetical protein phrog_5459 unknown function unknown function 1 21505 21801
YP_009275300.1 NC_030925_p128 hypothetical protein phrog_1011 virion structural protein head and packaging 1 87031 87774
YP_009275222.1 NC_030925_p50 hypothetical protein phrog_38232 unknown function unknown function 1 29492 29653
YP_009275235.1 NC_030925_p63 hypothetical protein singleton unknown function unknown function -1 35540 35662
YP_009275189.1 NC_030925_p17 hypothetical protein singleton unknown function unknown function 1 9770 10090
YP_009275330.1 NC_030925_p158 hypothetical protein phrog_25967 unknown function unknown function 1 120830 121126
YP_009275198.1 NC_030925_p26 heat shock ClpB-like protein singleton unknown function unknown function 1 17165 17797
YP_009275244.1 NC_030925_p72 hypothetical protein singleton unknown function unknown function -1 39672 39836
YP_009275215.1 NC_030925_p43 hypothetical protein phrog_21731 unknown function unknown function 1 25120 25470
YP_009275257.1 NC_030925_p85 dephospho-CoA kinase-like protein phrog_139 deoxynucleoside monophosphate kinase other -1 45784 46359
YP_009275225.1 NC_030925_p53 hypothetical protein phrog_19112 unknown function unknown function 1 30211 30450
YP_009275217.1 NC_030925_p45 hypothetical protein singleton unknown function unknown function 1 25822 26109
YP_009275224.1 NC_030925_p52 hypothetical protein phrog_34611 unknown function unknown function 1 29954 30214
YP_009275239.1 NC_030925_p67 transposase phrog_13964 transposase integration and excision -1 37074 37844
YP_009275343.1 NC_030925_p171 DNA repair exonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 132160 133467
YP_009275253.1 NC_030925_p81 AbrB family transcriptional regulator-like protein singleton unknown function unknown function -1 43712 44203
YP_009275250.1 NC_030925_p78 hypothetical protein singleton unknown function unknown function -1 41992 42285
YP_009275295.1 NC_030925_p123 tapemeasure-like protein phrog_1047 tail associated lysin tail 1 75699 79421
YP_009275195.1 NC_030925_p23 hypothetical protein phrog_3750 unknown function unknown function 1 13542 14594
YP_009275237.1 NC_030925_p65 hypothetical protein singleton unknown function unknown function -1 36227 36430
YP_009275321.1 NC_030925_p149 hypothetical protein phrog_1095 unknown function unknown function 1 113803 114201
YP_009275193.1 NC_030925_p21 hypothetical protein phrog_3796 unknown function unknown function 1 12564 12764
YP_009275336.1 NC_030925_p164 hypothetical protein phrog_1089 unknown function unknown function 1 128222 128575
YP_009275218.1 NC_030925_p46 hydroxylamine reductase-like protein singleton unknown function unknown function 1 26125 26511
YP_009275267.1 NC_030925_p95 hypothetical protein phrog_1116 unknown function unknown function -1 53523 54044
YP_009275281.1 NC_030925_p109 prohead protease phrog_1028 head maturation protease head and packaging 1 63983 64780
YP_009275238.1 NC_030925_p66 hypothetical protein phrog_98 unknown function unknown function -1 36499 36891
YP_009275323.1 NC_030925_p151 endonuclease - holliday junction resolvase-like protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 114481 115038
YP_009275310.1 NC_030925_p138 hypothetical protein singleton unknown function unknown function 1 101893 102117
YP_009275314.1 NC_030925_p142 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 106337 107806
YP_009275320.1 NC_030925_p148 hypothetical protein phrog_1291 unknown function unknown function 1 113452 113796
YP_009275190.1 NC_030925_p18 plasmid segregation protein-like protein phrog_691 partition protein DNA, RNA and nucleotide metabolism 1 10269 11354
YP_009275316.1 NC_030925_p144 exonuclease subunit 2-like protein phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 109172 111070
YP_009275299.1 NC_030925_p127 hypothetical protein singleton unknown function unknown function 1 86612 86959
YP_009275188.1 NC_030925_p16 hypothetical protein singleton unknown function unknown function 1 9117 9773
YP_009275255.1 NC_030925_p83 ATP-dependent exonuclease-like protein singleton unknown function unknown function -1 44585 44872
YP_009275309.1 NC_030925_p137 hypothetical protein singleton unknown function unknown function 1 101590 101892
YP_009275175.1 NC_030925_p3 hypothetical protein phrog_1303 DNA binding protein DNA, RNA and nucleotide metabolism 1 1890 2483
YP_009275272.1 NC_030925_p100 hypothetical protein phrog_2298 unknown function unknown function -1 57688 58218
YP_009275311.1 NC_030925_p139 hypothetical protein phrog_134 unknown function unknown function 1 102119 102277
YP_009275232.1 NC_030925_p60 hypothetical protein singleton unknown function unknown function -1 33819 34040
YP_009275278.1 NC_030925_p106 XRE family transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 61306 61539
YP_009275340.1 NC_030925_p168 hypothetical protein phrog_215 structural protein with Ig domain head and packaging 1 130099 130629
YP_009275327.1 NC_030925_p155 hypothetical protein phrog_6394 unknown function unknown function 1 119344 119559
YP_009275347.1 NC_030925_p175 hypothetical protein phrog_5660 unknown function unknown function 1 135406 135954
YP_009275307.1 NC_030925_p135 tail protein phrog_877 unknown function unknown function 1 95056 98556
YP_009275293.1 NC_030925_p121 hypothetical protein phrog_1038 tail assembly chaperone tail 1 74575 74988
YP_009275346.1 NC_030925_p174 hypothetical protein phrog_984 unknown function unknown function 1 134593 135318
YP_009275291.1 NC_030925_p119 group-specific protein-like protein phrog_25185 unknown function unknown function 1 73446 73736
YP_009275287.1 NC_030925_p115 hypothetical protein phrog_1127 unknown function unknown function 1 69313 69942
YP_009275329.1 NC_030925_p157 integration host factor-like protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism 1 120435 120743
YP_009275241.1 NC_030925_p69 hypothetical protein singleton unknown function unknown function -1 38226 38585
YP_009275326.1 NC_030925_p154 ribonucleotide reductase beta subunit-like protein phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 118204 119334
YP_009275251.1 NC_030925_p79 hypothetical protein phrog_37878 unknown function unknown function -1 42763 43170
YP_009275305.1 NC_030925_p133 structural protein phrog_1394 virion structural protein head and packaging 1 91707 92237
YP_009275177.1 NC_030925_p5 flagellar basal-body rod modification protein singleton unknown function unknown function 1 3826 4212
YP_009275308.1 NC_030925_p136 YomR-like protein phrog_2712 tail fiber protein tail 1 98738 101587
YP_009275319.1 NC_030925_p147 deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 112796 113434
YP_009275248.1 NC_030925_p76 DNA-cytosine methyltransferase-like protein phrog_116 DNA methyltransferase other -1 40739 41704
YP_009275243.1 NC_030925_p71 hypothetical protein singleton unknown function unknown function -1 38936 39199
YP_009275322.1 NC_030925_p150 hypothetical protein phrog_419 unknown function unknown function 1 114188 114481
YP_009275201.1 NC_030925_p29 inner centromere protein A-like protein singleton unknown function unknown function 1 18442 19260
YP_009275324.1 NC_030925_p152 ribonucleoside-diphosphate reductase alpha subunit-like protein phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 115175 117547
YP_009275197.1 NC_030925_p25 DNA translocase-like protein phrog_3551 FtsK/SpoIIIE-like protein moron, auxiliary metabolic gene and host takeover 1 14727 17033
YP_009275192.1 NC_030925_p20 metalloendopeptidase-like membrane protein phrog_7767 metallo-endopeptidase other 1 11806 12420
YP_009275277.1 NC_030925_p105 HTH binding domain-like protein phrog_3 transcriptional repressor transcription regulation -1 59865 60107
YP_009275247.1 NC_030925_p75 hypothetical protein singleton unknown function unknown function -1 40593 40739
YP_009275180.1 NC_030925_p8 hypothetical protein singleton unknown function unknown function 1 5448 5663
YP_009275242.1 NC_030925_p70 hypothetical protein singleton unknown function unknown function -1 38630 38905
YP_009275342.1 NC_030925_p170 hypothetical protein phrog_6016 unknown function unknown function 1 131771 132142
YP_009275265.1 NC_030925_p93 N-acetylmuramoyl-L-alanine amidase-like protein phrog_17214 endolysin lysis -1 52235 53170
YP_009275284.1 NC_030925_p112 hypothetical protein phrog_1205 unknown function unknown function 1 67270 67554
YP_009275269.1 NC_030925_p97 terminase large subunit-like protein phrog_675 terminase large subunit head and packaging -1 55198 57000
YP_009275273.1 NC_030925_p101 hypothetical protein phrog_3045 membrane protein moron, auxiliary metabolic gene and host takeover -1 58237 58503
YP_009275331.1 NC_030925_p159 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 121153 124326
YP_009275191.1 NC_030925_p19 hypothetical protein phrog_3536 unknown function unknown function 1 11338 11676
YP_009275258.1 NC_030925_p86 thymidylate synthase-like protein phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 46373 47251
YP_009275219.1 NC_030925_p47 hypothetical protein singleton unknown function unknown function 1 26779 27306
YP_009275334.1 NC_030925_p162 hypothetical protein singleton unknown function unknown function 1 126699 126968
YP_009275231.1 NC_030925_p59 hypothetical protein phrog_3392 unknown function unknown function -1 33327 33806
YP_009275212.1 NC_030925_p40 hypothetical protein phrog_9630 unknown function unknown function 1 23903 24133
YP_009275194.1 NC_030925_p22 hypothetical protein phrog_3528 unknown function unknown function 1 12844 13431
YP_009275236.1 NC_030925_p64 hypothetical protein singleton unknown function unknown function -1 35943 36185
YP_009275315.1 NC_030925_p143 nuclease SbcCD subunit D-like protein phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 107953 108996
YP_009275313.1 NC_030925_p141 DNA binding-like protein phrog_1098 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 104642 106321
YP_009275328.1 NC_030925_p156 hypothetical protein phrog_1054 unknown function unknown function 1 119641 120432
YP_009275303.1 NC_030925_p131 baseplate J family-like protein phrog_6 baseplate wedge subunit tail 1 89028 90074
YP_009275283.1 NC_030925_p111 capsid protein phrog_752 major head protein head and packaging 1 65732 67156
YP_009275249.1 NC_030925_p77 hypothetical protein phrog_3915 unknown function unknown function -1 41724 41999
YP_009275221.1 NC_030925_p49 anti-restriction-like protein phrog_2568 ocr-like anti-restriction moron, auxiliary metabolic gene and host takeover 1 28738 29286
YP_009275335.1 NC_030925_p163 recombinase A-like protein phrog_97 UvsX-like recombinase other 1 127029 128174
YP_009275229.1 NC_030925_p57 exonuclease-like protein phrog_255 exonuclease DNA, RNA and nucleotide metabolism -1 32299 32880
YP_009275341.1 NC_030925_p169 hypothetical protein phrog_1850 exopolyphosphatase other 1 130767 131720
YP_009275245.1 NC_030925_p73 hypothetical protein singleton unknown function unknown function -1 39858 40163
YP_009275246.1 NC_030925_p74 hypothetical protein phrog_6372 unknown function unknown function -1 40396 40578
YP_009275207.1 NC_030925_p35 shikimate dehydrogenase-like protein singleton unknown function unknown function 1 21956 22216
YP_009275226.1 NC_030925_p54 major capsid protein-like protein singleton unknown function unknown function 1 30551 30886
YP_009275262.1 NC_030925_p90 hypothetical protein phrog_3169 unknown function unknown function -1 48923 50350
YP_009275333.1 NC_030925_p161 ssDNA binding domain-lke protein phrog_1867 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 125188 126390
YP_009275263.1 NC_030925_p91 hypothetical protein phrog_15187 unknown function unknown function -1 50444 51313
YP_009275268.1 NC_030925_p96 hypothetical protein phrog_1917 virion structural protein head and packaging -1 54220 55110
YP_009275182.1 NC_030925_p10 hypothetical protein singleton unknown function unknown function 1 6622 6843
YP_009275174.1 NC_030925_p2 hypothetical protein phrog_1104 virion structural protein head and packaging 1 1223 1732
YP_009275289.1 NC_030925_p117 tail sheath-like protein phrog_279 tail sheath tail 1 71178 72884
YP_009275208.1 NC_030925_p36 glutamyl-tRNA synthetase-like protein singleton unknown function unknown function 1 22397 22861
YP_009275325.1 NC_030925_p153 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 117639 118112
YP_009275345.1 NC_030925_p173 hypothetical protein phrog_1080 unknown function unknown function 1 133974 134588
YP_009275186.1 NC_030925_p14 hypothetical protein singleton unknown function unknown function 1 8280 8621
YP_009275204.1 NC_030925_p32 hypothetical protein singleton unknown function unknown function 1 20270 20569
YP_009275339.1 NC_030925_p167 hypothetical protein phrog_1240 Ig domain containing protein other 1 129615 130088
YP_009275332.1 NC_030925_p160 hypothetical protein phrog_1069 unknown function unknown function 1 124423 124908
YP_009275209.1 NC_030925_p37 ATP-dependent DNA helicase RecQ-like protein singleton unknown function unknown function 1 22865 23023
YP_009275275.1 NC_030925_p103 hypothetical protein phrog_937 hemolysin other 1 59264 59578
YP_009275344.1 NC_030925_p172 hypothetical protein phrog_2313 unknown function unknown function 1 133464 133853
YP_009275297.1 NC_030925_p125 tail fiber protein phrog_2204 glycerophosphoryl diester phosphodiesterase other 1 81682 86217
YP_009275271.1 NC_030925_p99 hypothetical protein phrog_1321 unknown function unknown function -1 57411 57704
YP_009275228.1 NC_030925_p56 hypothetical protein phrog_2428 unknown function unknown function -1 31801 32157
YP_009275306.1 NC_030925_p134 YomR-like protein singleton unknown function unknown function 1 92266 94659
YP_009275292.1 NC_030925_p120 cell wall-binding, peptidase-related domain protein phrog_2307 L-alanyl-D-glutamate peptidase other 1 73846 74451
YP_009275205.1 NC_030925_p33 hypothetical protein phrog_19787 unknown function unknown function 1 21131 21418
YP_009275196.1 NC_030925_p24 hypothetical protein phrog_4802 unknown function unknown function 1 14615 14743
YP_009275337.1 NC_030925_p165 RNA polymerase sigma factor-like protein phrog_1025 RNA polymerase sigma factor transcription regulation 1 128565 129200
YP_009275288.1 NC_030925_p116 hypothetical protein phrog_1000 unknown function unknown function 1 69954 70865
YP_009275230.1 NC_030925_p58 DNA/RNA helicase-like protein singleton unknown function unknown function -1 33143 33301
YP_009275302.1 NC_030925_p130 baseplate assembly protein phrog_975 baseplate protein tail 1 88294 89013
YP_009275210.1 NC_030925_p38 glycerate dehydrogenase-like protein singleton unknown function unknown function 1 23011 23475
YP_009275178.1 NC_030925_p6 hypothetical protein singleton unknown function unknown function 1 4327 4515
YP_009275254.1 NC_030925_p82 hypothetical protein phrog_5459 unknown function unknown function -1 44222 44518
YP_009275260.1 NC_030925_p88 hypothetical protein phrog_1257 ribosome associated inhibitor A; zinc finger domain moron, auxiliary metabolic gene and host takeover -1 48032 48241
YP_009275294.1 NC_030925_p122 hypothetical protein phrog_1316 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 1 75056 75631
YP_009275176.1 NC_030925_p4 hypothetical protein phrog_2362 unknown function unknown function 1 3108 3725
YP_009275173.1 NC_030925_p1 hypothetical protein phrog_1007 unknown function unknown function 1 477 1208
YP_009275184.1 NC_030925_p12 hypothetical protein phrog_21421 integrase integration and excision 1 7176 7595
YP_009275318.1 NC_030925_p146 DNA primase-like protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 111666 112733
YP_009275304.1 NC_030925_p132 baseplate-like protein phrog_7378 baseplate protein tail 1 90091 91641
YP_009275227.1 NC_030925_p55 hypothetical protein singleton unknown function unknown function -1 31482 31709
YP_009275181.1 NC_030925_p9 hypothetical protein phrog_9107 unknown function unknown function 1 5679 5921
YP_009275183.1 NC_030925_p11 hypothetical protein singleton unknown function unknown function 1 6874 7011
YP_009275259.1 NC_030925_p87 nucleotidyltransferase-like protein phrog_388 nucleotidyltransferase DNA, RNA and nucleotide metabolism -1 47268 48008
YP_009275216.1 NC_030925_p44 hypothetical protein singleton unknown function unknown function 1 25643 25825
YP_009275338.1 NC_030925_p166 holin phrog_263 holin lysis 1 129255 129548
YP_009275286.1 NC_030925_p114 hypothetical protein phrog_1004 virion structural protein head and packaging 1 68467 69312
YP_009275317.1 NC_030925_p145 hypothetical protein phrog_1070 anti-sigma factor moron, auxiliary metabolic gene and host takeover 1 111067 111663
YP_009275256.1 NC_030925_p84 hypothetical protein phrog_7257 unknown function unknown function -1 44923 45681
YP_009275264.1 NC_030925_p92 PhoH family-like protein phrog_170 PhoH-like phosphate starvation-inducible other -1 51350 52036
YP_009275274.1 NC_030925_p102 hypothetical protein phrog_1481 unknown function unknown function 1 58900 59238
YP_009275298.1 NC_030925_p126 hypothetical protein singleton unknown function unknown function 1 86251 86565
YP_009275348.1 NC_030925_p176 hypothetical protein phrog_2261 unknown function unknown function 1 136051 136575
YP_009275203.1 NC_030925_p31 DNA primase-like protein singleton unknown function unknown function 1 19988 20251
YP_009275279.1 NC_030925_p107 hypothetical protein phrog_1108 portal protein head and packaging 1 61822 62151
YP_009275213.1 NC_030925_p41 hypothetical protein singleton unknown function unknown function 1 24210 24752
YP_009275220.1 NC_030925_p48 PTS sucrose transporter subunit IIABC-like protein singleton unknown function unknown function 1 28377 28652
YP_009275252.1 NC_030925_p80 hypothetical protein phrog_154 replication initiation protein DNA, RNA and nucleotide metabolism -1 43172 43441
YP_009275200.1 NC_030925_p28 hypothetical protein singleton unknown function unknown function 1 18051 18452
YP_009275349.1 NC_030925_p177 hypothetical protein phrog_1113 unknown function unknown function 1 136731 137591
YP_009275185.1 NC_030925_p13 metallophosphoesterase-like protein phrog_547 phosphoesterase other 1 7675 8280
YP_009275276.1 NC_030925_p104 hypothetical protein singleton unknown function unknown function 1 59601 59828
YP_009275214.1 NC_030925_p42 hypothetical protein singleton unknown function unknown function 1 24754 25029
YP_009275285.1 NC_030925_p113 structural protein phrog_772 tail fiber protein tail 1 67581 68453
YP_009275202.1 NC_030925_p30 hypothetical protein phrog_24445 unknown function unknown function 1 19360 20001
YP_009275199.1 NC_030925_p27 hypothetical protein singleton unknown function unknown function 1 17799 18041
YP_009275179.1 NC_030925_p7 hypothetical protein singleton unknown function unknown function 1 4932 5387
YP_009275296.1 NC_030925_p124 tail lysin-like protein phrog_1015 tail protein with lysin activity tail 1 79478 81670
YP_009275312.1 NC_030925_p140 recombination helicase-like protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 102813 104585
YP_009275187.1 NC_030925_p15 transmembrane emp24 domain containing protein singleton unknown function unknown function 1 8618 9124
YP_009275240.1 NC_030925_p68 transposase singleton unknown function unknown function -1 37855 38103
YP_009275270.1 NC_030925_p98 hypothetical protein phrog_1063 terminase small subunit head and packaging -1 57002 57424
YP_009275211.1 NC_030925_p39 hypothetical protein phrog_13188 unknown function unknown function 1 23551 23805