| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_030930 |
Definition |
Gordonia phage Bowser, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bowservirus; Gordonia virus Bowser. |
DB of origin |
REFSEQ |
Length |
46570 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
67 |
%GC |
67.11 |
Number of singletons |
10 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009275609.1 | NC_030930_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32844 | 33623 |
| YP_009275614.1 | NC_030930_p47 | hypothetical protein | phrog_20407 | unknown function | unknown function | 1 | 34683 | 35102 |
| YP_009275625.1 | NC_030930_p58 | DnaQ-like exonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40743 | 41495 |
| YP_009275608.1 | NC_030930_p41 | DNA binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 32656 | 32847 |
| YP_009275577.1 | NC_030930_p10 | head-to-tail connector | phrog_8079 | neck protein | connector | 1 | 7208 | 7498 |
| YP_009275619.1 | NC_030930_p52 | hypothetical protein | phrog_8171 | unknown function | unknown function | 1 | 37812 | 38210 |
| YP_009275601.1 | NC_030930_p34 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27974 | 28333 |
| YP_009275585.1 | NC_030930_p18 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15695 | 16621 |
| YP_009275573.1 | NC_030930_p6 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 5198 | 6115 |
| YP_009275598.1 | NC_030930_p31 | lipase | singleton | unknown function | unknown function | -1 | 25970 | 26713 |
| YP_009275597.1 | NC_030930_p30 | lipase | phrog_8480 | lysophospholipase L1-like esterase | other | 1 | 24790 | 25980 |
| YP_009275620.1 | NC_030930_p53 | FtsK | phrog_12598 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 38207 | 39253 |
| YP_009275613.1 | NC_030930_p46 | hypothetical protein | phrog_15317 | unknown function | unknown function | 1 | 34379 | 34690 |
| YP_009275590.1 | NC_030930_p23 | hypothetical protein | phrog_4511 | unknown function | unknown function | 1 | 20442 | 20744 |
| YP_009275591.1 | NC_030930_p24 | hypothetical protein | phrog_17044 | unknown function | unknown function | 1 | 20744 | 20956 |
| YP_009275623.1 | NC_030930_p56 | hypothetical protein | phrog_31259 | unknown function | unknown function | 1 | 39908 | 40390 |
| YP_009275568.1 | NC_030930_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 176 | 550 |
| YP_009275602.1 | NC_030930_p35 | hypothetical protein | phrog_6153 | unknown function | unknown function | -1 | 28382 | 28606 |
| YP_009275605.1 | NC_030930_p38 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30321 | 30698 |
| YP_009275630.1 | NC_030930_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43880 | 44092 |
| YP_009275572.1 | NC_030930_p5 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4806 | 5168 |
| YP_009275569.1 | NC_030930_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 522 | 2105 |
| YP_009275617.1 | NC_030930_p50 | hypothetical protein | phrog_24063 | unknown function | unknown function | 1 | 35722 | 36102 |
| YP_009275603.1 | NC_030930_p36 | hypothetical protein | phrog_15183 | unknown function | unknown function | 1 | 28656 | 28976 |
| YP_009275576.1 | NC_030930_p9 | head-to-tail connector | phrog_501 | head closure Hc1 | connector | 1 | 6866 | 7201 |
| YP_009275589.1 | NC_030930_p22 | holin | phrog_443 | holin | lysis | 1 | 19954 | 20445 |
| YP_009275579.1 | NC_030930_p12 | major tail protein | phrog_10909 | major tail protein | tail | 1 | 7991 | 8833 |
| YP_009275634.1 | NC_030930_p67 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 46139 | 46477 |
| YP_009275574.1 | NC_030930_p7 | head-to-tail connector | phrog_2322 | head-tail connector protein | connector | 1 | 6112 | 6486 |
| YP_009275606.1 | NC_030930_p39 | integrase | phrog_1 | integrase | integration and excision | -1 | 30763 | 31647 |
| YP_009275588.1 | NC_030930_p21 | lysin A | phrog_2998 | endolysin | lysis | 1 | 18893 | 19924 |
| YP_009275595.1 | NC_030930_p28 | hypothetical protein | phrog_8055 | unknown function | unknown function | 1 | 23879 | 24208 |
| YP_009275622.1 | NC_030930_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39573 | 39911 |
| YP_009275615.1 | NC_030930_p48 | hypothetical protein | phrog_20805 | unknown function | unknown function | 1 | 35140 | 35427 |
| YP_009275583.1 | NC_030930_p16 | hypothetical protein | phrog_25082 | unknown function | unknown function | 1 | 10107 | 10541 |
| YP_009275592.1 | NC_030930_p25 | holin | phrog_3798 | unknown function | unknown function | 1 | 20957 | 21343 |
| YP_009275610.1 | NC_030930_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33620 | 33874 |
| YP_009275631.1 | NC_030930_p64 | hypothetical protein | phrog_16713 | unknown function | unknown function | 1 | 44312 | 45085 |
| YP_009275633.1 | NC_030930_p66 | HTH DNA binding domain protein | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 45894 | 46142 |
| YP_009275581.1 | NC_030930_p14 | hypothetical protein | phrog_17338 | tail assembly chaperone | tail | 1 | 9259 | 9681 |
| YP_009275580.1 | NC_030930_p13 | hypothetical protein | phrog_18254 | unknown function | unknown function | 1 | 8923 | 9234 |
| YP_009275629.1 | NC_030930_p62 | hypothetical protein | phrog_35289 | unknown function | unknown function | 1 | 43439 | 43810 |
| YP_009275618.1 | NC_030930_p51 | DNA binding domain protein | phrog_6218 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 36162 | 37667 |
| YP_009275594.1 | NC_030930_p27 | minor tail protein | phrog_737 | minor tail protein | tail | 1 | 22050 | 23882 |
| YP_009275612.1 | NC_030930_p45 | hypothetical protein | phrog_18626 | unknown function | unknown function | 1 | 34083 | 34382 |
| YP_009275578.1 | NC_030930_p11 | head-to-tail connector | phrog_6485 | tail terminator | connector | 1 | 7495 | 7893 |
| YP_009275628.1 | NC_030930_p61 | HNH endonuclease | phrog_15463 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42021 | 43442 |
| YP_009275627.1 | NC_030930_p60 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 41674 | 42021 |
| YP_009275632.1 | NC_030930_p65 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 45082 | 45783 |
| YP_009275621.1 | NC_030930_p54 | hypothetical protein | phrog_20160 | unknown function | unknown function | 1 | 39250 | 39576 |
| YP_009275571.1 | NC_030930_p4 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 3558 | 4802 |
| YP_009275600.1 | NC_030930_p33 | hypothetical protein | phrog_7805 | unknown function | unknown function | -1 | 27334 | 27903 |
| YP_009275604.1 | NC_030930_p37 | integrase | phrog_1 | integrase | integration and excision | 1 | 29401 | 30318 |
| YP_009275570.1 | NC_030930_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 2116 | 3561 |
| YP_009275586.1 | NC_030930_p19 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16618 | 18348 |
| YP_009275587.1 | NC_030930_p20 | hypothetical protein | phrog_22223 | unknown function | unknown function | 1 | 18345 | 18809 |
| YP_009275582.1 | NC_030930_p15 | hypothetical protein | phrog_5813 | tail assembly chaperone | tail | 1 | 9678 | 10091 |
| YP_009275611.1 | NC_030930_p44 | hypothetical protein | phrog_8218 | unknown function | unknown function | 1 | 33934 | 34086 |
| YP_009275599.1 | NC_030930_p32 | hypothetical protein | phrog_18591 | unknown function | unknown function | -1 | 26741 | 27301 |
| YP_009275607.1 | NC_030930_p40 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 32140 | 32553 |
| YP_009275596.1 | NC_030930_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24212 | 24787 |
| YP_009275584.1 | NC_030930_p17 | tape measure protein | phrog_4197 | tail length tape measure protein | tail | 1 | 10588 | 15702 |
| YP_009275616.1 | NC_030930_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35459 | 35722 |
| YP_009275624.1 | NC_030930_p57 | hypothetical protein | phrog_16850 | unknown function | unknown function | 1 | 40387 | 40746 |
| YP_009275593.1 | NC_030930_p26 | lysin B | phrog_102 | endolysin | lysis | 1 | 21340 | 22053 |
| YP_009275626.1 | NC_030930_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41492 | 41674 |
| YP_009275575.1 | NC_030930_p8 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6483 | 6866 |