Genomic map of Gordonia phage Gsput1 (NC_030932)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_030932
Definition
Gordonia phage Gsput1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gesputvirus; Gordonia virus Gsput1.
DB of origin
REFSEQ
Length
43505
Host Name
Gordonia sputi
Host domain
Bacteria
Is prophage?
undef
Number of proteins
71
%GC
62.83
Number of singletons
15
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009275742.1 NC_030932_p56 hypothetical protein phrog_1738 unknown function unknown function 1 38093 38275
YP_009275743.1 NC_030932_p57 phosphatase phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 38283 39401
YP_009275753.1 NC_030932_p67 hypothetical protein singleton unknown function unknown function 1 42303 42482
YP_009275705.1 NC_030932_p19 tail protein phrog_106 minor tail protein tail 1 14904 15749
YP_009275722.1 NC_030932_p36 hypothetical protein phrog_20128 unknown function unknown function 1 28403 28834
YP_009275704.1 NC_030932_p18 tape measure protein phrog_4197 tail length tape measure protein tail 1 10609 14904
YP_009275709.1 NC_030932_p23 hypothetical protein phrog_19139 unknown function unknown function 1 18403 18867
YP_009275732.1 NC_030932_p46 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 33194 34504
YP_009275702.1 NC_030932_p16 pre-TMP frameshift protein phrog_8183 tail assembly chaperone tail 1 9894 10591
YP_009275703.1 NC_030932_p17 pre-TMP frameshift protein phrog_5010 tail assembly chaperone tail 1 9894 10244
YP_009275721.1 NC_030932_p35 hypothetical protein singleton unknown function unknown function 1 28171 28320
YP_009275710.1 NC_030932_p24 hypothetical protein phrog_4120 minor tail protein tail 1 18864 19922
YP_009275723.1 NC_030932_p37 hypothetical protein phrog_19376 unknown function unknown function 1 28831 29070
YP_009275696.1 NC_030932_p10 hypothetical protein phrog_442 head-tail adaptor connector 1 7323 7862
YP_009275746.1 NC_030932_p60 hypothetical protein singleton unknown function unknown function 1 40139 40258
YP_009275748.1 NC_030932_p62 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 40603 40947
YP_009275741.1 NC_030932_p55 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 37586 37813
YP_009275690.1 NC_030932_p4 hypothetical protein phrog_10594 unknown function unknown function 1 1649 1978
YP_009275706.1 NC_030932_p20 hypothetical protein phrog_110 minor tail protein tail 1 15750 17078
YP_009275734.1 NC_030932_p48 endonuclease phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35124 35474
YP_009275749.1 NC_030932_p63 hypothetical protein phrog_20979 unknown function unknown function 1 40934 41092
YP_009275744.1 NC_030932_p58 hypothetical protein phrog_19391 unknown function unknown function 1 39429 39635
YP_009275708.1 NC_030932_p22 holin phrog_4316 unknown function unknown function 1 18136 18396
YP_009275751.1 NC_030932_p65 hypothetical protein phrog_1167 phosphofructokinase other 1 41393 42007
YP_009275724.1 NC_030932_p38 hypothetical protein singleton unknown function unknown function 1 29067 29330
YP_009275729.1 NC_030932_p43 hypothetical protein phrog_19039 unknown function unknown function 1 31851 32147
YP_009275737.1 NC_030932_p51 hypothetical protein phrog_19974 unknown function unknown function 1 35855 36355
YP_009275752.1 NC_030932_p66 hypothetical protein phrog_9751 unknown function unknown function 1 42004 42306
YP_009275728.1 NC_030932_p42 hypothetical protein phrog_1389 unknown function unknown function 1 31462 31854
YP_009275699.1 NC_030932_p13 hypothetical protein phrog_19684 unknown function unknown function 1 8489 8701
YP_009275725.1 NC_030932_p39 hypothetical protein phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 29451 30368
YP_009275707.1 NC_030932_p21 endolysin phrog_2998 endolysin lysis 1 17048 18142
YP_009275712.1 NC_030932_p26 hypothetical protein phrog_416 minor tail protein tail 1 21693 22775
YP_009275755.1 NC_030932_p69 hypothetical protein singleton unknown function unknown function 1 42621 42830
YP_009275720.1 NC_030932_p34 hypothetical protein singleton unknown function unknown function 1 27343 27729
YP_009275740.1 NC_030932_p54 hypothetical protein phrog_20479 unknown function unknown function 1 37265 37585
YP_009275730.1 NC_030932_p44 hypothetical protein phrog_14515 HNH endonuclease DNA, RNA and nucleotide metabolism 1 32260 32490
YP_009275697.1 NC_030932_p11 hypothetical protein phrog_501 head closure Hc1 connector 1 7862 8218
YP_009275687.1 NC_030932_p1 hypothetical protein singleton unknown function unknown function 1 149 307
YP_009275714.1 NC_030932_p28 integrase phrog_1 integrase integration and excision -1 23361 24542
YP_009275688.1 NC_030932_p2 hypothetical protein singleton unknown function unknown function -1 471 719
YP_009275698.1 NC_030932_p12 hypothetical protein phrog_5837 head closure Hc1 connector 1 8215 8484
YP_009275719.1 NC_030932_p33 DNA binding protein phrog_66 excisionase and transcriptional regulator integration and excision 1 27090 27284
YP_009275689.1 NC_030932_p3 lysin B phrog_6187 unknown function unknown function 1 1005 1634
YP_009275756.1 NC_030932_p70 hypothetical protein singleton unknown function unknown function 1 42827 43000
YP_009275745.1 NC_030932_p59 hypothetical protein singleton unknown function unknown function 1 39616 40152
YP_009275750.1 NC_030932_p64 hypothetical protein singleton unknown function unknown function 1 41089 41247
YP_009275716.1 NC_030932_p30 heat shock protein phrog_32167 unknown function unknown function 1 24935 25768
YP_009275757.1 NC_030932_p71 hypothetical protein singleton unknown function unknown function 1 43223 43483
YP_009275739.1 NC_030932_p53 hypothetical protein phrog_20602 DNA binding protein DNA, RNA and nucleotide metabolism 1 36846 37109
YP_009275731.1 NC_030932_p45 hypothetical protein phrog_270 replication initiation protein DNA, RNA and nucleotide metabolism 1 32516 33187
YP_009275726.1 NC_030932_p40 hypothetical protein phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism 1 30337 30849
YP_009275715.1 NC_030932_p29 DNA binding protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 24547 24849
YP_009275736.1 NC_030932_p50 hypothetical protein singleton unknown function unknown function 1 35671 35868
YP_009275692.1 NC_030932_p6 portal protein phrog_12 portal protein head and packaging 1 3629 4933
YP_009275754.1 NC_030932_p68 hypothetical protein singleton unknown function unknown function 1 42469 42624
YP_009275691.1 NC_030932_p5 TerL phrog_9 terminase large subunit head and packaging 1 1941 3626
YP_009275693.1 NC_030932_p7 prohead protease phrog_80 head maturation protease head and packaging 1 4923 5735
YP_009275694.1 NC_030932_p8 capsid protein phrog_10 major head protein head and packaging 1 5827 7071
YP_009275735.1 NC_030932_p49 hypothetical protein phrog_20343 unknown function unknown function 1 35471 35674
YP_009275747.1 NC_030932_p61 hypothetical protein phrog_2596 unknown function unknown function 1 40315 40578
YP_009275695.1 NC_030932_p9 hypothetical protein singleton unknown function unknown function 1 7154 7360
YP_009275717.1 NC_030932_p31 hypothetical protein phrog_18889 unknown function unknown function -1 25835 26551
YP_009275711.1 NC_030932_p25 galactose binding protein phrog_3493 minor tail protein tail 1 19933 21690
YP_009275701.1 NC_030932_p15 hypothetical protein phrog_117 major tail protein tail 1 9141 9716
YP_009275700.1 NC_030932_p14 hypothetical protein phrog_123 tail terminator connector 1 8688 9059
YP_009275733.1 NC_030932_p47 DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 34521 34976
YP_009275718.1 NC_030932_p32 DNA binding protein phrog_9103 transcriptional repressor transcription regulation 1 26815 27093
YP_009275713.1 NC_030932_p27 hypothetical protein phrog_240 head protein head and packaging 1 22779 23123
YP_009275738.1 NC_030932_p52 HNH endonuclease phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 36371 36856
YP_009275727.1 NC_030932_p41 DNA recombination protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30846 31469