| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_030942 |
Definition |
Gordonia phage BritBrat, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Britbratvirus; Gordonia virus Britbrat. |
DB of origin |
REFSEQ |
Length |
55524 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
98 |
%GC |
64.99 |
Number of singletons |
29 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009276565.1 | NC_030942_p38 | hypothetical protein | phrog_5316 | unknown function | unknown function | -1 | 32899 | 33111 |
| YP_009276545.1 | NC_030942_p18 | tape measure protein | phrog_10780 | tail length tape measure protein | tail | 1 | 11003 | 16657 |
| YP_009276529.1 | NC_030942_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 485 | 2284 |
| YP_009276556.1 | NC_030942_p29 | tail spike-like protein | singleton | unknown function | unknown function | 1 | 24575 | 26977 |
| YP_009276573.1 | NC_030942_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35690 | 35965 |
| YP_009276542.1 | NC_030942_p15 | tail assembly chaperone | phrog_28033 | tail assembly chaperone | tail | 1 | 9689 | 10503 |
| YP_009276537.1 | NC_030942_p10 | head-to-tail connector | phrog_763 | head-tail adaptor | connector | 1 | 7484 | 7831 |
| YP_009276555.1 | NC_030942_p28 | hypothetical protein | phrog_2689 | minor tail protein | tail | 1 | 22623 | 24575 |
| YP_009276603.1 | NC_030942_p76 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 47469 | 48248 |
| YP_009276617.1 | NC_030942_p90 | hypothetical protein | phrog_29686 | unknown function | unknown function | 1 | 52231 | 52560 |
| YP_009276608.1 | NC_030942_p81 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49264 | 49383 |
| YP_009276562.1 | NC_030942_p35 | hypothetical protein | phrog_17722 | unknown function | unknown function | 1 | 30625 | 30804 |
| YP_009276607.1 | NC_030942_p80 | hypothetical protein | phrog_16479 | unknown function | unknown function | 1 | 48998 | 49264 |
| YP_009276530.1 | NC_030942_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2281 | 3735 |
| YP_009276590.1 | NC_030942_p63 | DnaJ-like central domain | singleton | unknown function | unknown function | 1 | 42424 | 42561 |
| YP_009276551.1 | NC_030942_p24 | hypothetical protein | phrog_4511 | unknown function | unknown function | 1 | 21040 | 21339 |
| YP_009276571.1 | NC_030942_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35074 | 35397 |
| YP_009276615.1 | NC_030942_p88 | hypothetical protein | phrog_35961 | unknown function | unknown function | 1 | 51555 | 51803 |
| YP_009276549.1 | NC_030942_p22 | lysin A | phrog_2998 | endolysin | lysis | 1 | 19678 | 20778 |
| YP_009276594.1 | NC_030942_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44338 | 44640 |
| YP_009276552.1 | NC_030942_p25 | hypothetical protein | phrog_17044 | unknown function | unknown function | 1 | 21339 | 21533 |
| YP_009276578.1 | NC_030942_p51 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 37037 | 37918 |
| YP_009276625.1 | NC_030942_p98 | HNH endonuclease domain protein | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55168 | 55455 |
| YP_009276546.1 | NC_030942_p19 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16661 | 17569 |
| YP_009276583.1 | NC_030942_p56 | methyltransferase | phrog_111 | DNA methyltransferase | other | 1 | 39573 | 40124 |
| YP_009276572.1 | NC_030942_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35394 | 35693 |
| YP_009276618.1 | NC_030942_p91 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52670 | 52975 |
| YP_009276621.1 | NC_030942_p94 | hypothetical protein | phrog_24257 | unknown function | unknown function | 1 | 53599 | 53808 |
| YP_009276568.1 | NC_030942_p41 | CRO protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34303 | 34614 |
| YP_009276584.1 | NC_030942_p57 | hypothetical protein | phrog_2857 | tail fiber protein | tail | 1 | 40297 | 40608 |
| YP_009276589.1 | NC_030942_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42233 | 42427 |
| YP_009276554.1 | NC_030942_p27 | lysin B | phrog_102 | endolysin | lysis | 1 | 21883 | 22626 |
| YP_009276588.1 | NC_030942_p61 | AAA ATPase | phrog_1366 | unknown function | unknown function | 1 | 41289 | 42236 |
| YP_009276586.1 | NC_030942_p59 | hypothetical protein | phrog_37464 | unknown function | unknown function | 1 | 40775 | 41077 |
| YP_009276580.1 | NC_030942_p53 | hypothetical protein | phrog_34964 | unknown function | unknown function | 1 | 38133 | 38363 |
| YP_009276536.1 | NC_030942_p9 | head-to-tail connector | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 7086 | 7487 |
| YP_009276592.1 | NC_030942_p65 | HTH DNA binding domain protein | phrog_1590 | unknown function | unknown function | 1 | 43022 | 43852 |
| YP_009276587.1 | NC_030942_p60 | hypothetical protein | phrog_26188 | unknown function | unknown function | 1 | 41074 | 41292 |
| YP_009276547.1 | NC_030942_p20 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17542 | 19272 |
| YP_009276561.1 | NC_030942_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30183 | 30434 |
| YP_009276532.1 | NC_030942_p5 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 4577 | 5260 |
| YP_009276567.1 | NC_030942_p40 | immunity repressor | phrog_6288 | unknown function | unknown function | -1 | 33591 | 34130 |
| YP_009276528.1 | NC_030942_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 82 | 504 |
| YP_009276559.1 | NC_030942_p32 | DNA binding domain protein | singleton | unknown function | unknown function | -1 | 29508 | 29792 |
| YP_009276540.1 | NC_030942_p13 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 8269 | 8655 |
| YP_009276610.1 | NC_030942_p83 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49751 | 50095 |
| YP_009276553.1 | NC_030942_p26 | membrane protein | phrog_3798 | unknown function | unknown function | 1 | 21533 | 21913 |
| YP_009276620.1 | NC_030942_p93 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53375 | 53602 |
| YP_009276548.1 | NC_030942_p21 | hypothetical protein | phrog_17401 | unknown function | unknown function | 1 | 19272 | 19610 |
| YP_009276543.1 | NC_030942_p16 | tail assembly chaperone | phrog_23607 | tail assembly chaperone | tail | 1 | 9689 | 10096 |
| YP_009276531.1 | NC_030942_p4 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 3716 | 4528 |
| YP_009276613.1 | NC_030942_p86 | HNH endonuclease | phrog_2118 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 50390 | 50797 |
| YP_009276557.1 | NC_030942_p30 | O-acetyltransferase domain protein | phrog_6705 | O-antigen acetylase | moron, auxiliary metabolic gene and host takeover | 1 | 27117 | 29243 |
| YP_009276614.1 | NC_030942_p87 | helix-turn-helix DNA binding domain protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 50794 | 51558 |
| YP_009276579.1 | NC_030942_p52 | MerR-like transcriptional regulator | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 37915 | 38136 |
| YP_009276581.1 | NC_030942_p54 | hypothetical protein | phrog_20769 | unknown function | unknown function | 1 | 38360 | 39325 |
| YP_009276577.1 | NC_030942_p50 | hypothetical protein | phrog_12920 | unknown function | unknown function | 1 | 36655 | 36975 |
| YP_009276570.1 | NC_030942_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34871 | 35077 |
| YP_009276601.1 | NC_030942_p74 | hypothetical protein | phrog_1138 | unknown function | unknown function | 1 | 46520 | 46924 |
| YP_009276599.1 | NC_030942_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45785 | 46360 |
| YP_009276560.1 | NC_030942_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29905 | 30036 |
| YP_009276602.1 | NC_030942_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46921 | 47472 |
| YP_009276585.1 | NC_030942_p58 | hypothetical protein | phrog_35585 | unknown function | unknown function | 1 | 40605 | 40778 |
| YP_009276623.1 | NC_030942_p96 | helix-turn-helix domain protein | phrog_908 | unknown function | unknown function | 1 | 54041 | 54766 |
| YP_009276624.1 | NC_030942_p97 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54941 | 55171 |
| YP_009276604.1 | NC_030942_p77 | hypothetical protein | phrog_7793 | unknown function | unknown function | 1 | 48245 | 48370 |
| YP_009276533.1 | NC_030942_p6 | head decoration protein | phrog_3583 | head decoration | head and packaging | 1 | 5309 | 5692 |
| YP_009276541.1 | NC_030942_p14 | major tail protein | phrog_117 | major tail protein | tail | 1 | 8717 | 9562 |
| YP_009276566.1 | NC_030942_p39 | metallopeptidase domain protein | phrog_87 | metallo-protease | other | -1 | 33108 | 33527 |
| YP_009276539.1 | NC_030942_p12 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 8015 | 8272 |
| YP_009276622.1 | NC_030942_p95 | hypothetical protein | phrog_24327 | unknown function | unknown function | 1 | 53805 | 54044 |
| YP_009276576.1 | NC_030942_p49 | HTH DNA binding domain protein | phrog_6962 | unknown function | unknown function | 1 | 36437 | 36658 |
| YP_009276593.1 | NC_030942_p66 | HNH endonuclease domain protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43849 | 44178 |
| YP_009276564.1 | NC_030942_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32498 | 32902 |
| YP_009276544.1 | NC_030942_p17 | hypothetical protein | phrog_19756 | unknown function | unknown function | -1 | 10500 | 10955 |
| YP_009276575.1 | NC_030942_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36168 | 36440 |
| YP_009276534.1 | NC_030942_p7 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 5706 | 6746 |
| YP_009276558.1 | NC_030942_p31 | hypothetical protein | phrog_6153 | unknown function | unknown function | -1 | 29275 | 29502 |
| YP_009276595.1 | NC_030942_p68 | hypothetical protein | phrog_8105 | unknown function | unknown function | 1 | 44637 | 44939 |
| YP_009276600.1 | NC_030942_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46357 | 46527 |
| YP_009276598.1 | NC_030942_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45651 | 45788 |
| YP_009276550.1 | NC_030942_p23 | membrane protein | phrog_443 | holin | lysis | 1 | 20804 | 21043 |
| YP_009276606.1 | NC_030942_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48769 | 48927 |
| YP_009276612.1 | NC_030942_p85 | hypothetical protein | phrog_6976 | unknown function | unknown function | 1 | 50226 | 50390 |
| YP_009276619.1 | NC_030942_p92 | hypothetical protein | phrog_1667 | unknown function | unknown function | 1 | 52968 | 53378 |
| YP_009276563.1 | NC_030942_p36 | integrase | phrog_1 | integrase | integration and excision | 1 | 31287 | 32501 |
| YP_009276591.1 | NC_030942_p64 | WhiB-like regulatory protein | singleton | unknown function | unknown function | 1 | 42558 | 43025 |
| YP_009276616.1 | NC_030942_p89 | resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 51800 | 52234 |
| YP_009276538.1 | NC_030942_p11 | hypothetical protein | phrog_31765 | unknown function | unknown function | 1 | 7828 | 8031 |
| YP_009276605.1 | NC_030942_p78 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48370 | 48717 |
| YP_009276597.1 | NC_030942_p70 | DNA methylase | phrog_111 | DNA methyltransferase | other | 1 | 45136 | 45654 |
| YP_009276596.1 | NC_030942_p69 | hypothetical protein | phrog_26108 | unknown function | unknown function | 1 | 44942 | 45142 |
| YP_009276611.1 | NC_030942_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50092 | 50229 |
| YP_009276582.1 | NC_030942_p55 | hypothetical protein | phrog_7723 | unknown function | unknown function | 1 | 39331 | 39576 |
| YP_009276535.1 | NC_030942_p8 | hypothetical protein | phrog_14250 | unknown function | unknown function | 1 | 6761 | 7117 |
| YP_009276569.1 | NC_030942_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34611 | 34874 |
| YP_009276574.1 | NC_030942_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35962 | 36165 |
| YP_009276609.1 | NC_030942_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49380 | 49751 |