Genomic map of Gordonia phage Blueberry (NC_030943)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_030943
Definition
Gordonia phage Blueberry, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
54990
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
86
%GC
67.03
Number of singletons
9
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009276686.1 NC_030943_p61 hypothetical protein phrog_26600 unknown function unknown function 1 42019 42672
YP_009276666.1 NC_030943_p41 immunity repressor phrog_1373 transcriptional regulator transcription regulation -1 32854 33240
YP_009276700.1 NC_030943_p75 hypothetical protein phrog_2857 tail fiber protein tail 1 47848 48144
YP_009276709.1 NC_030943_p84 transposase phrog_157 transposase integration and excision -1 52807 53769
YP_009276642.1 NC_030943_p17 tail assembly chaperone phrog_8183 tail assembly chaperone tail 1 9765 10549
YP_009276683.1 NC_030943_p58 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 39736 40665
YP_009276647.1 NC_030943_p22 lysin A phrog_1512 endolysin lysis 1 18628 19335
YP_009276671.1 NC_030943_p46 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 35195 35956
YP_009276692.1 NC_030943_p67 nucleotidyltransferase phrog_388 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 44110 44895
YP_009276664.1 NC_030943_p39 peptidase phrog_87 metallo-protease other -1 31970 32407
YP_009276675.1 NC_030943_p50 hypothetical protein phrog_11014 unknown function unknown function 1 36808 37176
YP_009276689.1 NC_030943_p64 hypothetical protein phrog_33336 unknown function unknown function 1 43417 43827
YP_009276648.1 NC_030943_p23 lysin A phrog_3084 endolysin lysis 1 19335 20246
YP_009276640.1 NC_030943_p15 head-to-tail connector protein phrog_123 tail terminator connector 1 8498 8917
YP_009276703.1 NC_030943_p78 hypothetical protein phrog_11256 DNA binding protein DNA, RNA and nucleotide metabolism 1 48841 50049
YP_009276668.1 NC_030943_p43 hypothetical protein phrog_6288 unknown function unknown function -1 33832 34560
YP_009276651.1 NC_030943_p26 membrane protein phrog_10261 membrane protein moron, auxiliary metabolic gene and host takeover 1 21012 21470
YP_009276705.1 NC_030943_p80 hypothetical protein phrog_12987 DNA binding protein DNA, RNA and nucleotide metabolism 1 50627 50842
YP_009276634.1 NC_030943_p9 head-to-tail connector protein phrog_501 head closure Hc1 connector 1 6835 7194
YP_009276636.1 NC_030943_p11 hypothetical protein phrog_16006 unknown function unknown function 1 7396 7596
YP_009276685.1 NC_030943_p60 hypothetical protein phrog_8105 unknown function unknown function 1 41720 42022
YP_009276638.1 NC_030943_p13 head-to-tail connector protein phrog_9658 head-tail connector protein connector 1 7934 8221
YP_009276637.1 NC_030943_p12 hypothetical protein singleton unknown function unknown function 1 7602 7937
YP_009276665.1 NC_030943_p40 DNA helicase domain protein singleton unknown function unknown function -1 32438 32857
YP_009276697.1 NC_030943_p72 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46202 46618
YP_009276654.1 NC_030943_p29 minor tail protein phrog_4120 minor tail protein tail 1 22628 23695
YP_009276690.1 NC_030943_p65 hypothetical protein phrog_10784 membrane protein moron, auxiliary metabolic gene and host takeover 1 43833 44018
YP_009276631.1 NC_030943_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5041 5970
YP_009276698.1 NC_030943_p73 hypothetical protein phrog_10260 unknown function unknown function 1 46615 46773
YP_009276699.1 NC_030943_p74 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 46763 47851
YP_009276678.1 NC_030943_p53 hypothetical protein phrog_9981 unknown function unknown function 1 37912 38094
YP_009276652.1 NC_030943_p27 lysin B phrog_102 endolysin lysis 1 21464 22264
YP_009276672.1 NC_030943_p47 hypothetical protein phrog_8218 unknown function unknown function 1 36031 36195
YP_009276681.1 NC_030943_p56 hypothetical protein phrog_572 unknown function unknown function 1 38796 39152
YP_009276688.1 NC_030943_p63 hypothetical protein phrog_27040 unknown function unknown function 1 42848 43417
YP_009276711.1 NC_030943_p86 hypothetical protein phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 54538 54906
YP_009276695.1 NC_030943_p70 hypothetical protein phrog_13233 unknown function unknown function 1 45529 45840
YP_009276684.1 NC_030943_p59 ssDNA binding protein phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 40662 41723
YP_009276696.1 NC_030943_p71 hypothetical protein phrog_464 unknown function unknown function 1 45837 46205
YP_009276660.1 NC_030943_p35 hypothetical protein phrog_6153 unknown function unknown function -1 28799 28987
YP_009276663.1 NC_030943_p38 HTH DNA binding domain protein phrog_5316 unknown function unknown function -1 31768 31977
YP_009276632.1 NC_030943_p7 head-to-tail connector protein phrog_2322 head-tail connector protein connector 1 5967 6446
YP_009276691.1 NC_030943_p66 hypothetical protein singleton unknown function unknown function 1 44015 44113
YP_009276682.1 NC_030943_p57 DnaQ-like exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 39149 39736
YP_009276669.1 NC_030943_p44 CRO protein phrog_6463 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 34807 35028
YP_009276676.1 NC_030943_p51 hypothetical protein phrog_19919 unknown function unknown function 1 37173 37583
YP_009276641.1 NC_030943_p16 major tail protein phrog_117 major tail protein tail 1 9023 9661
YP_009276673.1 NC_030943_p48 hypothetical protein phrog_9588 unknown function unknown function 1 36192 36512
YP_009276633.1 NC_030943_p8 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 6443 6835
YP_009276693.1 NC_030943_p68 hypothetical protein phrog_11360 unknown function unknown function 1 44892 45110
YP_009276658.1 NC_030943_p33 hypothetical protein phrog_35313 unknown function unknown function 1 26343 27590
YP_009276639.1 NC_030943_p14 head-to-tail connector phrog_5837 head closure Hc1 connector 1 8214 8501
YP_009276627.1 NC_030943_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 361 1959
YP_009276650.1 NC_030943_p25 membrane protein phrog_11800 membrane protein moron, auxiliary metabolic gene and host takeover 1 20771 21025
YP_009276646.1 NC_030943_p21 minor tail protein phrog_110 minor tail protein tail 1 16962 18611
YP_009276661.1 NC_030943_p36 hypothetical protein phrog_12638 unknown function unknown function -1 29378 30241
YP_009276626.1 NC_030943_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 57 392
YP_009276659.1 NC_030943_p34 HNH endonuclease domain protein phrog_38451 unknown function unknown function -1 27587 28546
YP_009276701.1 NC_030943_p76 hypothetical protein phrog_780 unknown function unknown function 1 48141 48380
YP_009276630.1 NC_030943_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4627 5037
YP_009276655.1 NC_030943_p30 minor tail protein phrog_737 minor tail protein tail 1 23695 25212
YP_009276645.1 NC_030943_p20 minor tail protein phrog_106 minor tail protein tail 1 16105 16965
YP_009276694.1 NC_030943_p69 hypothetical protein phrog_12575 unknown function unknown function 1 45107 45532
YP_009276662.1 NC_030943_p37 integrase phrog_95 integrase integration and excision 1 30375 31766
YP_009276687.1 NC_030943_p62 hypothetical protein singleton unknown function unknown function 1 42669 42851
YP_009276635.1 NC_030943_p10 hypothetical protein singleton unknown function unknown function 1 7203 7403
YP_009276629.1 NC_030943_p4 capsid maturation protease phrog_2976 head maturation protease head and packaging 1 3338 4624
YP_009276706.1 NC_030943_p81 hypothetical protein singleton unknown function unknown function 1 50844 51089
YP_009276710.1 NC_030943_p85 transposase phrog_151 transposase integration and excision -1 53772 54089
YP_009276649.1 NC_030943_p24 membrane protein phrog_443 holin lysis 1 20249 20710
YP_009276656.1 NC_030943_p31 hypothetical protein phrog_8055 unknown function unknown function 1 25209 25544
YP_009276674.1 NC_030943_p49 hypothetical protein phrog_9909 unknown function unknown function 1 36509 36811
YP_009276643.1 NC_030943_p18 tail assembly chaperone phrog_5010 tail assembly chaperone tail 1 9765 10175
YP_009276628.1 NC_030943_p3 portal protein phrog_113 portal protein head and packaging 1 1974 3338
YP_009276677.1 NC_030943_p52 hypothetical protein phrog_5984 unknown function unknown function 1 37580 37915
YP_009276653.1 NC_030943_p28 hypothetical protein phrog_9406 unknown function unknown function 1 22261 22635
YP_009276680.1 NC_030943_p55 hypothetical protein phrog_6877 unknown function unknown function 1 38455 38799
YP_009276707.1 NC_030943_p82 DNA binding domain protein phrog_908 unknown function unknown function 1 51089 51874
YP_009276704.1 NC_030943_p79 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 50046 50630
YP_009276702.1 NC_030943_p77 hypothetical protein phrog_20666 unknown function unknown function 1 48377 48844
YP_009276679.1 NC_030943_p54 hypothetical protein singleton unknown function unknown function 1 38102 38458
YP_009276657.1 NC_030943_p32 minor tail protein phrog_25765 minor tail protein tail 1 25537 26340
YP_009276644.1 NC_030943_p19 tape measure protein phrog_4197 tail length tape measure protein tail 1 10619 16108
YP_009276708.1 NC_030943_p83 hypothetical protein singleton unknown function unknown function 1 51871 52428
YP_009276667.1 NC_030943_p42 hypothetical protein singleton unknown function unknown function -1 33305 33835
YP_009276670.1 NC_030943_p45 hypothetical protein phrog_15107 unknown function unknown function 1 35025 35198