Genomic map of Gordonia phage Demosthenes (NC_030944)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_030944
Definition
Gordonia phage Demosthenes, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Demosthenesvirus.
DB of origin
REFSEQ
Length
74073
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
59.25
Number of singletons
4
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009276733.1 NC_030944_p22 head-to-tail connector protein phrog_23445 head-tail connector protein connector 1 20308 20736
YP_009276781.1 NC_030944_p70 hypothetical protein phrog_6646 unknown function unknown function -1 59967 60413
YP_009276770.1 NC_030944_p59 hypothetical protein phrog_7044 unknown function unknown function -1 54920 55228
YP_009276713.1 NC_030944_p2 hypothetical protein phrog_7062 unknown function unknown function -1 2818 3135
YP_009276805.1 NC_030944_p94 hypothetical protein phrog_17922 unknown function unknown function -1 72438 72740
YP_009276803.1 NC_030944_p92 hypothetical protein phrog_26269 unknown function unknown function -1 71933 72094
YP_009276767.1 NC_030944_p56 hypothetical protein phrog_7649 unknown function unknown function -1 52784 53365
YP_009276795.1 NC_030944_p84 hypothetical protein phrog_24128 unknown function unknown function -1 68992 69318
YP_009276790.1 NC_030944_p79 AAA ATPase phrog_5424 ATPase other -1 64853 66400
YP_009276751.1 NC_030944_p40 hypothetical protein phrog_6890 endonuclease DNA, RNA and nucleotide metabolism -1 44226 44678
YP_009276750.1 NC_030944_p39 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation -1 44014 44214
YP_009276718.1 NC_030944_p7 hypothetical protein phrog_7609 unknown function unknown function -1 5850 6248
YP_009276763.1 NC_030944_p52 HTH DNA binding domain protein phrog_10045 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 50443 50598
YP_009276782.1 NC_030944_p71 hypothetical protein phrog_27073 unknown function unknown function -1 60579 61052
YP_009276728.1 NC_030944_p17 head-to-tail connector protein phrog_7074 head-tail connector protein connector 1 18221 18412
YP_009276716.1 NC_030944_p5 hypothetical protein phrog_27754 unknown function unknown function -1 5482 5649
YP_009276762.1 NC_030944_p51 exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 49796 50446
YP_009276791.1 NC_030944_p80 hypothetical protein phrog_7008 unknown function unknown function -1 66466 67080
YP_009276797.1 NC_030944_p86 hypothetical protein phrog_13875 unknown function unknown function -1 69421 69564
YP_009276802.1 NC_030944_p91 hypothetical protein phrog_6708 unknown function unknown function -1 70803 71738
YP_009276755.1 NC_030944_p44 nucleotide pyrophosphohydrolase phrog_3301 pyrophosphatase other -1 46431 46925
YP_009276794.1 NC_030944_p83 hypothetical protein phrog_889 unknown function unknown function -1 68387 68995
YP_009276758.1 NC_030944_p47 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 47929 48399
YP_009276799.1 NC_030944_p88 hypothetical protein singleton unknown function unknown function -1 69841 70158
YP_009276777.1 NC_030944_p66 hypothetical protein phrog_5406 unknown function unknown function -1 58044 58802
YP_009276746.1 NC_030944_p35 membrane protein phrog_2272 unknown function unknown function 1 41362 41814
YP_009276765.1 NC_030944_p54 hypothetical protein phrog_22291 unknown function unknown function -1 50838 51077
YP_009276779.1 NC_030944_p68 hypothetical protein phrog_25312 unknown function unknown function -1 59221 59472
YP_009276730.1 NC_030944_p19 head-to-tail connector protein phrog_195 head-tail adaptor connector 1 18800 19300
YP_009276772.1 NC_030944_p61 hypothetical protein phrog_6792 unknown function unknown function -1 55850 56374
YP_009276743.1 NC_030944_p32 hypothetical protein phrog_6901 unknown function unknown function 1 39535 39861
YP_009276744.1 NC_030944_p33 lysin A phrog_880 endolysin lysis 1 39858 40499
YP_009276742.1 NC_030944_p31 membrane protein phrog_565 holin lysis 1 39018 39470
YP_009276727.1 NC_030944_p16 major capsid protein phrog_29 major head protein head and packaging 1 16969 18183
YP_009276715.1 NC_030944_p4 hypothetical protein phrog_7096 unknown function unknown function -1 5271 5474
YP_009276768.1 NC_030944_p57 hypothetical protein phrog_5686 unknown function unknown function -1 53451 54494
YP_009276719.1 NC_030944_p8 DNA primase phrog_5362 DNA primase DNA, RNA and nucleotide metabolism -1 6245 7117
YP_009276761.1 NC_030944_p50 hypothetical protein phrog_9572 sulfatase-modifying factor enzyme other -1 49539 49796
YP_009276748.1 NC_030944_p37 membrane protein phrog_9090 membrane protein moron, auxiliary metabolic gene and host takeover 1 42266 42661
YP_009276804.1 NC_030944_p93 hypothetical protein phrog_23086 unknown function unknown function -1 72098 72433
YP_009276785.1 NC_030944_p74 hypothetical protein phrog_10140 unknown function unknown function -1 61964 62215
YP_009276778.1 NC_030944_p67 hypothetical protein phrog_27627 unknown function unknown function -1 58802 59221
YP_009276726.1 NC_030944_p15 scaffolding protein phrog_5455 head decoration head and packaging 1 16489 16956
YP_009276792.1 NC_030944_p81 hypothetical protein phrog_7001 unknown function unknown function -1 67080 67538
YP_009276783.1 NC_030944_p72 HNH endonuclease phrog_9508 HNH endonuclease DNA, RNA and nucleotide metabolism -1 61157 61693
YP_009276774.1 NC_030944_p63 hypothetical protein phrog_22468 unknown function unknown function -1 56654 57517
YP_009276769.1 NC_030944_p58 hypothetical protein phrog_6746 unknown function unknown function -1 54604 54927
YP_009276760.1 NC_030944_p49 DNA polymerase III beta subunit phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 48449 49561
YP_009276796.1 NC_030944_p85 hypothetical protein phrog_10987 unknown function unknown function -1 69311 69424
YP_009276800.1 NC_030944_p89 hypothetical protein phrog_22496 unknown function unknown function -1 70171 70494
YP_009276752.1 NC_030944_p41 hypothetical protein phrog_15162 membrane protein moron, auxiliary metabolic gene and host takeover -1 44765 44878
YP_009276721.1 NC_030944_p10 terminase large subunit phrog_2 terminase large subunit head and packaging 1 8696 10672
YP_009276731.1 NC_030944_p20 head-to-tail connector protein phrog_26 tail completion or Neck1 protein connector 1 19288 19803
YP_009276757.1 NC_030944_p46 RusA-like ribonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 47396 47932
YP_009276741.1 NC_030944_p30 hypothetical protein phrog_8373 unknown function unknown function 1 38739 38969
YP_009276766.1 NC_030944_p55 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 51074 52768
YP_009276739.1 NC_030944_p28 minor tail protein phrog_1887 tail protein tail 1 34507 36762
YP_009276771.1 NC_030944_p60 hypothetical protein phrog_6622 unknown function unknown function -1 55231 55887
YP_009276720.1 NC_030944_p9 terminase small subunit phrog_6902 terminase small subunit head and packaging 1 7302 8699
YP_009276736.1 NC_030944_p25 tail assembly chaperone phrog_3096 tail assembly chaperone tail 1 21863 22462
YP_009276780.1 NC_030944_p69 hypothetical protein phrog_7690 unknown function unknown function -1 59479 59871
YP_009276749.1 NC_030944_p38 RecB-like exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42805 44010
YP_009276754.1 NC_030944_p43 lysin B phrog_102 endolysin lysis -1 45593 46429
YP_009276732.1 NC_030944_p21 head-to-tail connector protein phrog_5299 unknown function unknown function 1 19803 20294
YP_009276793.1 NC_030944_p82 hypothetical protein phrog_6032 unknown function unknown function -1 67542 68342
YP_009276759.1 NC_030944_p48 hypothetical protein phrog_36456 unknown function unknown function -1 48294 48452
YP_009276717.1 NC_030944_p6 hypothetical protein phrog_12599 unknown function unknown function -1 5627 5860
YP_009276734.1 NC_030944_p23 major tail protein phrog_290 minor tail protein tail 1 20740 21759
YP_009276806.1 NC_030944_p95 hypothetical protein phrog_24747 unknown function unknown function -1 72809 73291
YP_009276745.1 NC_030944_p34 lysin A phrog_6985 endolysin lysis 1 40496 41359
YP_009276775.1 NC_030944_p64 hypothetical protein phrog_18683 unknown function unknown function -1 57528 57869
YP_009276773.1 NC_030944_p62 hypothetical protein phrog_6495 unknown function unknown function -1 56376 56645
YP_009276784.1 NC_030944_p73 hypothetical protein phrog_4480 unknown function unknown function -1 61680 61967
YP_009276801.1 NC_030944_p90 hypothetical protein phrog_10234 unknown function unknown function -1 70496 70666
YP_009276786.1 NC_030944_p75 hypothetical protein singleton unknown function unknown function -1 62226 62579
YP_009276788.1 NC_030944_p77 hypothetical protein singleton unknown function unknown function -1 64604 64687
YP_009276737.1 NC_030944_p26 tape measure protein phrog_5448 tail length tape measure protein tail 1 22860 31946
YP_009276714.1 NC_030944_p3 DNA binding domain protein phrog_5311 helicase DNA, RNA and nucleotide metabolism -1 3137 5278
YP_009276723.1 NC_030944_p12 tail fiber protein phrog_9707 tail protein tail 1 12512 14905
YP_009276738.1 NC_030944_p27 minor tail protein phrog_5287 minor tail protein tail 1 31943 34507
YP_009276722.1 NC_030944_p11 portal protein phrog_113 portal protein head and packaging 1 10786 12525
YP_009276729.1 NC_030944_p18 head-to-tail connector protein phrog_6879 head-tail connector protein connector 1 18500 18790
YP_009276725.1 NC_030944_p14 capsid maturation protease phrog_976 head maturation protease head and packaging 1 15250 16446
YP_009276740.1 NC_030944_p29 minor tail protein phrog_4978 tail protein tail 1 36740 38725
YP_009276764.1 NC_030944_p53 hypothetical protein phrog_22895 unknown function unknown function -1 50582 50827
YP_009276776.1 NC_030944_p65 hypothetical protein singleton unknown function unknown function -1 57874 58047
YP_009276753.1 NC_030944_p42 DNA methylase phrog_67 DNA methyltransferase other -1 44875 45591
YP_009276787.1 NC_030944_p76 cobalamin biosynthesis protein phrog_5298 cobalamin biosynthesis protein moron, auxiliary metabolic gene and host takeover -1 62583 64604
YP_009276735.1 NC_030944_p24 tail assembly chaperone phrog_3096 tail assembly chaperone tail 1 21863 22746
YP_009276756.1 NC_030944_p45 hypothetical protein phrog_23068 unknown function unknown function -1 46926 47399
YP_009276747.1 NC_030944_p36 membrane protein phrog_5552 membrane protein moron, auxiliary metabolic gene and host takeover 1 41831 42256
YP_009276724.1 NC_030944_p13 hypothetical protein phrog_6679 unknown function unknown function 1 14928 15236
YP_009276798.1 NC_030944_p87 hypothetical protein phrog_26243 unknown function unknown function -1 69561 69869
YP_009276712.1 NC_030944_p1 hypothetical protein phrog_24029 unknown function unknown function -1 1865 2818
YP_009276789.1 NC_030944_p78 hypothetical protein phrog_24702 unknown function unknown function -1 64680 64853