Genomic map of Gordonia phage Terapin (NC_031001)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031001
Definition
Gordonia phage Terapin, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Terapinvirus; Gordonia virus Terapin.
DB of origin
REFSEQ
Length
66611
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
97
%GC
59.55
Number of singletons
46
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009277772.1 NC_031001_p33 hypothetical protein phrog_2344 unknown function unknown function 1 27978 28466
YP_009277827.1 NC_031001_p88 hypothetical protein singleton unknown function unknown function 1 61809 62303
YP_009277797.1 NC_031001_p58 hypothetical protein phrog_9460 methyltransferase other 1 42735 43478
YP_009277809.1 NC_031001_p70 hypothetical protein singleton unknown function unknown function 1 50940 51599
YP_009277748.1 NC_031001_p9 hypothetical protein phrog_194 head scaffolding protein head and packaging 1 5939 6685
YP_009277770.1 NC_031001_p31 hypothetical protein phrog_9752 holin lysis 1 27125 27529
YP_009277757.1 NC_031001_p18 hypothetical protein phrog_5278 unknown function unknown function 1 10662 10847
YP_009277811.1 NC_031001_p72 hypothetical protein singleton unknown function unknown function 1 51942 52160
YP_009277773.1 NC_031001_p34 hypothetical protein singleton unknown function unknown function 1 28466 28834
YP_009277802.1 NC_031001_p63 hypothetical protein singleton unknown function unknown function 1 45753 45926
YP_009277752.1 NC_031001_p13 hypothetical protein phrog_5274 unknown function unknown function 1 8817 9137
YP_009277808.1 NC_031001_p69 hypothetical protein singleton unknown function unknown function 1 50410 50934
YP_009277776.1 NC_031001_p37 hypothetical protein phrog_1342 unknown function unknown function 1 30953 31420
YP_009277763.1 NC_031001_p24 minor tail protein phrog_1885 minor tail protein tail 1 20204 21337
YP_009277831.1 NC_031001_p92 hypothetical protein phrog_7407 unknown function unknown function 1 63182 64579
YP_009277796.1 NC_031001_p57 RecA-like recombinase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 41806 42735
YP_009277778.1 NC_031001_p39 hypothetical protein phrog_16415 unknown function unknown function 1 32275 32700
YP_009277822.1 NC_031001_p83 RHH DNA binding protein singleton unknown function unknown function 1 56739 56924
YP_009277801.1 NC_031001_p62 hypothetical protein singleton unknown function unknown function 1 45191 45772
YP_009277769.1 NC_031001_p30 lysin A phrog_2998 endolysin lysis 1 25971 27116
YP_009277835.1 NC_031001_p96 lysin B phrog_102 endolysin lysis 1 65473 66189
YP_009277781.1 NC_031001_p42 hypothetical protein phrog_2355 unknown function unknown function 1 33095 33541
YP_009277806.1 NC_031001_p67 DNA polymerase III alpha subunit phrog_11165 DNA polymerase DNA, RNA and nucleotide metabolism 1 47717 50152
YP_009277803.1 NC_031001_p64 hypothetical protein singleton unknown function unknown function 1 45936 46523
YP_009277793.1 NC_031001_p54 hypothetical protein singleton unknown function unknown function 1 39605 40144
YP_009277788.1 NC_031001_p49 hypothetical protein phrog_5307 unknown function unknown function 1 35794 36414
YP_009277767.1 NC_031001_p28 minor tail protein phrog_819 tail protein tail 1 24381 25379
YP_009277741.1 NC_031001_p2 portal protein phrog_64 portal protein head and packaging 1 1538 3241
YP_009277779.1 NC_031001_p40 hypothetical protein singleton unknown function unknown function 1 32702 32821
YP_009277826.1 NC_031001_p87 hypothetical protein singleton unknown function unknown function 1 61243 61812
YP_009277813.1 NC_031001_p74 hypothetical protein singleton unknown function unknown function 1 53386 53688
YP_009277759.1 NC_031001_p20 tail assembly chaperone phrog_4336 tail assembly chaperone tail 1 11749 12312
YP_009277810.1 NC_031001_p71 hypothetical protein singleton unknown function unknown function 1 51592 51945
YP_009277768.1 NC_031001_p29 minor tail protein phrog_7114 minor tail protein tail 1 25376 25954
YP_009277817.1 NC_031001_p78 hypothetical protein singleton unknown function unknown function 1 54404 55051
YP_009277745.1 NC_031001_p6 hypothetical protein singleton unknown function unknown function 1 4196 4468
YP_009277794.1 NC_031001_p55 DEAD-like helicase phrog_1218 exonuclease DNA, RNA and nucleotide metabolism 1 40488 41633
YP_009277815.1 NC_031001_p76 hypothetical protein singleton unknown function unknown function 1 53937 54251
YP_009277789.1 NC_031001_p50 hypothetical protein singleton unknown function unknown function 1 36414 36569
YP_009277747.1 NC_031001_p8 hypothetical protein singleton unknown function unknown function 1 5498 5872
YP_009277764.1 NC_031001_p25 minor tail protein phrog_2689 minor tail protein tail 1 21340 23304
YP_009277755.1 NC_031001_p16 head-to-tail connector protein phrog_4995 unknown function unknown function 1 9866 10276
YP_009277829.1 NC_031001_p90 hypothetical protein singleton unknown function unknown function 1 62551 62895
YP_009277753.1 NC_031001_p14 hypothetical protein phrog_4904 unknown function unknown function 1 9137 9526
YP_009277799.1 NC_031001_p60 oxidoreductase phrog_8720 unknown function unknown function 1 43720 44595
YP_009277740.1 NC_031001_p1 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1 1509
YP_009277820.1 NC_031001_p81 resolvase phrog_1981 unknown function unknown function 1 55698 56519
YP_009277782.1 NC_031001_p43 hypothetical protein phrog_421 unknown function unknown function 1 33538 34578
YP_009277766.1 NC_031001_p27 minor tail protein phrog_13286 tail protein tail 1 23624 24409
YP_009277836.1 NC_031001_p97 hypothetical protein singleton unknown function unknown function 1 66211 66447
YP_009277785.1 NC_031001_p46 hypothetical protein singleton unknown function unknown function 1 35026 35430
YP_009277765.1 NC_031001_p26 hypothetical protein phrog_10981 unknown function unknown function 1 23306 23614
YP_009277780.1 NC_031001_p41 hypothetical protein singleton unknown function unknown function 1 32886 33095
YP_009277744.1 NC_031001_p5 hypothetical protein singleton unknown function unknown function 1 4050 4196
YP_009277762.1 NC_031001_p23 minor tail protein phrog_33 distal tail protein Dit tail 1 19319 20188
YP_009277795.1 NC_031001_p56 hypothetical protein phrog_8491 unknown function unknown function 1 41633 41815
YP_009277751.1 NC_031001_p12 hypothetical protein singleton unknown function unknown function 1 8251 8748
YP_009277791.1 NC_031001_p52 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 38667 39068
YP_009277756.1 NC_031001_p17 hypothetical protein phrog_14208 unknown function unknown function 1 10309 10662
YP_009277749.1 NC_031001_p10 hypothetical protein phrog_5042 unknown function unknown function 1 6697 7074
YP_009277750.1 NC_031001_p11 major capsid protein phrog_3990 major head protein head and packaging 1 7088 8251
YP_009277816.1 NC_031001_p77 hypothetical protein singleton unknown function unknown function 1 54241 54402
YP_009277792.1 NC_031001_p53 hypothetical protein singleton unknown function unknown function 1 39061 39465
YP_009277818.1 NC_031001_p79 hypothetical protein singleton unknown function unknown function 1 55044 55349
YP_009277833.1 NC_031001_p94 hypothetical protein singleton unknown function unknown function 1 64860 65030
YP_009277814.1 NC_031001_p75 hypothetical protein phrog_19886 unknown function unknown function 1 53685 53855
YP_009277787.1 NC_031001_p48 hypothetical protein singleton unknown function unknown function 1 35594 35797
YP_009277743.1 NC_031001_p4 hypothetical protein singleton unknown function unknown function 1 3454 4041
YP_009277819.1 NC_031001_p80 hypothetical protein singleton unknown function unknown function 1 55346 55705
YP_009277771.1 NC_031001_p32 hypothetical protein phrog_2272 unknown function unknown function 1 27531 27977
YP_009277774.1 NC_031001_p35 hypothetical protein singleton unknown function unknown function 1 29730 30323
YP_009277798.1 NC_031001_p59 hypothetical protein singleton unknown function unknown function 1 43482 43595
YP_009277824.1 NC_031001_p85 hypothetical protein singleton unknown function unknown function 1 60024 60803
YP_009277790.1 NC_031001_p51 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 36616 38670
YP_009277761.1 NC_031001_p22 tape measure protein phrog_6435 tail length tape measure protein tail 1 12549 19319
YP_009277760.1 NC_031001_p21 tail assembly chaperone singleton unknown function unknown function 1 12350 12547
YP_009277786.1 NC_031001_p47 hypothetical protein singleton unknown function unknown function 1 35430 35597
YP_009277758.1 NC_031001_p19 major tail protein phrog_4971 major tail protein tail 1 10844 11707
YP_009277830.1 NC_031001_p91 hypothetical protein singleton unknown function unknown function 1 62892 63182
YP_009277812.1 NC_031001_p73 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 52169 53389
YP_009277807.1 NC_031001_p68 hypothetical protein singleton unknown function unknown function 1 50196 50336
YP_009277800.1 NC_031001_p61 methyltransferase phrog_6636 methyltransferase other 1 44592 45194
YP_009277825.1 NC_031001_p86 hypothetical protein singleton unknown function unknown function 1 60857 61234
YP_009277784.1 NC_031001_p45 hypothetical protein phrog_2660 unknown function unknown function 1 34763 35026
YP_009277828.1 NC_031001_p89 hypothetical protein singleton unknown function unknown function 1 62300 62554
YP_009277742.1 NC_031001_p3 hypothetical protein singleton unknown function unknown function 1 3257 3454
YP_009277805.1 NC_031001_p66 hypothetical protein singleton unknown function unknown function 1 47473 47730
YP_009277804.1 NC_031001_p65 DNA polymerase III alpha subunit phrog_7513 unknown function unknown function 1 46520 47476
YP_009277823.1 NC_031001_p84 DNA primase/polymerase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 56925 59786
YP_009277821.1 NC_031001_p82 hypothetical protein singleton unknown function unknown function 1 56516 56746
YP_009277783.1 NC_031001_p44 hypothetical protein phrog_23287 unknown function unknown function 1 34575 34766
YP_009277754.1 NC_031001_p15 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 9519 9869
YP_009277777.1 NC_031001_p38 hypothetical protein phrog_6032 unknown function unknown function 1 31422 32201
YP_009277746.1 NC_031001_p7 hypothetical protein singleton unknown function unknown function 1 4674 5429
YP_009277834.1 NC_031001_p95 hypothetical protein singleton unknown function unknown function 1 65027 65473
YP_009277775.1 NC_031001_p36 hypothetical protein phrog_20898 unknown function unknown function 1 30423 30863
YP_009277832.1 NC_031001_p93 hypothetical protein phrog_4307 unknown function unknown function 1 64576 64863