| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031005 |
Definition |
Propionibacterium phage QueenBey, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29338 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
43 |
%GC |
54.14 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009277990.1 | NC_031005_p12 | tail assembly chaperone | phrog_4075 | tail assembly chaperone | tail | 1 | 7817 | 8499 |
| YP_009277983.1 | NC_031005_p5 | scaffolding protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4077 | 4631 |
| YP_009278000.1 | NC_031005_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16819 | 17241 |
| YP_009278002.1 | NC_031005_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17631 | 17921 |
| YP_009278018.2 | NC_031005_p40 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25550 | 26083 |
| YP_009278011.1 | NC_031005_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21875 | 22738 |
| YP_009278009.1 | NC_031005_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21151 | 21552 |
| YP_009278020.1 | NC_031005_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26551 | 26859 |
| YP_009278013.1 | NC_031005_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23290 | 23700 |
| YP_009277991.1 | NC_031005_p13 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | 1 | 7817 | 8113 |
| YP_009278012.1 | NC_031005_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22779 | 23243 |
| YP_009278019.2 | NC_031005_p41 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26204 | 26515 |
| YP_009277985.1 | NC_031005_p7 | head-to-tail connector protein | phrog_1290 | head-tail adaptor | connector | 1 | 5611 | 6090 |
| YP_009278016.1 | NC_031005_p38 | hypothetical protein | phrog_4216 | unknown function | unknown function | -1 | 25023 | 25106 |
| YP_009277995.1 | NC_031005_p17 | minor tail protein | phrog_1910 | lectin | other | 1 | 13418 | 14236 |
| YP_009278021.1 | NC_031005_p43 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28974 | 29276 |
| YP_009277996.1 | NC_031005_p18 | minor tail protein | phrog_1958 | minor tail protein | tail | 1 | 14284 | 14541 |
| YP_009277979.2 | NC_031005_p1 | terminase small subunit | phrog_1897 | terminase small subunit | head and packaging | 1 | 65 | 373 |
| YP_009277984.1 | NC_031005_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4638 | 5585 |
| YP_009277992.1 | NC_031005_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8507 | 11272 |
| YP_009277982.1 | NC_031005_p4 | minor capsid protein | phrog_193 | head maturation protease | head and packaging | 1 | 3215 | 3970 |
| YP_009278008.1 | NC_031005_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20643 | 21314 |
| YP_009278005.1 | NC_031005_p27 | helix-turn-helix DNA binding domain protein | phrog_1923 | unknown function | unknown function | -1 | 19304 | 19492 |
| YP_009278006.1 | NC_031005_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19476 | 20036 |
| YP_009278001.1 | NC_031005_p23 | helix-turn-helix DNA binding domain protein | phrog_1729 | unknown function | unknown function | -1 | 17247 | 17627 |
| YP_009278010.1 | NC_031005_p32 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21512 | 21868 |
| YP_009277981.1 | NC_031005_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_009277989.1 | NC_031005_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7157 | 7789 |
| YP_009277994.2 | NC_031005_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 12243 | 13400 |
| YP_009277999.1 | NC_031005_p21 | holin | phrog_443 | holin | lysis | 1 | 16262 | 16660 |
| YP_009277986.1 | NC_031005_p8 | head-to-tail connector protein | phrog_501 | head closure Hc1 | connector | 1 | 6092 | 6439 |
| YP_009278017.1 | NC_031005_p39 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25078 | 25527 |
| YP_009277998.1 | NC_031005_p20 | lysin | phrog_670 | endolysin | lysis | 1 | 15398 | 16255 |
| YP_009278007.1 | NC_031005_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20033 | 20599 |
| YP_009277988.1 | NC_031005_p10 | minor tail protein | phrog_1892 | minor tail protein | tail | 1 | 6733 | 7104 |
| YP_009277987.1 | NC_031005_p9 | minor tail protein | phrog_387 | neck protein | connector | 1 | 6446 | 6736 |
| YP_009277980.1 | NC_031005_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| YP_009277997.1 | NC_031005_p19 | minor tail protein | phrog_1806 | collagen like minor tail | tail | 1 | 14541 | 15347 |
| YP_009278014.1 | NC_031005_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23697 | 24644 |
| YP_009277993.1 | NC_031005_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11288 | 12235 |
| YP_009278003.1 | NC_031005_p25 | helix-turn-helix DNA binding domain protein | phrog_1340 | unknown function | unknown function | -1 | 17934 | 18254 |
| YP_009278004.1 | NC_031005_p26 | exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18264 | 19307 |
| YP_009278015.1 | NC_031005_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24644 | 24997 |