Genomic map of Staphylococcus phage SLPW (NC_031008)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031008
Definition
Staphylococcus phage SLPW, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus SLPW.
DB of origin
REFSEQ
Length
17861
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
20
%GC
29.35
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009278563.1 NC_031008_p10 holin phrog_199 holin lysis -1 7458 7880
YP_009278554.1 NC_031008_p1 hypothetical protein phrog_6274 unknown function unknown function 1 467 769
YP_009278561.1 NC_031008_p8 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 3645 5930
YP_009278568.1 NC_031008_p15 major teichoic acid biosynthesis protein C phrog_287 minor tail protein tail -1 11971 13908
YP_009278566.1 NC_031008_p13 minor tail protein phrog_17481 minor tail protein tail -1 10592 11149
YP_009278557.1 NC_031008_p4 hypothetical protein phrog_7019 unknown function unknown function 1 1466 1645
YP_009278569.1 NC_031008_p16 lower collar protein phrog_3225 adaptor Ad4 connector -1 13921 14676
YP_009278555.1 NC_031008_p2 hypothetical protein phrog_6346 unknown function unknown function 1 787 1023
YP_009278573.1 NC_031008_p20 hypothetical protein phrog_7102 unknown function unknown function -1 17080 17445
YP_009278572.1 NC_031008_p19 hypothetical protein phrog_6289 unknown function unknown function -1 16885 17067
YP_009278558.1 NC_031008_p5 hypothetical protein phrog_8543 unknown function unknown function 1 1679 1849
YP_009278571.1 NC_031008_p18 capsid and scaffold protein phrog_2006 major head protein head and packaging -1 15667 16878
YP_009278565.1 NC_031008_p12 tail fibers protein phrog_21844 tail protein tail -1 9702 10157
YP_009278556.1 NC_031008_p3 single stranded DNA-binding protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 1047 1415
YP_009278560.1 NC_031008_p7 DNA packaging protein phrog_2150 terminase head and packaging 1 2382 3629
YP_009278562.1 NC_031008_p9 hypothetical protein phrog_5979 unknown function unknown function -1 6044 7483
YP_009278570.1 NC_031008_p17 collar protein phrog_2038 upper collar connector connector -1 14669 15652
YP_009278564.1 NC_031008_p11 tail fibers protein phrog_2248 tail protein tail -1 7882 9645
YP_009278559.1 NC_031008_p6 hypothetical protein phrog_6099 unknown function unknown function 1 1852 2334
YP_009278567.1 NC_031008_p14 N-acetylmuramoyl-L-alanine amidase phrog_635 endolysin lysis -1 11212 11964