Genomic map of Lactococcus phage D4412 (NC_031009)

functional categories (each PHROG annotation is associated to a category)             Notes   
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG

More about this genome

Lactococcus phage D4412, complete genome.
Molecule type
Genome structure
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Ceduovirus.
DB of origin
Host Name
Lactococcus lactis
Host domain
Is prophage?
Number of proteins
Number of singletons
Number of paralogs

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009278610.1 NC_031009_p37 hypothetical protein phrog_10648 unknown function unknown function 1 18274 20190
YP_009278595.1 NC_031009_p22 hypothetical protein phrog_11709 unknown function unknown function -1 7554 7694
YP_009278575.1 NC_031009_p2 hypothetical protein phrog_10769 unknown function unknown function -1 655 1029
YP_009278579.1 NC_031009_p6 hypothetical protein phrog_1295 unknown function unknown function -1 2221 2385
YP_009278602.1 NC_031009_p29 tail fibers protein phrog_2634 major tail protein tail 1 12735 13352
YP_009278593.1 NC_031009_p20 hypothetical protein phrog_1284 unknown function unknown function -1 6345 7244
YP_009278583.1 NC_031009_p10 hypothetical protein phrog_11155 unknown function unknown function -1 3553 3771
YP_009278611.1 NC_031009_p38 capsid and scaffold protein phrog_10067 virion structural protein head and packaging 1 20187 21164
YP_009278598.1 NC_031009_p25 N-acetylmuramoyl-L-alanine amidase phrog_7 endolysin lysis 1 9097 9750
YP_009278586.1 NC_031009_p13 hypothetical protein phrog_3530 unknown function unknown function -1 4187 4627
YP_009278613.1 NC_031009_p40 holin phrog_9407 holin lysis 1 22433 22723
YP_009278588.1 NC_031009_p15 hypothetical protein phrog_33239 unknown function unknown function -1 4974 5096
YP_009278587.1 NC_031009_p14 hypothetical protein phrog_1225 unknown function unknown function -1 4662 4973
YP_009278590.1 NC_031009_p17 hypothetical protein phrog_10596 unknown function unknown function -1 5321 5710
YP_009278607.1 NC_031009_p34 hypothetical protein phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16123 16410
YP_009278596.1 NC_031009_p23 hypothetical protein phrog_10074 unknown function unknown function 1 8378 8527
YP_009278597.1 NC_031009_p24 hypothetical protein phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 8538 9023
YP_009278591.1 NC_031009_p18 DNA polymerase phrog_10577 DNA polymerase DNA, RNA and nucleotide metabolism -1 5710 6090
YP_009278608.1 NC_031009_p35 terminase large subunit phrog_9 terminase large subunit head and packaging 1 16422 17978
YP_009278581.1 NC_031009_p8 essential recombination function protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 2808 3347
YP_009278578.1 NC_031009_p5 hypothetical protein phrog_1317 unknown function unknown function -1 1724 2224
YP_009278594.1 NC_031009_p21 hypothetical protein phrog_10138 unknown function unknown function -1 7246 7446
YP_009278589.1 NC_031009_p16 hypothetical protein phrog_9988 unknown function unknown function -1 5083 5265
YP_009278600.1 NC_031009_p27 capsid and scaffold protein phrog_3270 head maturation protease head and packaging 1 10551 11993
YP_009278604.1 NC_031009_p31 hypothetical protein phrog_12461 unknown function unknown function 1 13721 13891
YP_009278585.1 NC_031009_p12 transcriptional regulator phrog_10808 transcriptional regulator transcription regulation -1 3988 4173
YP_009278576.1 NC_031009_p3 hypothetical protein phrog_10148 unknown function unknown function -1 1103 1405
YP_009278574.1 NC_031009_p1 hypothetical protein phrog_21914 unknown function unknown function -1 454 651
YP_009278609.1 NC_031009_p36 hypothetical protein phrog_10033 unknown function unknown function 1 17978 18277
YP_009278580.1 NC_031009_p7 hypothetical protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 2398 2742
YP_009278603.1 NC_031009_p30 hypothetical protein phrog_10561 unknown function unknown function 1 13425 13679
YP_009278606.1 NC_031009_p33 tail length tape-measure protein phrog_9145 tail length tape measure protein tail 1 14264 16126
YP_009278592.1 NC_031009_p19 DNA polymerase phrog_21006 DNA polymerase DNA, RNA and nucleotide metabolism -1 6087 6275
YP_009278612.1 NC_031009_p39 capsid and scaffold protein phrog_10326 virion structural protein head and packaging 1 21157 22413
YP_009278584.1 NC_031009_p11 hypothetical protein phrog_1632 unknown function unknown function -1 3771 4016
YP_009278601.1 NC_031009_p28 hypothetical protein phrog_10227 unknown function unknown function 1 12013 12717
YP_009278577.1 NC_031009_p4 hypothetical protein phrog_10525 unknown function unknown function -1 1398 1721
YP_009278582.1 NC_031009_p9 hypothetical protein phrog_10559 unknown function unknown function -1 3347 3499
YP_009278599.1 NC_031009_p26 capsid and scaffold protein phrog_10159 virion structural protein head and packaging 1 9761 10600
YP_009278605.1 NC_031009_p32 hypothetical protein phrog_10523 unknown function unknown function 1 13867 14271