| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031015 |
Definition |
Bacillus phage Claudi, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
DB of origin |
REFSEQ |
Length |
26504 |
Host Name |
Bacillus thuringiensis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
30.25 |
Number of singletons |
6 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009279591.1 | NC_031015_p23 | hypothetical protein | singleton | unknown function | unknown function | -1 | 11087 | 11239 |
| YP_009279574.1 | NC_031015_p6 | hypothetical protein | phrog_11122 | unknown function | unknown function | -1 | 2278 | 2895 |
| YP_009279579.1 | NC_031015_p11 | hypothetical protein | phrog_27751 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 4320 | 4442 |
| YP_009279608.1 | NC_031015_p40 | hypothetical protein | phrog_30087 | unknown function | unknown function | 1 | 24616 | 24684 |
| YP_009279577.1 | NC_031015_p9 | hypothetical protein | phrog_11443 | unknown function | unknown function | -1 | 3853 | 3993 |
| YP_009279595.1 | NC_031015_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 11780 | 11932 |
| YP_009279587.1 | NC_031015_p19 | ssDNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 8808 | 9179 |
| YP_009279593.1 | NC_031015_p25 | hypothetical protein | phrog_31137 | unknown function | unknown function | -1 | 11459 | 11593 |
| YP_009279609.1 | NC_031015_p41 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24681 | 24860 |
| YP_009279603.1 | NC_031015_p35 | pre-neck appendage protein | phrog_7458 | tail spike protein | tail | 1 | 19063 | 21216 |
| YP_009279614.1 | NC_031015_p46 | early protein | phrog_6682 | GP16.7-like replication protein | DNA, RNA and nucleotide metabolism | -1 | 25771 | 26205 |
| YP_009279605.1 | NC_031015_p37 | hypothetical protein | phrog_4898 | holin | lysis | 1 | 22489 | 22638 |
| YP_009279582.1 | NC_031015_p14 | terminal protein | phrog_6358 | DNA terminal protein | DNA, RNA and nucleotide metabolism | -1 | 6671 | 7588 |
| YP_009279611.1 | NC_031015_p43 | hypothetical protein | phrog_8526 | unknown function | unknown function | -1 | 25044 | 25337 |
| YP_009279600.1 | NC_031015_p32 | major tail protein | phrog_2248 | tail protein | tail | 1 | 15266 | 17035 |
| YP_009279602.1 | NC_031015_p34 | lower collar protein | phrog_3225 | adaptor Ad4 | connector | 1 | 17981 | 19048 |
| YP_009279584.1 | NC_031015_p16 | hypothetical protein | phrog_803 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | -1 | 7962 | 8318 |
| YP_009279592.1 | NC_031015_p24 | hypothetical protein | singleton | unknown function | unknown function | -1 | 11340 | 11495 |
| YP_009279573.1 | NC_031015_p5 | hypothetical protein | phrog_12799 | unknown function | unknown function | -1 | 1796 | 2266 |
| YP_009279596.1 | NC_031015_p28 | hypothetical protein | phrog_21220 | unknown function | unknown function | -1 | 12013 | 12150 |
| YP_009279575.1 | NC_031015_p7 | hypothetical protein | phrog_8992 | unknown function | unknown function | -1 | 3014 | 3610 |
| YP_009279599.1 | NC_031015_p31 | major head protein | phrog_2006 | major head protein | head and packaging | 1 | 13413 | 14372 |
| YP_009279601.1 | NC_031015_p33 | upper collar connector | phrog_2038 | upper collar connector | connector | 1 | 17038 | 17994 |
| YP_009279569.1 | NC_031015_p1 | hypothetical protein | phrog_8978 | unknown function | unknown function | -1 | 415 | 675 |
| YP_009279578.1 | NC_031015_p10 | hypothetical protein | phrog_11729 | unknown function | unknown function | -1 | 3997 | 4323 |
| YP_009279590.1 | NC_031015_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 10760 | 10918 |
| YP_009279585.1 | NC_031015_p17 | hypothetical protein | phrog_23618 | unknown function | unknown function | -1 | 8331 | 8480 |
| YP_009279597.1 | NC_031015_p29 | hypothetical protein | phrog_6370 | dsDNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 12238 | 12537 |
| YP_009279588.1 | NC_031015_p20 | hypothetical protein | phrog_34754 | unknown function | unknown function | -1 | 10111 | 10497 |
| YP_009279612.1 | NC_031015_p44 | hypothetical protein | phrog_14668 | unknown function | unknown function | -1 | 25337 | 25480 |
| YP_009279613.1 | NC_031015_p45 | hypothetical protein | phrog_11289 | unknown function | unknown function | -1 | 25483 | 25770 |
| YP_009279581.1 | NC_031015_p13 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 4583 | 6655 |
| YP_009279610.1 | NC_031015_p42 | hypothetical protein | phrog_12011 | unknown function | unknown function | -1 | 24857 | 25042 |
| YP_009279594.1 | NC_031015_p26 | hypothetical protein | singleton | unknown function | unknown function | -1 | 11605 | 11778 |
| YP_009279576.1 | NC_031015_p8 | hypothetical protein | phrog_26704 | unknown function | unknown function | -1 | 3707 | 3856 |
| YP_009279580.1 | NC_031015_p12 | hypothetical protein | phrog_16566 | unknown function | unknown function | -1 | 4439 | 4567 |
| YP_009279586.1 | NC_031015_p18 | hypothetical protein | phrog_30758 | unknown function | unknown function | -1 | 8493 | 8654 |
| YP_009279604.1 | NC_031015_p36 | morphogenesis protein | phrog_9066 | endolysin | lysis | 1 | 21216 | 22454 |
| YP_009279598.1 | NC_031015_p30 | scaffold protein | phrog_11209 | head scaffolding protein | head and packaging | 1 | 13052 | 13354 |
| YP_009279606.1 | NC_031015_p38 | endolysin | phrog_291 | endolysin | lysis | 1 | 22640 | 23437 |
| YP_009279570.1 | NC_031015_p2 | hypothetical protein | phrog_4472 | nucleotide kinase | other | -1 | 672 | 1022 |
| YP_009279607.1 | NC_031015_p39 | DNA encapsidation ATPase | phrog_2150 | terminase | head and packaging | 1 | 23516 | 24616 |
| YP_009279572.1 | NC_031015_p4 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 1516 | 1794 |
| YP_009279571.1 | NC_031015_p3 | dUTPase | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 1022 | 1519 |
| YP_009279583.1 | NC_031015_p15 | hypothetical protein | phrog_374 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 7628 | 7876 |
| YP_009279589.1 | NC_031015_p21 | hypothetical protein | phrog_18473 | unknown function | unknown function | -1 | 10511 | 10741 |