Genomic map of Salmonella phage MA12 (NC_031021)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031021
Definition
Salmonella phage MA12, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus; unclassified Jerseyvirus.
DB of origin
REFSEQ
Length
41224
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
49.87
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009280160.1 NC_031021_p32 hypothetical protein phrog_4879 unknown function unknown function 1 20774 20965
YP_009280175.1 NC_031021_p47 DNA-binding protein Roi phrog_63 anti-repressor Ant transcription regulation 1 34127 34798
YP_009280159.1 NC_031021_p31 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 20455 20742
YP_009280143.1 NC_031021_p15 hypothetical protein phrog_2180 unknown function unknown function -1 7856 8041
YP_009280161.1 NC_031021_p33 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 21046 22386
YP_009280164.1 NC_031021_p36 tail fibers protein phrog_1819 tail spike protein tail -1 23126 25180
YP_009280184.1 NC_031021_p56 capsid and scaffold protein phrog_4366 head fiber protein head and packaging -1 38874 39158
YP_009280170.1 NC_031021_p42 hypothetical protein phrog_4557 unknown function unknown function -1 31462 31821
YP_009280136.1 NC_031021_p8 hypothetical protein phrog_10956 unknown function unknown function -1 6471 6653
YP_009280138.1 NC_031021_p10 hypothetical protein phrog_268 unknown function unknown function -1 6952 7176
YP_009280135.1 NC_031021_p7 hypothetical protein phrog_18319 unknown function unknown function -1 6279 6410
YP_009280139.1 NC_031021_p11 hypothetical protein phrog_10200 unknown function unknown function -1 7173 7322
YP_009280173.1 NC_031021_p45 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 32656 33786
YP_009280182.1 NC_031021_p54 hypothetical protein phrog_4451 unknown function unknown function -1 38287 38475
YP_009280185.1 NC_031021_p57 capsid protein phrog_247 major head protein head and packaging -1 39219 40268
YP_009280176.1 NC_031021_p48 hypothetical protein phrog_290 minor tail protein tail -1 34827 35996
YP_009280154.1 NC_031021_p26 13.88 kDa late protein phrog_3127 unknown function unknown function 1 14334 14861
YP_009280148.1 NC_031021_p20 hypothetical protein phrog_3766 unknown function unknown function -1 9714 9917
YP_009280134.1 NC_031021_p6 hypothetical protein phrog_3064 terminase head and packaging -1 5744 6250
YP_009280147.1 NC_031021_p19 hypothetical protein phrog_4947 unknown function unknown function -1 9346 9711
YP_009280131.1 NC_031021_p3 hypothetical protein phrog_6095 amidase lysis 1 2317 2967
YP_009280155.1 NC_031021_p27 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 14904 16331
YP_009280144.1 NC_031021_p16 lysin phrog_7 endolysin lysis -1 8227 8715
YP_009280171.1 NC_031021_p43 hypothetical protein phrog_313 Tail assembly chaperone tail -1 31827 32243
YP_009280152.1 NC_031021_p24 DNA primase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism 1 11781 13967
YP_009280141.1 NC_031021_p13 hypothetical protein phrog_4684 unknown function unknown function -1 7549 7704
YP_009280166.1 NC_031021_p38 hypothetical protein phrog_329 minor tail protein tail -1 27760 28125
YP_009280180.1 NC_031021_p52 hypothetical protein phrog_3614 unknown function unknown function -1 37166 37771
YP_009280149.1 NC_031021_p21 hypothetical protein phrog_6094 unknown function unknown function -1 9914 10300
YP_009280181.1 NC_031021_p53 hypothetical protein phrog_477 head-tail adaptor Ad1 connector -1 37774 38283
YP_009280157.1 NC_031021_p29 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 16586 17212
YP_009280140.1 NC_031021_p12 hypothetical protein phrog_1402 unknown function unknown function -1 7319 7552
YP_009280130.1 NC_031021_p2 hypothetical protein phrog_241 head morphogenesis head and packaging -1 1108 2151
YP_009280163.1 NC_031021_p35 hypothetical protein phrog_5915 unknown function unknown function 1 22874 23041
YP_009280153.1 NC_031021_p25 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 13982 14200
YP_009280162.1 NC_031021_p34 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 22383 22874
YP_009280169.1 NC_031021_p41 hypothetical protein phrog_1538 tail length tape measure protein tail -1 29136 31469
YP_009280186.1 NC_031021_p58 hypothetical protein phrog_206 head scaffolding protein head and packaging -1 40272 40973
YP_009280132.1 NC_031021_p4 62kDa structural protein phrog_145 portal protein head and packaging -1 2998 4470
YP_009280150.1 NC_031021_p22 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 11324 11494
YP_009280172.1 NC_031021_p44 hypothetical protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 32414 32593
YP_009280167.1 NC_031021_p39 hypothetical protein phrog_396 minor tail protein tail -1 28122 28637
YP_009280174.1 NC_031021_p46 hypothetical protein phrog_2452 unknown function unknown function 1 33783 34013
YP_009280151.1 NC_031021_p23 hypothetical protein phrog_5169 unknown function unknown function 1 11491 11724
YP_009280178.1 NC_031021_p50 hypothetical protein phrog_169 tail completion or Neck1 protein connector -1 36415 36810
YP_009280142.1 NC_031021_p14 hypothetical protein phrog_3002 unknown function unknown function -1 7701 7859
YP_009280168.1 NC_031021_p40 hypothetical protein phrog_384 virion structural protein head and packaging -1 28634 29077
YP_009280156.1 NC_031021_p28 hypothetical protein phrog_13603 unknown function unknown function 1 16328 16504
YP_009280158.1 NC_031021_p30 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 17270 20368
YP_009280129.1 NC_031021_p1 neck whiskers protein phrog_3945 Hoc-like head decoration head and packaging -1 647 1105
YP_009280177.1 NC_031021_p49 hypothetical protein phrog_179 tail terminator connector -1 35996 36415
YP_009280145.1 NC_031021_p17 hypothetical protein phrog_2508 holin lysis -1 8696 8983
YP_009280146.1 NC_031021_p18 hypothetical protein phrog_2359 holin lysis -1 8985 9266
YP_009280165.1 NC_031021_p37 tail fiber protein phrog_469 tail protein tail -1 25193 27769
YP_009280183.1 NC_031021_p55 neck whiskers protein phrog_4069 Hoc-like head decoration head and packaging -1 38512 38862
YP_009280137.1 NC_031021_p9 hypothetical protein phrog_2531 unknown function unknown function -1 6650 6952
YP_009280179.1 NC_031021_p51 hypothetical protein phrog_161 head closure Hc1 connector -1 36807 37166
YP_009280133.1 NC_031021_p5 terminase phrog_2 terminase large subunit head and packaging -1 4483 5754
YP_009280187.1 NC_031021_p59 hypothetical protein phrog_5672 Rz-like spanin lysis -1 41058 41201