Genomic map of Streptococcus virus 9874 (NC_031023)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031023
Definition
Streptococcus virus 9874, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
32649
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
36.61
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009280337.1 NC_031023_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 6886 7212
YP_009280342.1 NC_031023_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 8941 11568
YP_009280327.1 NC_031023_p1 hypothetical protein phrog_309 terminase small subunit head and packaging 1 51 533
YP_009280339.1 NC_031023_p13 major tail protein phrog_238 major tail protein tail 1 7609 8106
YP_009280352.1 NC_031023_p26 hypothetical protein phrog_8487 unknown function unknown function 1 20431 20766
YP_009280331.1 NC_031023_p5 minor capsid protein phrog_115 minor head protein head and packaging 1 3343 4383
YP_009280364.1 NC_031023_p38 endodeoxyribonuclease RusA phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 27320 27724
YP_009280366.1 NC_031023_p40 hypothetical protein phrog_7312 unknown function unknown function 1 28025 28600
YP_009280343.1 NC_031023_p17 distal tail protein phrog_33 distal tail protein Dit tail 1 11578 12339
YP_009280351.1 NC_031023_p25 lysin phrog_4238 endolysin lysis 1 19887 20114
YP_009280345.1 NC_031023_p19 antireceptor phrog_15175 virion structural protein head and packaging 1 15083 17026
YP_009280335.1 NC_031023_p9 head-tail connector protein phrog_132 head-tail adaptor connector 1 6249 6581
YP_009280367.1 NC_031023_p41 hypothetical protein singleton unknown function unknown function 1 28729 28950
YP_009280370.1 NC_031023_p44 hypothetical protein phrog_121 unknown function unknown function 1 29562 30128
YP_009280360.1 NC_031023_p34 hypothetical protein phrog_3159 unknown function unknown function 1 24875 25072
YP_009280355.1 NC_031023_p29 Cro-like protein phrog_3 transcriptional repressor transcription regulation 1 21848 22051
YP_009280344.1 NC_031023_p18 tail-associated lysin phrog_1067 minor head protein head and packaging 1 12339 15071
YP_009280358.1 NC_031023_p32 DNA replication protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 23218 24084
YP_009280362.1 NC_031023_p36 nuclease phrog_1227 exonuclease DNA, RNA and nucleotide metabolism 1 26022 26858
YP_009280347.1 NC_031023_p21 holin phrog_689 holin lysis 1 17761 17985
YP_009280353.1 NC_031023_p27 hypothetical protein phrog_13146 unknown function unknown function 1 20792 21082
YP_009280354.1 NC_031023_p28 hypothetical protein phrog_4964 unknown function unknown function 1 21111 21662
YP_009280334.1 NC_031023_p8 hypothetical protein phrog_215 structural protein with Ig domain head and packaging 1 6044 6235
YP_009280368.1 NC_031023_p42 hypothetical protein phrog_1489 unknown function unknown function 1 28954 29109
YP_009280374.1 NC_031023_p48 ArpU late transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 32073 32522
YP_009280350.1 NC_031023_p24 endonuclease phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 19064 19825
YP_009280348.1 NC_031023_p22 holin phrog_297 holin lysis 1 18011 18253
YP_009280365.1 NC_031023_p39 hypothetical protein phrog_1982 unknown function unknown function 1 27790 27960
YP_009280340.1 NC_031023_p14 tail chaperone protein phrog_183 tail chaperone protein tail 1 8222 8572
YP_009280349.1 NC_031023_p23 lysin phrog_998 endolysin lysis 1 18255 18857
YP_009280371.1 NC_031023_p45 DNA-binding protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism 1 30129 30641
YP_009280372.1 NC_031023_p46 hypothetical protein phrog_884 unknown function unknown function 1 30610 30918
YP_009280357.1 NC_031023_p31 hypothetical protein phrog_1022 unknown function unknown function 1 22765 22920
YP_009280361.1 NC_031023_p35 RecT recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 25197 25946
YP_009280333.1 NC_031023_p7 major capsid protein phrog_840 major head protein head and packaging 1 5115 5978
YP_009280330.1 NC_031023_p4 portal protein phrog_64 portal protein head and packaging 1 1999 3339
YP_009280328.1 NC_031023_p2 TerS phrog_8148 terminase small subunit head and packaging 1 595 789
YP_009280336.1 NC_031023_p10 hypothetical protein phrog_348 minor head protein head and packaging 1 6578 6889
YP_009280341.1 NC_031023_p15 hypothetical protein phrog_441 tail assembly chaperone tail 1 8656 8925
YP_009280338.1 NC_031023_p12 tail terminator protein phrog_176 tail terminator connector 1 7209 7598
YP_009280369.1 NC_031023_p43 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 29166 29549
YP_009280363.1 NC_031023_p37 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 26873 27319
YP_009280356.1 NC_031023_p30 hypothetical protein singleton unknown function unknown function 1 22187 22414
YP_009280346.1 NC_031023_p20 serine acetyltransferase phrog_2154 unknown function unknown function 1 17102 17581
YP_009280332.1 NC_031023_p6 scaffolding protein phrog_2932 head scaffolding protein head and packaging 1 4500 5099
YP_009280329.1 NC_031023_p3 TerL phrog_38 terminase large subunit head and packaging 1 835 1998
YP_009280359.1 NC_031023_p33 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 24096 24878
YP_009280373.1 NC_031023_p47 hypothetical protein phrog_1814 unknown function unknown function 1 30915 31622