Genomic map of Gordonia phage Ghobes (NC_031028)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031028
Definition
Gordonia phage Ghobes, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Ghobesvirus; Gordonia virus Ghobes.
DB of origin
REFSEQ
Length
45285
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
65.24
Number of singletons
18
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009281117.1 NC_031028_p14 tape measure protein phrog_4197 tail length tape measure protein tail 1 9172 13494
YP_009281153.1 NC_031028_p50 adenylosuccinate synthetase phrog_1211 2-aminooxy adenylosuccinate synthetase DNA, RNA and nucleotide metabolism 1 40671 41762
YP_009281127.1 NC_031028_p24 hypothetical protein phrog_9406 unknown function unknown function 1 19966 20331
YP_009281145.1 NC_031028_p42 hypothetical protein singleton unknown function unknown function 1 37458 37697
YP_009281122.1 NC_031028_p19 hypothetical protein phrog_636 unknown function unknown function -1 16780 17373
YP_009281151.1 NC_031028_p48 hypothetical protein singleton unknown function unknown function 1 39400 39894
YP_009281156.1 NC_031028_p53 deoxyuridine triphosphatase singleton unknown function unknown function 1 42692 43177
YP_009281146.1 NC_031028_p43 hypothetical protein singleton unknown function unknown function 1 37694 37840
YP_009281158.1 NC_031028_p55 deoxyuridine triphosphatase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 43399 43905
YP_009281109.1 NC_031028_p6 head-to-tail connector protein phrog_442 head-tail adaptor connector 1 5444 6055
YP_009281113.1 NC_031028_p10 hypothetical protein phrog_123 tail terminator connector 1 7000 7404
YP_009281137.1 NC_031028_p34 hypothetical protein singleton unknown function unknown function -1 30549 30692
YP_009281143.1 NC_031028_p40 hypothetical protein singleton unknown function unknown function 1 36231 36521
YP_009281149.1 NC_031028_p46 hypothetical protein singleton unknown function unknown function 1 38210 38428
YP_009281141.1 NC_031028_p38 hypothetical protein singleton unknown function unknown function 1 34052 34309
YP_009281132.1 NC_031028_p29 DNA primase/polymerase phrog_5177 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 24938 27496
YP_009281138.1 NC_031028_p35 DEAD-family helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 30689 32092
YP_009281160.1 NC_031028_p57 hypothetical protein singleton unknown function unknown function 1 44108 44380
YP_009281116.1 NC_031028_p13 tail assembly chaperone phrog_5010 tail assembly chaperone tail 1 8385 8807
YP_009281155.1 NC_031028_p52 hypothetical protein singleton unknown function unknown function 1 42330 42695
YP_009281106.1 NC_031028_p3 capsid maturation protease phrog_80 head maturation protease head and packaging 1 3135 3887
YP_009281125.1 NC_031028_p22 membrane protein phrog_1298 minor tail protein tail 1 18925 19572
YP_009281119.1 NC_031028_p16 minor tail protein phrog_110 minor tail protein tail 1 14348 15952
YP_009281129.1 NC_031028_p26 minor tail protein phrog_7719 minor tail protein tail 1 21406 22404
YP_009281133.1 NC_031028_p30 hypothetical protein phrog_2300 unknown function unknown function -1 27595 28065
YP_009281139.1 NC_031028_p36 adenylosuccinate lyase phrog_1703 unknown function unknown function -1 32089 33222
YP_009281134.1 NC_031028_p31 RecA-like exonuclease phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 28120 29118
YP_009281162.1 NC_031028_p59 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 45003 45227
YP_009281130.1 NC_031028_p27 minor tail protein phrog_8780 minor tail protein tail 1 22405 24501
YP_009281157.1 NC_031028_p54 hypothetical protein singleton unknown function unknown function 1 43158 43343
YP_009281154.1 NC_031028_p51 hypothetical protein singleton unknown function unknown function 1 41770 42333
YP_009281148.1 NC_031028_p45 hypothetical protein singleton unknown function unknown function 1 38010 38159
YP_009281115.1 NC_031028_p12 tail assembly chaperone phrog_8183 tail assembly chaperone tail 1 8385 9160
YP_009281159.1 NC_031028_p56 hypothetical protein singleton unknown function unknown function 1 43902 44111
YP_009281150.1 NC_031028_p47 hypothetical protein singleton unknown function unknown function 1 38469 39257
YP_009281128.1 NC_031028_p25 minor tail protein phrog_4120 minor tail protein tail 1 20324 21406
YP_009281131.1 NC_031028_p28 hypothetical protein singleton unknown function unknown function 1 24501 24941
YP_009281118.1 NC_031028_p15 minor tail protein phrog_106 minor tail protein tail 1 13491 14351
YP_009281112.1 NC_031028_p9 head-to-tail connector protein phrog_5837 head closure Hc1 connector 1 6705 7010
YP_009281144.1 NC_031028_p41 lysin B phrog_102 endolysin lysis 1 36518 37297
YP_009281111.1 NC_031028_p8 hypothetical protein phrog_9658 head-tail connector protein connector 1 6422 6715
YP_009281104.1 NC_031028_p1 terminase phrog_9 terminase large subunit head and packaging 1 60 1760
YP_009281135.1 NC_031028_p32 RecB-like nuclease phrog_1218 exonuclease DNA, RNA and nucleotide metabolism -1 29172 30098
YP_009281121.1 NC_031028_p18 hypothetical protein phrog_5392 unknown function unknown function -1 16407 16697
YP_009281108.1 NC_031028_p5 hypothetical protein phrog_4850 unknown function unknown function 1 5267 5443
YP_009281123.1 NC_031028_p20 lysin A phrog_2998 endolysin lysis 1 17505 18545
YP_009281147.1 NC_031028_p44 hypothetical protein phrog_15221 unknown function unknown function 1 37837 38010
YP_009281107.1 NC_031028_p4 major capsid protein phrog_10 major head protein head and packaging 1 3898 5187
YP_009281105.1 NC_031028_p2 portal protein phrog_12 portal protein head and packaging 1 1804 3138
YP_009281120.1 NC_031028_p17 hypothetical protein singleton unknown function unknown function -1 16011 16334
YP_009281114.1 NC_031028_p11 major tail subunit phrog_476 major tail protein tail 1 7439 8287
YP_009281142.1 NC_031028_p39 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 34306 36231
YP_009281110.1 NC_031028_p7 head-to-tail connector protein phrog_501 head closure Hc1 connector 1 6056 6415
YP_009281136.1 NC_031028_p33 hypothetical protein phrog_5202 unknown function unknown function -1 30085 30552
YP_009281161.1 NC_031028_p58 hypothetical protein phrog_799 DNA methyltransferase other 1 44334 44921
YP_009281124.1 NC_031028_p21 hypothetical protein phrog_9752 holin lysis 1 18551 18925
YP_009281152.1 NC_031028_p49 hypothetical protein phrog_421 unknown function unknown function 1 39896 40612
YP_009281140.1 NC_031028_p37 hypothetical protein singleton unknown function unknown function 1 33756 34022
YP_009281126.1 NC_031028_p23 membrane protein phrog_726 unknown function unknown function 1 19556 19969