Genomic map of Gordonia phage Remus (NC_031031)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031031
Definition
Gordonia phage Remus, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Soupsvirus; unclassified Soupsvirus.
DB of origin
REFSEQ
Length
52738
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
98
%GC
61.96
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009281690.1 NC_031031_p76 hypothetical protein phrog_9751 unknown function unknown function -1 43147 43320
YP_009281672.1 NC_031031_p58 phosphoesterase phrog_221 metallo-phosphoesterase other -1 35812 36576
YP_009281651.1 NC_031031_p37 hypothetical protein phrog_25843 unknown function unknown function -1 26135 26311
YP_009281668.1 NC_031031_p54 hypothetical protein phrog_2046 unknown function unknown function -1 34599 34790
YP_009281679.1 NC_031031_p65 hypothetical protein phrog_13497 unknown function unknown function -1 38521 38685
YP_009281619.1 NC_031031_p5 tail protein phrog_226 minor tail protein tail 1 2610 3065
YP_009281652.1 NC_031031_p38 hypothetical protein phrog_2142 unknown function unknown function -1 26308 26628
YP_009281642.1 NC_031031_p28 minor tail protein phrog_352 minor tail protein tail 1 20929 21372
YP_009281620.1 NC_031031_p6 tail protein phrog_1126 unknown function unknown function 1 3082 3417
YP_009281629.1 NC_031031_p15 major capsid protein phrog_10 major head protein head and packaging 1 11256 12206
YP_009281634.1 NC_031031_p20 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 13377 13745
YP_009281623.1 NC_031031_p9 lysin A phrog_2998 endolysin lysis 1 5360 6394
YP_009281626.1 NC_031031_p12 portal protein phrog_104 portal protein head and packaging 1 8341 9801
YP_009281704.1 NC_031031_p90 hypothetical protein phrog_14026 unknown function unknown function -1 48369 48536
YP_009281696.1 NC_031031_p82 hypothetical protein phrog_13943 unknown function unknown function -1 46008 46256
YP_009281691.1 NC_031031_p77 hypothetical protein phrog_10900 unknown function unknown function -1 43331 43525
YP_009281695.1 NC_031031_p81 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45089 45610
YP_009281654.1 NC_031031_p40 hypothetical protein phrog_14604 unknown function unknown function -1 27014 27148
YP_009281618.1 NC_031031_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2278 2574
YP_009281700.1 NC_031031_p86 hypothetical protein phrog_12580 unknown function unknown function -1 47527 47808
YP_009281706.1 NC_031031_p92 hypothetical protein phrog_9204 unknown function unknown function -1 48833 48961
YP_009281685.1 NC_031031_p71 hypothetical protein phrog_1374 unknown function unknown function -1 40419 40598
YP_009281712.1 NC_031031_p98 hypothetical protein phrog_13265 unknown function unknown function -1 51021 51305
YP_009281649.1 NC_031031_p35 hypothetical protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 25568 25807
YP_009281656.1 NC_031031_p42 hypothetical protein phrog_3771 unknown function unknown function -1 27374 27622
YP_009281677.1 NC_031031_p63 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37652 38284
YP_009281680.1 NC_031031_p66 lysin B phrog_6187 unknown function unknown function -1 38685 39320
YP_009281667.1 NC_031031_p53 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 32539 34602
YP_009281657.1 NC_031031_p43 hypothetical protein phrog_13791 unknown function unknown function -1 27622 27855
YP_009281617.1 NC_031031_p3 hypothetical protein phrog_4491 unknown function unknown function 1 1982 2281
YP_009281698.1 NC_031031_p84 hypothetical protein phrog_865 HNH endonuclease DNA, RNA and nucleotide metabolism -1 46509 46685
YP_009281631.1 NC_031031_p17 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 12451 12828
YP_009281636.1 NC_031031_p22 major tail protein phrog_117 major tail protein tail 1 14193 14795
YP_009281663.1 NC_031031_p49 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 30787 31485
YP_009281660.1 NC_031031_p46 HTH DNA binding domain protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 30016 30309
YP_009281701.1 NC_031031_p87 hypothetical protein phrog_9830 unknown function unknown function -1 47811 47996
YP_009281687.1 NC_031031_p73 hypothetical protein phrog_13179 unknown function unknown function -1 41398 41877
YP_009281683.1 NC_031031_p69 hypothetical protein phrog_14261 membrane protein moron, auxiliary metabolic gene and host takeover -1 39869 39967
YP_009281628.1 NC_031031_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10711 11223
YP_009281675.1 NC_031031_p61 NrdH-like glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 37177 37446
YP_009281697.1 NC_031031_p83 hypothetical protein phrog_14317 unknown function unknown function -1 46240 46512
YP_009281646.1 NC_031031_p32 hypothetical protein phrog_4480 unknown function unknown function 1 23852 24160
YP_009281703.1 NC_031031_p89 hypothetical protein phrog_15584 unknown function unknown function -1 48178 48366
YP_009281648.1 NC_031031_p34 dsDNA partitioning protein phrog_2639 Arc-like repressor transcription regulation 1 25232 25516
YP_009281638.1 NC_031031_p24 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 14909 15292
YP_009281707.1 NC_031031_p93 hypothetical protein phrog_13953 unknown function unknown function -1 48958 49371
YP_009281665.1 NC_031031_p51 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 31914 32444
YP_009281621.1 NC_031031_p7 hypothetical protein phrog_1197 tail protein tail 1 3414 4406
YP_009281659.1 NC_031031_p45 hypothetical protein phrog_762 unknown function unknown function -1 29660 30019
YP_009281682.1 NC_031031_p68 hypothetical protein phrog_13833 membrane protein moron, auxiliary metabolic gene and host takeover -1 39759 39872
YP_009281653.1 NC_031031_p39 hypothetical protein phrog_383 unknown function unknown function -1 26625 27014
YP_009281710.1 NC_031031_p96 hypothetical protein phrog_14166 unknown function unknown function -1 50602 50832
YP_009281650.1 NC_031031_p36 hypothetical protein phrog_11556 unknown function unknown function 1 25792 25986
YP_009281666.1 NC_031031_p52 hypothetical protein phrog_13800 membrane protein moron, auxiliary metabolic gene and host takeover -1 32441 32554
YP_009281644.1 NC_031031_p30 minor tail protein phrog_2689 minor tail protein tail 1 21707 23419
YP_009281699.1 NC_031031_p85 hypothetical protein phrog_421 unknown function unknown function -1 46695 47411
YP_009281658.1 NC_031031_p44 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 27869 29659
YP_009281643.1 NC_031031_p29 minor tail protein phrog_404 minor tail protein tail 1 21369 21710
YP_009281693.1 NC_031031_p79 RecB-like exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43827 44678
YP_009281664.1 NC_031031_p50 nucleotide pyrophosphohydrolase phrog_229 MazG-like pyrophosphatase other -1 31482 31826
YP_009281662.1 NC_031031_p48 hypothetical protein phrog_1454 unknown function unknown function -1 30533 30778
YP_009281624.1 NC_031031_p10 holin phrog_13682 holin lysis 1 6404 6631
YP_009281632.1 NC_031031_p18 hypothetical protein phrog_830 head-tail connector protein connector 1 12825 13022
YP_009281647.1 NC_031031_p33 dsDNA partitioning protein phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 24643 25209
YP_009281627.1 NC_031031_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9798 10658
YP_009281639.1 NC_031031_p25 tape measure protein phrog_305 tail length tape measure protein tail 1 15884 18073
YP_009281645.1 NC_031031_p31 DNA bridging protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 1 23409 23855
YP_009281616.1 NC_031031_p2 ADP-ribosyltransferase phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1098 1985
YP_009281640.1 NC_031031_p26 minor tail protein phrog_106 minor tail protein tail 1 18083 19060
YP_009281705.1 NC_031031_p91 hypothetical protein phrog_1946 unknown function unknown function -1 48591 48833
YP_009281671.1 NC_031031_p57 HTH DNA binding domain protein phrog_354 sigma-K factor transcription regulation -1 35114 35686
YP_009281673.1 NC_031031_p59 hypothetical protein phrog_2387 nucleotide kinase other -1 36573 37007
YP_009281686.1 NC_031031_p72 hypothetical protein phrog_762 unknown function unknown function -1 40601 41365
YP_009281615.1 NC_031031_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 430 1260
YP_009281708.1 NC_031031_p94 hypothetical protein phrog_2554 unknown function unknown function -1 49402 50130
YP_009281678.1 NC_031031_p64 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38115 38495
YP_009281655.1 NC_031031_p41 hypothetical protein phrog_13673 unknown function unknown function -1 27148 27381
YP_009281669.1 NC_031031_p55 hypothetical protein phrog_37922 unknown function unknown function -1 34787 34948
YP_009281709.1 NC_031031_p95 hypothetical protein phrog_6351 unknown function unknown function -1 50213 50599
YP_009281622.1 NC_031031_p8 hypothetical protein phrog_356 minor tail protein tail 1 4403 5071
YP_009281692.1 NC_031031_p78 hypothetical protein phrog_520 unknown function unknown function -1 43522 43800
YP_009281702.1 NC_031031_p88 hypothetical protein phrog_12613 unknown function unknown function -1 47996 48166
YP_009281625.1 NC_031031_p11 terminase phrog_9 terminase large subunit head and packaging 1 6647 8344
YP_009281681.1 NC_031031_p67 endonuclease VII phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism -1 39317 39685
YP_009281630.1 NC_031031_p16 hypothetical protein phrog_748 head-tail connector protein connector 1 12277 12447
YP_009281661.1 NC_031031_p47 hypothetical protein phrog_690 unknown function unknown function -1 30306 30533
YP_009281670.1 NC_031031_p56 hypothetical protein phrog_499 unknown function unknown function -1 34948 35130
YP_009281688.1 NC_031031_p74 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41920 42663
YP_009281674.1 NC_031031_p60 hypothetical protein phrog_4589 unknown function unknown function -1 37004 37180
YP_009281684.1 NC_031031_p70 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40010 40408
YP_009281694.1 NC_031031_p80 hypothetical protein phrog_1562 unknown function unknown function -1 44675 45073
YP_009281676.1 NC_031031_p62 hypothetical protein phrog_13334 unknown function unknown function -1 37443 37655
YP_009281633.1 NC_031031_p19 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 13009 13377
YP_009281637.1 NC_031031_p23 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 14909 15813
YP_009281689.1 NC_031031_p75 hypothetical protein phrog_2903 unknown function unknown function -1 42730 43125
YP_009281641.1 NC_031031_p27 minor tail protein phrog_110 minor tail protein tail 1 19057 20844
YP_009281711.1 NC_031031_p97 hypothetical protein phrog_13636 unknown function unknown function -1 50835 51017
YP_009281635.1 NC_031031_p21 head-to-tail connector protein phrog_123 tail terminator connector 1 13758 14168