| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031032 |
Definition |
Bacillus phage Stitch, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
DB of origin |
REFSEQ |
Length |
24320 |
Host Name |
Bacillus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
36 |
%GC |
30.36 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009281728.1 | NC_031032_p16 | hypothetical protein | phrog_803 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | -1 | 7832 | 8188 |
| YP_009281716.1 | NC_031032_p4 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 1488 | 1727 |
| YP_009281744.1 | NC_031032_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22430 | 22513 |
| YP_009281715.1 | NC_031032_p3 | dUTPase | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 1009 | 1491 |
| YP_009281730.1 | NC_031032_p18 | hypothetical protein | singleton | unknown function | unknown function | -1 | 8408 | 8518 |
| YP_009281735.1 | NC_031032_p23 | major head protein | phrog_2006 | major head protein | head and packaging | 1 | 11463 | 12791 |
| YP_009281717.1 | NC_031032_p5 | hypothetical protein | phrog_12799 | unknown function | unknown function | -1 | 1732 | 2202 |
| YP_009281719.1 | NC_031032_p7 | hypothetical protein | phrog_8992 | unknown function | unknown function | -1 | 2844 | 3440 |
| YP_009281720.1 | NC_031032_p8 | hypothetical protein | phrog_11443 | unknown function | unknown function | -1 | 3537 | 3677 |
| YP_009281739.1 | NC_031032_p27 | pre-neck protein appendage protein | phrog_7458 | tail spike protein | tail | 1 | 16876 | 19029 |
| YP_009281727.1 | NC_031032_p15 | hypothetical protein | phrog_374 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 7498 | 7746 |
| YP_009281733.1 | NC_031032_p21 | hypothetical protein | phrog_6370 | dsDNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 10184 | 10483 |
| YP_009281737.1 | NC_031032_p25 | upper collar connector | phrog_2038 | upper collar connector | connector | 1 | 14854 | 15807 |
| YP_009281740.1 | NC_031032_p28 | morphogenesis protein | phrog_9066 | endolysin | lysis | 1 | 19029 | 20267 |
| YP_009281748.1 | NC_031032_p36 | hypothetical protein | phrog_6682 | GP16.7-like replication protein | DNA, RNA and nucleotide metabolism | -1 | 23425 | 23859 |
| YP_009281718.1 | NC_031032_p6 | hypothetical protein | phrog_11122 | unknown function | unknown function | -1 | 2214 | 2711 |
| YP_009281721.1 | NC_031032_p9 | hypothetical protein | phrog_32220 | unknown function | unknown function | -1 | 3677 | 3805 |
| YP_009281742.1 | NC_031032_p30 | endolysin | phrog_291 | endolysin | lysis | 1 | 20454 | 21251 |
| YP_009281729.1 | NC_031032_p17 | hypothetical protein | phrog_12832 | unknown function | unknown function | -1 | 8200 | 8334 |
| YP_009281738.1 | NC_031032_p26 | lower collar protein | phrog_3225 | adaptor Ad4 | connector | 1 | 15794 | 16861 |
| YP_009281743.1 | NC_031032_p31 | DNA encapsidation ATPase | phrog_2150 | terminase | head and packaging | 1 | 21330 | 22430 |
| YP_009281732.1 | NC_031032_p20 | hypothetical protein | singleton | unknown function | unknown function | -1 | 9737 | 9925 |
| YP_009281723.1 | NC_031032_p11 | hypothetical protein | phrog_11729 | unknown function | unknown function | -1 | 3988 | 4314 |
| YP_009281736.1 | NC_031032_p24 | major tail protein | phrog_2248 | tail protein | tail | 1 | 13082 | 14851 |
| YP_009281714.1 | NC_031032_p2 | hypothetical protein | phrog_4472 | nucleotide kinase | other | -1 | 674 | 1009 |
| YP_009281734.1 | NC_031032_p22 | scaffold protein | phrog_11209 | head scaffolding protein | head and packaging | 1 | 11102 | 11404 |
| YP_009281726.1 | NC_031032_p14 | terminal protein | phrog_6358 | DNA terminal protein | DNA, RNA and nucleotide metabolism | -1 | 6542 | 7462 |
| YP_009281741.1 | NC_031032_p29 | hypothetical protein | phrog_4898 | holin | lysis | 1 | 20303 | 20452 |
| YP_009281747.1 | NC_031032_p35 | hypothetical protein | phrog_11289 | unknown function | unknown function | -1 | 23137 | 23424 |
| YP_009281724.1 | NC_031032_p12 | hypothetical protein | phrog_16566 | unknown function | unknown function | -1 | 4311 | 4442 |
| YP_009281745.1 | NC_031032_p33 | hypothetical protein | phrog_12011 | unknown function | unknown function | -1 | 22510 | 22695 |
| YP_009281722.1 | NC_031032_p10 | hypothetical protein | phrog_38568 | unknown function | unknown function | -1 | 3802 | 3984 |
| YP_009281731.1 | NC_031032_p19 | ssDNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 8568 | 8891 |
| YP_009281713.1 | NC_031032_p1 | hypothetical protein | phrog_8978 | unknown function | unknown function | -1 | 414 | 674 |
| YP_009281746.1 | NC_031032_p34 | hypothetical protein | phrog_8526 | unknown function | unknown function | -1 | 22698 | 22991 |
| YP_009281725.1 | NC_031032_p13 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 4454 | 6526 |