| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031035 |
Definition |
Mycobacterium phage Gengar, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
REFSEQ |
Length |
61626 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
95 |
%GC |
64.98 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009282309.1 | NC_031035_p63 | ATP-dependent DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 45778 | 47487 |
| YP_009282251.1 | NC_031035_p5 | terminase small subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1351 | 2778 |
| YP_009282325.1 | NC_031035_p79 | hypothetical protein | phrog_8575 | unknown function | unknown function | 1 | 53997 | 54230 |
| YP_009282295.1 | NC_031035_p49 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 38562 | 38840 |
| YP_009282313.1 | NC_031035_p67 | hypothetical protein | phrog_11424 | unknown function | unknown function | 1 | 49115 | 49282 |
| YP_009282258.1 | NC_031035_p12 | head-to-tail connector | phrog_763 | head-tail adaptor | connector | 1 | 9495 | 9857 |
| YP_009282301.1 | NC_031035_p55 | hypothetical protein | phrog_10500 | unknown function | unknown function | 1 | 41090 | 41314 |
| YP_009282315.1 | NC_031035_p69 | hypothetical protein | phrog_7217 | unknown function | unknown function | 1 | 50157 | 50408 |
| YP_009282269.1 | NC_031035_p23 | hypothetical protein | phrog_1736 | minor tail protein | tail | 1 | 20884 | 21201 |
| YP_009282263.1 | NC_031035_p17 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11303 | 11749 |
| YP_009282279.1 | NC_031035_p33 | nuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28953 | 30170 |
| YP_009282311.1 | NC_031035_p65 | DNA binding domain protein | phrog_908 | unknown function | unknown function | 1 | 47930 | 48778 |
| YP_009282338.1 | NC_031035_p92 | DNA binding domain protein | phrog_10342 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 59856 | 60245 |
| YP_009282249.1 | NC_031035_p3 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 542 | 772 |
| YP_009282288.1 | NC_031035_p42 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 34828 | 35022 |
| YP_009282339.1 | NC_031035_p93 | hypothetical protein | phrog_31576 | unknown function | unknown function | 1 | 60570 | 61004 |
| YP_009282278.1 | NC_031035_p32 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 28715 | 28969 |
| YP_009282335.1 | NC_031035_p89 | hypothetical protein | phrog_6842 | unknown function | unknown function | 1 | 58624 | 58953 |
| YP_009282266.1 | NC_031035_p20 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17520 | 19292 |
| YP_009282329.1 | NC_031035_p83 | hypothetical protein | phrog_3665 | unknown function | unknown function | 1 | 55837 | 55998 |
| YP_009282259.1 | NC_031035_p13 | head-to-tail connector | phrog_387 | neck protein | connector | 1 | 9829 | 10095 |
| YP_009282280.1 | NC_031035_p34 | hypothetical protein | phrog_16066 | unknown function | unknown function | 1 | 30170 | 30331 |
| YP_009282264.1 | NC_031035_p18 | tapemeasure protein | phrog_971 | endolysin | lysis | 1 | 12162 | 16271 |
| YP_009282308.1 | NC_031035_p62 | DnaB-like replicative helicase | phrog_10729 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 43622 | 45781 |
| YP_009282337.1 | NC_031035_p91 | hypothetical protein | phrog_8588 | unknown function | unknown function | 1 | 59416 | 59715 |
| YP_009282328.1 | NC_031035_p82 | hypothetical protein | phrog_16134 | unknown function | unknown function | 1 | 55538 | 55822 |
| YP_009282299.1 | NC_031035_p53 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 40069 | 40236 |
| YP_009282334.1 | NC_031035_p88 | hypothetical protein | phrog_7638 | unknown function | unknown function | 1 | 58044 | 58403 |
| YP_009282332.1 | NC_031035_p86 | DNA binding domain protein | phrog_10190 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 56716 | 57123 |
| YP_009282273.1 | NC_031035_p27 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 25053 | 25415 |
| YP_009282292.1 | NC_031035_p46 | DNA polymerase | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | 1 | 36820 | 37950 |
| YP_009282298.1 | NC_031035_p52 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 39794 | 40072 |
| YP_009282260.1 | NC_031035_p14 | head-to-tail connector | phrog_123 | tail terminator | connector | 1 | 10092 | 10514 |
| YP_009282324.1 | NC_031035_p78 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 53635 | 54000 |
| YP_009282253.1 | NC_031035_p7 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4277 | 7033 |
| YP_009282275.1 | NC_031035_p29 | lysin B | phrog_102 | endolysin | lysis | 1 | 27074 | 27946 |
| YP_009282285.1 | NC_031035_p39 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 32980 | 33822 |
| YP_009282319.1 | NC_031035_p73 | hypothetical protein | phrog_3868 | unknown function | unknown function | 1 | 51188 | 51751 |
| YP_009282282.1 | NC_031035_p36 | hypothetical protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30665 | 31123 |
| YP_009282290.1 | NC_031035_p44 | hypothetical protein | phrog_2286 | unknown function | unknown function | 1 | 35348 | 36106 |
| YP_009282306.1 | NC_031035_p60 | HNH endonuclease | phrog_10696 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42723 | 43214 |
| YP_009282322.1 | NC_031035_p76 | hypothetical protein | phrog_9980 | unknown function | unknown function | 1 | 52228 | 52893 |
| YP_009282252.1 | NC_031035_p6 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2791 | 4326 |
| YP_009282327.1 | NC_031035_p81 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 54864 | 55541 |
| YP_009282341.1 | NC_031035_p95 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61193 | 61498 |
| YP_009282262.1 | NC_031035_p16 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11303 | 12144 |
| YP_009282247.1 | NC_031035_p1 | hypothetical protein | phrog_10556 | unknown function | unknown function | 1 | 55 | 303 |
| YP_009282272.1 | NC_031035_p26 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 23958 | 25028 |
| YP_009282297.1 | NC_031035_p51 | DNA polymerase III | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 39018 | 39797 |
| YP_009282277.1 | NC_031035_p31 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 28392 | 28718 |
| YP_009282333.1 | NC_031035_p87 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 57248 | 57934 |
| YP_009282256.1 | NC_031035_p10 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7980 | 8912 |
| YP_009282304.1 | NC_031035_p58 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 41780 | 42370 |
| YP_009282323.1 | NC_031035_p77 | RNA ligase | phrog_14301 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 53045 | 53638 |
| YP_009282302.1 | NC_031035_p56 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 41311 | 41523 |
| YP_009282254.1 | NC_031035_p8 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 7030 | 7230 |
| YP_009282314.1 | NC_031035_p68 | DNA binding domain protein | phrog_2342 | unknown function | unknown function | 1 | 49279 | 50160 |
| YP_009282303.1 | NC_031035_p57 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 41577 | 41699 |
| YP_009282336.1 | NC_031035_p90 | hypothetical protein | phrog_6135 | unknown function | unknown function | 1 | 59055 | 59315 |
| YP_009282307.1 | NC_031035_p61 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43211 | 43591 |
| YP_009282287.1 | NC_031035_p41 | HTH DNA binding protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 34445 | 34831 |
| YP_009282305.1 | NC_031035_p59 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 42478 | 42726 |
| YP_009282261.1 | NC_031035_p15 | major tail protein | phrog_117 | major tail protein | tail | 1 | 10555 | 11166 |
| YP_009282283.1 | NC_031035_p37 | integrase | phrog_95 | integrase | integration and excision | 1 | 31346 | 32752 |
| YP_009282321.1 | NC_031035_p75 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 52022 | 52231 |
| YP_009282320.1 | NC_031035_p74 | hypothetical protein | phrog_5288 | unknown function | unknown function | 1 | 51762 | 52022 |
| YP_009282312.1 | NC_031035_p66 | hypothetical protein | phrog_5505 | unknown function | unknown function | 1 | 48864 | 49079 |
| YP_009282300.1 | NC_031035_p54 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 40233 | 41093 |
| YP_009282255.1 | NC_031035_p9 | scaffolding protein | phrog_4638 | head scaffolding protein | head and packaging | 1 | 7279 | 7908 |
| YP_009282268.1 | NC_031035_p22 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 19799 | 20884 |
| YP_009282331.1 | NC_031035_p85 | hypothetical protein | phrog_9985 | unknown function | unknown function | 1 | 56440 | 56715 |
| YP_009282284.1 | NC_031035_p38 | hypothetical protein | phrog_15740 | unknown function | unknown function | 1 | 32810 | 32950 |
| YP_009282316.1 | NC_031035_p70 | hypothetical protein | phrog_5135 | unknown function | unknown function | 1 | 50405 | 50740 |
| YP_009282265.1 | NC_031035_p19 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16348 | 17478 |
| YP_009282270.1 | NC_031035_p24 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 21185 | 23683 |
| YP_009282271.1 | NC_031035_p25 | hypothetical protein | phrog_10753 | unknown function | unknown function | 1 | 23696 | 23974 |
| YP_009282318.1 | NC_031035_p72 | hypothetical protein | phrog_5035 | unknown function | unknown function | 1 | 50944 | 51201 |
| YP_009282248.1 | NC_031035_p2 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 300 | 545 |
| YP_009282330.1 | NC_031035_p84 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 56110 | 56355 |
| YP_009282289.1 | NC_031035_p43 | hypothetical protein | phrog_11593 | unknown function | unknown function | 1 | 35101 | 35253 |
| YP_009282276.1 | NC_031035_p30 | holin | phrog_565 | holin | lysis | 1 | 27943 | 28395 |
| YP_009282274.1 | NC_031035_p28 | lysin A | phrog_317 | endolysin | lysis | 1 | 25443 | 27077 |
| YP_009282340.1 | NC_031035_p94 | hypothetical protein | phrog_10816 | unknown function | unknown function | 1 | 61017 | 61196 |
| YP_009282281.1 | NC_031035_p35 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 30285 | 30542 |
| YP_009282267.1 | NC_031035_p21 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 19293 | 19802 |
| YP_009282286.1 | NC_031035_p40 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 33946 | 34347 |
| YP_009282250.1 | NC_031035_p4 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 1131 | 1358 |
| YP_009282257.1 | NC_031035_p11 | head-to-tail connector | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 9112 | 9495 |
| YP_009282293.1 | NC_031035_p47 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 37992 | 38330 |
| YP_009282294.1 | NC_031035_p48 | hypothetical protein | phrog_9124 | unknown function | unknown function | 1 | 38335 | 38565 |
| YP_009282326.1 | NC_031035_p80 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 54230 | 54871 |
| YP_009282291.1 | NC_031035_p45 | hypothetical protein | phrog_2781 | unknown function | unknown function | 1 | 36147 | 36782 |
| YP_009282296.1 | NC_031035_p50 | hypothetical protein | phrog_10462 | unknown function | unknown function | 1 | 38837 | 38989 |
| YP_009282310.1 | NC_031035_p64 | holliday-junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47565 | 47930 |
| YP_009282317.1 | NC_031035_p71 | hypothetical protein | phrog_2869 | unknown function | unknown function | 1 | 50725 | 50934 |