Genomic map of Lactobacillus phage PLE2 (NC_031036)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031036
Definition
Lactobacillus phage PLE2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
35068
Host Name
Lactobacillus casei
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
45.32
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009282357.1 NC_031036_p16 distal tail protein phrog_33 distal tail protein Dit tail 1 11514 12209
YP_009282372.1 NC_031036_p31 hypothetical protein phrog_373 anti-repressor transcription regulation 1 24427 25200
YP_009282351.1 NC_031036_p10 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 6591 6974
YP_009282382.1 NC_031036_p41 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 28749 29489
YP_009282356.1 NC_031036_p15 tape measure protein phrog_58 tail length tape measure protein tail 1 8337 11507
YP_009282359.1 NC_031036_p18 hypothetical protein phrog_1401 unknown function unknown function 1 16587 17063
YP_009282347.1 NC_031036_p6 hypothetical protein phrog_1696 major tail protein tail 1 5423 5671
YP_009282366.1 NC_031036_p25 hypothetical protein phrog_7805 unknown function unknown function -1 21111 21872
YP_009282344.1 NC_031036_p3 portal protein phrog_12 portal protein head and packaging 1 2195 3430
YP_009282376.1 NC_031036_p35 hypothetical protein phrog_2211 unknown function unknown function -1 25823 26134
YP_009282392.1 NC_031036_p51 hypothetical protein phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 34688 35068
YP_009282363.1 NC_031036_p22 holin phrog_2609 holin lysis 1 17953 18414
YP_009282345.1 NC_031036_p4 capsid maduration protease phrog_94 head maturation protease head and packaging 1 3408 4115
YP_009282368.1 NC_031036_p27 hypothetical protein phrog_7872 unknown function unknown function -1 22377 23156
YP_009282378.1 NC_031036_p37 hypothetical protein phrog_17254 unknown function unknown function 1 26400 26639
YP_009282384.1 NC_031036_p43 hypothetical protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 30068 30865
YP_009282364.1 NC_031036_p23 lysin phrog_3393 endolysin lysis 1 18416 19468
YP_009282350.1 NC_031036_p9 hypothetical protein phrog_78 tail terminator connector 1 6272 6601
YP_009282360.1 NC_031036_p19 hypothetical protein phrog_2566 unknown function unknown function 1 17066 17335
YP_009282346.1 NC_031036_p5 major capsid protein phrog_10 major head protein head and packaging 1 4120 5349
YP_009282390.1 NC_031036_p49 hypothetical protein phrog_17171 unknown function unknown function 1 33868 34122
YP_009282353.1 NC_031036_p12 major tail S protein phrog_88 major tail protein tail 1 6986 7633
YP_009282383.1 NC_031036_p42 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 29492 30001
YP_009282385.1 NC_031036_p44 helicase phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism 1 30855 32105
YP_009282391.1 NC_031036_p50 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 34119 34523
YP_009282380.1 NC_031036_p39 hypothetical protein phrog_5118 unknown function unknown function 1 27150 27380
YP_009282386.1 NC_031036_p45 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 32380 32694
YP_009282358.1 NC_031036_p17 tail associated lysozyme phrog_1330 tail protein tail 1 12206 16609
YP_009282342.1 NC_031036_p1 hypothetical protein phrog_1066 unknown function unknown function 1 57 443
YP_009282387.1 NC_031036_p46 hypothetical protein phrog_2044 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 1 32701 32985
YP_009282375.1 NC_031036_p34 hypothetical protein phrog_3882 unknown function unknown function 1 25700 25834
YP_009282354.1 NC_031036_p13 tail assembly chaperone phrog_4888 tail assembly chaperone tail 1 7710 8317
YP_009282388.1 NC_031036_p47 hypothetical protein phrog_13069 unknown function unknown function 1 32972 33301
YP_009282379.1 NC_031036_p38 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 26644 27138
YP_009282349.1 NC_031036_p8 head-tail joining protein phrog_4014 head-tail adaptor connector 1 6001 6288
YP_009282369.1 NC_031036_p28 hypothetical protein phrog_87 metallo-protease other -1 23228 23632
YP_009282389.1 NC_031036_p48 hypothetical protein phrog_1891 HNH endonuclease DNA, RNA and nucleotide metabolism 1 33294 33881
YP_009282361.1 NC_031036_p20 hypothetical protein phrog_4325 holin lysis 1 17383 17769
YP_009282352.1 NC_031036_p11 major tail L protein phrog_88 major tail protein tail 1 6986 7695
YP_009282370.1 NC_031036_p29 transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 23629 23955
YP_009282362.1 NC_031036_p21 hypothetical protein phrog_3671 unknown function unknown function 1 17750 17956
YP_009282365.1 NC_031036_p24 integrase phrog_1 integrase integration and excision -1 19849 21000
YP_009282343.1 NC_031036_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 446 2176
YP_009282367.1 NC_031036_p26 hypothetical protein phrog_9771 unknown function unknown function 1 21891 22121
YP_009282373.1 NC_031036_p32 hypothetical protein phrog_823 unknown function unknown function 1 25232 25555
YP_009282355.1 NC_031036_p14 tail assembly chaperone phrog_4888 tail assembly chaperone tail 1 7710 8075
YP_009282348.1 NC_031036_p7 hypothetical protein phrog_4609 unknown function unknown function 1 5685 6011
YP_009282377.1 NC_031036_p36 hypothetical protein phrog_5144 unknown function unknown function 1 26195 26386
YP_009282374.1 NC_031036_p33 hypothetical protein phrog_7103 unknown function unknown function 1 25555 25686
YP_009282381.1 NC_031036_p40 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 27380 28747
YP_009282371.1 NC_031036_p30 hypothetical protein phrog_21847 unknown function unknown function 1 24212 24424