Genomic map of Lactococcus phage 50101 (NC_031040)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_031040
Definition
Lactococcus phage 50101, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
31987
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
35.61
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009283198.1 NC_031040_p2 Sie protein phrog_8545 superinfection exclusion Sie-like moron, auxiliary metabolic gene and host takeover -1 1246 1767
YP_009283216.1 NC_031040_p20 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 10663 11082
YP_009283213.1 NC_031040_p17 hypothetical protein phrog_4149 unknown function unknown function 1 9055 9648
YP_009283210.1 NC_031040_p14 resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 8130 8531
YP_009283245.1 NC_031040_p49 lysin phrog_291 endolysin lysis 1 29225 30514
YP_009283202.1 NC_031040_p6 antirepressor phrog_373 anti-repressor transcription regulation 1 3373 4083
YP_009283227.1 NC_031040_p31 hypothetical protein phrog_2494 minor head protein head and packaging 1 15578 16342
YP_009283217.1 NC_031040_p21 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 11101 11631
YP_009283219.1 NC_031040_p23 hypothetical protein phrog_1083 unknown function unknown function 1 11872 12210
YP_009283233.1 NC_031040_p37 hypothetical protein phrog_501 head closure Hc1 connector 1 19931 20278
YP_009283212.1 NC_031040_p16 hypothetical protein phrog_4314 unknown function unknown function 1 8886 9062
YP_009283205.1 NC_031040_p9 transcriptional regulator phrog_4416 transcriptional regulator transcription regulation 1 4675 4848
YP_009283226.1 NC_031040_p30 hypothetical protein phrog_25292 unknown function unknown function 1 15406 15564
YP_009283231.1 NC_031040_p35 hypothetical protein phrog_1539 Arc-like repressor transcription regulation 1 19254 19553
YP_009283247.1 NC_031040_p51 hypothetical protein phrog_11039 unknown function unknown function 1 31513 31767
YP_009283218.1 NC_031040_p22 transcription factor phrog_22202 transcription factor transcription regulation 1 11609 11875
YP_009283237.1 NC_031040_p41 hypothetical protein phrog_1526 unknown function unknown function 1 21489 21749
YP_009283244.1 NC_031040_p48 holin phrog_297 holin lysis 1 28962 29228
YP_009283241.1 NC_031040_p45 tail-associated lysin phrog_538 minor tail protein tail 1 25583 26740
YP_009283229.1 NC_031040_p33 scaffold protein phrog_233 head scaffolding protein head and packaging 1 17875 18339
YP_009283228.1 NC_031040_p32 large terminase subunit phrog_9 terminase large subunit head and packaging 1 16393 17802
YP_009283230.1 NC_031040_p34 major head protein phrog_10 major head protein head and packaging 1 18343 19239
YP_009283238.1 NC_031040_p42 hypothetical protein phrog_1633 unknown function unknown function 1 21764 22138
YP_009283225.1 NC_031040_p29 portal protein phrog_104 portal protein head and packaging 1 14180 15409
YP_009283239.1 NC_031040_p43 tape measure protein phrog_58 tail length tape measure protein tail 1 22138 24669
YP_009283224.1 NC_031040_p28 hypothetical protein phrog_26495 unknown function unknown function 1 14023 14187
YP_009283215.1 NC_031040_p19 hypothetical protein phrog_6648 unknown function unknown function 1 10271 10666
YP_009283243.1 NC_031040_p47 neck passage structure phrog_16048 virion structural protein head and packaging 1 27828 28937
YP_009283199.1 NC_031040_p3 Cl-like repressor phrog_4 transcriptional repressor transcription regulation -1 1828 2688
YP_009283234.1 NC_031040_p38 hypothetical protein phrog_387 neck protein connector 1 20271 20507
YP_009283203.1 NC_031040_p7 hypothetical protein phrog_823 unknown function unknown function 1 4096 4428
YP_009283204.1 NC_031040_p8 hypothetical protein phrog_5257 unknown function unknown function 1 4430 4678
YP_009283232.1 NC_031040_p36 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 19555 19953
YP_009283197.1 NC_031040_p1 integrase phrog_1 integrase integration and excision -1 1 1125
YP_009283206.1 NC_031040_p10 recombinase protein phrog_252 Bet-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 4949 5686
YP_009283200.1 NC_031040_p4 repressor phrog_4416 transcriptional regulator transcription regulation 1 2917 3108
YP_009283246.1 NC_031040_p50 hypothetical protein phrog_31950 unknown function unknown function 1 30915 31496
YP_009283211.1 NC_031040_p15 hypothetical protein phrog_3109 unknown function unknown function 1 8535 8774
YP_009283236.1 NC_031040_p40 major tail protein phrog_117 major tail protein tail 1 20854 21411
YP_009283221.1 NC_031040_p25 transcriptional regulator phrog_8 transcriptional regulator transcription regulation 1 12524 13060
YP_009283214.1 NC_031040_p18 hypothetical protein phrog_121 unknown function unknown function 1 9702 10274
YP_009283208.1 NC_031040_p12 replicase protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 7018 7896
YP_009283235.1 NC_031040_p39 hypothetical protein phrog_123 tail terminator connector 1 20508 20843
YP_009283207.1 NC_031040_p11 hypothetical protein phrog_674 unknown function unknown function 1 5688 6728
YP_009283222.1 NC_031040_p26 transcriptional activator phrog_36 transcriptional regulator transcription regulation 1 13144 13575
YP_009283220.1 NC_031040_p24 hypothetical protein phrog_11381 unknown function unknown function 1 12207 12527
YP_009283209.1 NC_031040_p13 hypothetical protein phrog_7699 unknown function unknown function 1 7880 8137
YP_009283240.1 NC_031040_p44 distal tail protein phrog_33 distal tail protein Dit tail 1 24682 25578
YP_009283223.1 NC_031040_p27 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 13701 14033
YP_009283201.1 NC_031040_p5 Cro/Cl-like repressor phrog_3 transcriptional repressor transcription regulation 1 3129 3359
YP_009283242.1 NC_031040_p46 receptor binding protein phrog_1220 head protein head and packaging 1 26737 27768