| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_031044 |
Definition |
Lactococcus phage M6165, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Ceduovirus. |
DB of origin |
REFSEQ |
Length |
22179 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
37 |
%GC |
35.73 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009283762.1 | NC_031044_p26 | tail fibers protein | phrog_2634 | major tail protein | tail | 1 | 12078 | 12695 |
| YP_009283754.1 | NC_031044_p18 | hypothetical protein | phrog_1284 | unknown function | unknown function | -1 | 5796 | 6695 |
| YP_009283760.1 | NC_031044_p24 | capsid and scaffold protein | phrog_3270 | head maturation protease | head and packaging | 1 | 9895 | 11337 |
| YP_009283756.1 | NC_031044_p20 | hypothetical protein | phrog_10074 | unknown function | unknown function | 1 | 7724 | 7873 |
| YP_009283753.1 | NC_031044_p17 | DNA polymerase | phrog_10577 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 5345 | 5725 |
| YP_009283755.1 | NC_031044_p19 | hypothetical protein | phrog_10138 | unknown function | unknown function | -1 | 6697 | 6897 |
| YP_009283748.1 | NC_031044_p12 | transcriptional regulator | phrog_10808 | transcriptional regulator | transcription regulation | -1 | 3741 | 3926 |
| YP_009283767.1 | NC_031044_p31 | hypothetical protein | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15472 | 15759 |
| YP_009283765.1 | NC_031044_p29 | hypothetical protein | phrog_10523 | unknown function | unknown function | 1 | 13210 | 13614 |
| YP_009283745.1 | NC_031044_p9 | hypothetical protein | phrog_10559 | unknown function | unknown function | -1 | 3100 | 3252 |
| YP_009283758.1 | NC_031044_p22 | N-acetylmuramoyl-L-alanine amidase | phrog_7 | endolysin | lysis | 1 | 8400 | 9095 |
| YP_009283738.1 | NC_031044_p2 | hypothetical protein | phrog_10769 | unknown function | unknown function | -1 | 436 | 810 |
| YP_009283763.1 | NC_031044_p27 | hypothetical protein | phrog_10561 | unknown function | unknown function | 1 | 12768 | 13022 |
| YP_009283769.1 | NC_031044_p33 | hypothetical protein | phrog_10033 | unknown function | unknown function | 1 | 17327 | 17626 |
| YP_009283749.1 | NC_031044_p13 | hypothetical protein | phrog_3530 | unknown function | unknown function | -1 | 3940 | 4380 |
| YP_009283743.1 | NC_031044_p7 | hypothetical protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 2125 | 2496 |
| YP_009283771.1 | NC_031044_p35 | capsid and scaffold protein | phrog_10067 | virion structural protein | head and packaging | 1 | 19505 | 20521 |
| YP_009283757.1 | NC_031044_p21 | hypothetical protein | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 7884 | 8369 |
| YP_009283759.1 | NC_031044_p23 | capsid and scaffold protein | phrog_10159 | virion structural protein | head and packaging | 1 | 9105 | 9944 |
| YP_009283770.1 | NC_031044_p34 | hypothetical protein | phrog_10648 | unknown function | unknown function | 1 | 17619 | 19505 |
| YP_009283772.1 | NC_031044_p36 | capsid and scaffold protein | phrog_10326 | virion structural protein | head and packaging | 1 | 20514 | 21707 |
| YP_009283740.1 | NC_031044_p4 | hypothetical protein | phrog_10525 | unknown function | unknown function | -1 | 1127 | 1450 |
| YP_009283773.1 | NC_031044_p37 | holin | phrog_9407 | holin | lysis | 1 | 21729 | 22019 |
| YP_009283741.1 | NC_031044_p5 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 1451 | 1951 |
| YP_009283739.1 | NC_031044_p3 | hypothetical protein | phrog_10148 | unknown function | unknown function | -1 | 832 | 1134 |
| YP_009283752.1 | NC_031044_p16 | hypothetical protein | phrog_10596 | unknown function | unknown function | -1 | 4956 | 5345 |
| YP_009283747.1 | NC_031044_p11 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 3524 | 3769 |
| YP_009283761.1 | NC_031044_p25 | hypothetical protein | phrog_10227 | unknown function | unknown function | 1 | 11356 | 12060 |
| YP_009283746.1 | NC_031044_p10 | hypothetical protein | phrog_11155 | unknown function | unknown function | -1 | 3321 | 3524 |
| YP_009283742.1 | NC_031044_p6 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 1948 | 2112 |
| YP_009283750.1 | NC_031044_p14 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 4377 | 4727 |
| YP_009283766.1 | NC_031044_p30 | tail length tape-measure protein | phrog_9145 | tail length tape measure protein | tail | 1 | 13607 | 15475 |
| YP_009283737.1 | NC_031044_p1 | transcriptional regulator | phrog_12561 | transcriptional regulator | transcription regulation | -1 | 265 | 435 |
| YP_009283768.1 | NC_031044_p32 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 15771 | 17327 |
| YP_009283744.1 | NC_031044_p8 | essential recombination function protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 2561 | 3100 |
| YP_009283764.1 | NC_031044_p28 | hypothetical protein | phrog_12461 | unknown function | unknown function | 1 | 13064 | 13234 |
| YP_009283751.1 | NC_031044_p15 | hypothetical protein | phrog_9988 | unknown function | unknown function | -1 | 4727 | 4900 |